KEGG   Cyclopterus lumpus (lumpfish): 117729697
Entry
117729697         CDS       T09199                                 
Symbol
her6
Name
(RefSeq) hairy-related 6
  KO
K06054  hairy and enhancer of split 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03460  Fanconi anemia pathway
clum04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117729697 (her6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    117729697 (her6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clum03000]
    117729697 (her6)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117729697 (her6)
Transcription factors [BR:clum03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    117729697 (her6)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     117729697 (her6)
SSDB
Motif
Pfam: Hairy_orange HLH bHLH_NCOA Spectrin_1st_PEPL
Other DBs
NCBI-GeneID: 117729697
NCBI-ProteinID: XP_034386904
Ensembl: ENSCLMG00005009768
UniProt: A0A8C2XJ13
LinkDB
Position
4:complement(16697559..16699333)
AA seq 275 aa
MPSDMMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHQHQLPSVGPTHPSFGQPMQ
IPSSSPQVLPMNPVSCKGGSSPANLPSDGTKVYGGFQIVPATDGQFAFLIPNAAFAPNGP
VIPVYANNVSTPVPLPAAVSPGAPSGNADSVWRPW
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccttccgatatgatggaaaaaacgtcctcctctccggtcgctgcaacccctgcaagc
atgaacacaactcccgataaacccaagacagcatctgagcacagaaagtcatccaagcca
ataatggaaaagaggagaagagccagaatcaacgagagcttggggcagctgaaaactctc
atcctggatgcgctcaaaaaagatagctccagacactctaaactggagaaagcggacatc
ctggagatgacggtgaagcatctccggaacctccagagggctcagatgaccgctgctctg
aacaccgaccccactgtcttgggaaaatatcgcgccggtttcagcgagtgcatgaacgaa
gtcacccggttcctgtccacctgcgaaggtgtcaacaccgaggtcagaacgcggctcctc
ggccacttggccagctgcatgacccagatcaacgcgatgaactaccccagccagcaccaa
caccaacaccagctcccctccgtcggaccaacccacccctccttcggccagcccatgcag
atccccagctcatccccgcaggtcctgcccatgaacccggtgtcctgtaaaggaggttcg
tcgccggctaatttaccatcggacggcacaaaagtctacggcggtttccagatcgtgcca
gcgacagacggacagtttgcattcctcatacctaacgcggcgtttgcgccaaacggcccc
gttatccccgtttacgccaataacgtcagcacaccggtccctctaccggctgcggtttcc
cccggagccccgtcgggtaacgcggactcggtgtggcgaccctggtga

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