Cyclopterus lumpus (lumpfish): 117729697
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Entry
117729697 CDS
T09199
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03460
Fanconi anemia pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117729697 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117729697 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117729697 (her6)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117729697 (her6)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117729697 (her6)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
117729697 (her6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
117729697
NCBI-ProteinID:
XP_034386904
Ensembl:
ENSCLMG00005009768
UniProt:
A0A8C2XJ13
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All DBs
Position
4:complement(16697559..16699333)
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AA seq
275 aa
AA seq
DB search
MPSDMMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHQHQLPSVGPTHPSFGQPMQ
IPSSSPQVLPMNPVSCKGGSSPANLPSDGTKVYGGFQIVPATDGQFAFLIPNAAFAPNGP
VIPVYANNVSTPVPLPAAVSPGAPSGNADSVWRPW
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgatatgatggaaaaaacgtcctcctctccggtcgctgcaacccctgcaagc
atgaacacaactcccgataaacccaagacagcatctgagcacagaaagtcatccaagcca
ataatggaaaagaggagaagagccagaatcaacgagagcttggggcagctgaaaactctc
atcctggatgcgctcaaaaaagatagctccagacactctaaactggagaaagcggacatc
ctggagatgacggtgaagcatctccggaacctccagagggctcagatgaccgctgctctg
aacaccgaccccactgtcttgggaaaatatcgcgccggtttcagcgagtgcatgaacgaa
gtcacccggttcctgtccacctgcgaaggtgtcaacaccgaggtcagaacgcggctcctc
ggccacttggccagctgcatgacccagatcaacgcgatgaactaccccagccagcaccaa
caccaacaccagctcccctccgtcggaccaacccacccctccttcggccagcccatgcag
atccccagctcatccccgcaggtcctgcccatgaacccggtgtcctgtaaaggaggttcg
tcgccggctaatttaccatcggacggcacaaaagtctacggcggtttccagatcgtgcca
gcgacagacggacagtttgcattcctcatacctaacgcggcgtttgcgccaaacggcccc
gttatccccgtttacgccaataacgtcagcacaccggtccctctaccggctgcggtttcc
cccggagccccgtcgggtaacgcggactcggtgtggcgaccctggtga
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