Cyclopterus lumpus (lumpfish): 117729671
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Entry
117729671 CDS
T09199
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117729671 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117729671 (grin3bb)
04082 Neuroactive ligand signaling
117729671 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117729671 (grin3bb)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Glutamate (ionotropic)
117729671 (grin3bb)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117729671
NCBI-ProteinID:
XP_034386848
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Position
4:complement(28074304..28118868)
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AA seq
1205 aa
AA seq
DB search
MSFTSSWSWSWSWSRTLLILLLLQLLPPSLLHPQPCPLLARIGHTVRVGALLPAQRAARV
QVQAALRRAAATMSRDQHRDRDRERDNFLPYNLSLELVSRQPAAADPDSVFRCVCQGVVV
QRVSAVLAFPQSRDELLQVDFLASFLEIPFLSVIENGESLHTQNRFHLQMALGVPESGLS
NLLLTVLQRSGWKEGTVILCRGWEEARGLLRLLDSGSWSGASCDSEGRVSWHVRALLNLT
QSAHDDTQIHDFLFRHFRQKQPSSASVLLFGADPQCTAAVLRSAQDLGLTLPMVHWVLGQ
PLSPDALHAIGLPLGLLAYGEVERKPLDFYVSDALQLVTRAIAAATLVRPDLALIQNVVN
CYDKPNKHQVPSSGQYLSRFLSNTSFSGLTGPVRVHQNRSQVLTSQRFRIWSLRRDALGQ
PTWVTVGSWEGGQLQVEDQGIWQGPKPRHRTDDMSGRTRGRWRPGMPVVGSRVRVVTLVE
HPFVFTRDVDEEGSCPAGQYCLDASTNSSETLEKFFREVAGGNSSFLPAEHSKCCYGYCI
DLLEKLSEDLGFEFDLYIVGDGKYGALKGGRWTGLVGDLLNELADMAVTSFSINSARSRV
IDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITALFLTLYEWKSPY
GMTPHGRNRVRVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYT
ANLAAVMVGEKTFEEVSGIHDAKLHHPSRGFRFGTVRESSAEDYMKKSFPEMHEYMRRFN
EPTTPEGVATLKTDPPKLDAFIMDKALLDYEVSIDADCKMATVGKPFAIEGYGIGLPRNS
PLTSNISDFISRYKSEGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFMLLCVG
VGGALLTLAGEHGFYQLVLPHIRRRQNLKYWLHTSQKIHRALNMTYEDVKRQRAEKEKSC
NLQKPPPPSGPPAPPAPGASAKWNNEAIKDATATAAAKDARDFKQVHFNLETLNTRRLLA
RIATSEAKGCGAKSEGRGPAKPKAGPNSRLCENGGPVASLASLLLSRPSSSSSSASSVQL
NTSATPSVNVAPPPAAVAPHHTGELQELQEQIDQMREKLRTALARRAEIQTTLAKPALTV
PNPSAVTTMPTTTAPTAGAPPNAPPVITQISPFPTNTKCVTTMTDPPHKVLSKVQPLHSR
LTNQR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcacctcctcctggtcctggtcctggtcctggtcccggactctcctgatcttg
ctccttctccagctcctgccgccgagcctcctccacccgcagccgtgccccctcctggct
cggatcggacacactgtgagagtgggtgcgctcctgccggcgcagcgggcggctcgcgtg
caggtccaggcggcgctgagacgcgcagcagccacaatgagcagggaccaacaccgggac
cgggaccgggagagggacaactttctgccctacaacttgagtctggagctggtttcccgg
cagccggccgccgcggacccggattccgtgttccggtgcgtgtgtcagggcgtggtggtg
cagcgagtgtccgccgtcctcgccttcccacagagccgcgacgagctgctgcaggtggac
ttcctagcctcgttcctggagatcccgttcctcagcgtcattgagaacggagagtcgctc
catacacagaaccggtttcaccttcagatggcattgggggttccagagtccggtctgtcc
aacctgttgctgacggttctgcagcggtctggttggaaggagggtaccgtgatactgtgt
cgaggctgggaggaggctcggggtctcctgcggctgctggacagtgggagttggagtggt
gcatcatgcgacagtgagggcagagttagctggcacgtgcgtgccctcctgaacctgaca
cagtcggcacatgacgacactcagatccacgacttcctcttccgacacttccgacagaag
cagccctcgtcggcgtcggtgctgctgttcggagcggacccccagtgcacggcggcagta
ctgcgcagcgctcaggatctgggcctcacgttacccatggtgcactgggtgttgggccag
cccctcagccccgacgctctgcacgccatcgggctgcctctcggcctgctggcctatggg
gaggttgagaggaaaccgctcgacttctacgtcagtgatgccttgcagctcgtcaccagg
gccatcgccgctgcaaccttggtgaggccggacctggctcttatccagaacgtggtgaac
tgctatgacaaacccaacaaacaccaggtgccgtcctccggacagtacctgtccaggttc
ctgtccaacacgtctttctccggtctcacaggtccagtccgagtgcaccagaacaggtct
caggtcctaacctcgcagcgtttccgcatctggagcttgcgacgggacgcactgggtcag
cccacctgggtgacggtgggcagttgggagggaggccagctgcaggtggaggaccaggga
atctggcagggacccaaacctcgccacagaacagatgacatgagcgggaggacaaggggc
cgctggaggccgggaatgccggtggtggggagtcgggttcgggtggtcactctggtggaa
catcccttcgttttcactcgggacgtggacgaagaagggagctgcccggccgggcagtac
tgcctggacgccagcaccaacagctcggaaactttggagaaattcttcagggaagtggcc
ggcgggaacagcagcttcctgcctgcagagcacagcaagtgctgctacggatactgcatc
gacctgctggagaaactttccgaggacctgggcttcgaatttgacctctacatcgttgga
gacgggaagtacggcgctttgaagggggggcgctggaccgggcttgtgggagatcttctg
aatgaactggcagatatggccgtaacctcttttagtattaactccgctcggagccgggtg
attgacttcacctcacccttcttctccaccagcctgggcatcctggtgcgcagcaaggac
accgcggcccccattggagccttcatgtggcccttgcactggtccatgtgggtaggcatc
ttcctggcgctgcacatcaccgctctctttctcacgctgtacgagtggaagagtccatac
ggcatgacgcctcacggacgtaacagggtgagagtgttttcatactcgtctgctctcaac
ctgtgctacgccatcctgttcggacgcaccgtctcctccaagacgccaaagtgttggaca
ggtcggtttctgatgaacttgtgggccatcttttgcctgctagtgctgtccagctacacc
gccaaccttgccgcagtcatggtgggggagaagacctttgaggaggtgtcaggaatccac
gacgccaagctgcatcacccgtcccgtgggttccgctttgggacggtgagggagagcagt
gcggaggactacatgaagaagagctttcctgagatgcacgagtacatgaggcgcttcaac
gagcccacgacacctgaaggagtcgccaccctcaagacggatccccccaagctggacgct
ttcatcatggacaaagctctgctggattacgaggtttccatcgacgctgactgtaaaatg
gcaaccgtcgggaaaccgtttgcaatcgaaggttatggaatcggtcttcctcggaactcc
cctctgacatccaacatctcagacttcatcagcaggtataaatctgaaggctacatggat
ctcctgcacgacaagtggtacaaagtggttccgtgtgggaaccgagtgttcgccgtcacc
gagactcttcagatggggatcagtcacttctcgggactcttcatgttgttgtgcgttgga
gtgggcggagctttgctgactctggcaggtgaacacggtttctaccagctcgtcctgcca
cacatccgccgccgacagaacctcaaatactggcttcatacctcacagaaaatccatcga
gctctgaacatgacgtatgaagacgtaaagaggcagcgagctgagaaagagaaaagctgt
aacctgcagaagcctccgcccccttccggccctcctgctccgccggcccccggagcctcg
gccaagtggaataatgaggccattaaggatgccaccgccactgccgctgctaaggacgcc
cgagacttcaaacaagtccactttaaccttgagaccctcaacacccgccgcctgctcgct
cgcatcgccacttctgaagccaagggatgtggggccaaatctgaagggcggggaccagcc
aagccaaaggcggggccaaacagcagactctgtgagaacggaggaccggtggcttcactt
gccagcctgctcctttcccgaccctcatcatcctcctcttctgcttcctctgtccaactc
aatacctctgcaactccctctgttaatgtagcacccccccctgcagcggtggctccacac
cacaccggtgagctgcaggagctgcaggaacagatcgaccagatgagggagaagctgagg
acggctcttgccaggagggcagagatccagaccactctagccaaacctgccctcacagta
cccaacccatctgcagttaccacaatgccaacaactacagcaccaacggcaggagcccca
cccaacgccccgcccgtcatcacccagatatcacccttccctaccaacacgaagtgcgtg
acgaccatgacggacccacctcacaaagtcttgtccaaagtccagcccctccacagcaga
ctgaccaatcagaggtga
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