KEGG   Cyclopterus lumpus (lumpfish): 117729761
Entry
117729761         CDS       T09199                                 
Name
(RefSeq) ras-related protein Rab-8A
  KO
K07901  Ras-related protein Rab-8A
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04140  Autophagy - animal
clum04144  Endocytosis
clum04530  Tight junction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117729761
   04140 Autophagy - animal
    117729761
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117729761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117729761
   03036 Chromosome and associated proteins [BR:clum03036]
    117729761
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117729761
   04031 GTP-binding proteins [BR:clum04031]
    117729761
Membrane trafficking [BR:clum04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    117729761
 Autophagy
  Other autophagy associated proteins
    117729761
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    117729761
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117729761
  Exosomal proteins of other body fluids (saliva and urine)
   117729761
  Exosomal proteins of colorectal cancer cells
   117729761
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    117729761
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB MMR_HSR1 DUF3963 Septin AAA_7 Tor_FN3_2nd
Other DBs
NCBI-GeneID: 117729761
NCBI-ProteinID: XP_034387007
Ensembl: ENSCLMG00005013330
LinkDB
Position
4:complement(20008639..20014481)
AA seq 206 aa
MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQ
IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMVLG
NKCDFNDKRQVSKDKGEKLALEYGIKFMETSAKANINVENAFLTLARDIKGKMDKKLEGN
NPQGSNQGVKITEQPKKSSFFRCTLL
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgaagacttacgattacttgtttaaacttcttttaatcggcgattcaggcgtcggg
aagacctgcgtgcttttcagattttcagaagatgccttcaactcaacgtttatctccact
ataggtattgatttcaagatcagaacaatagagttagatggaaagaagatcaagctacag
atatgggatacagcaggacaagagcggttcaggaccatcacgacagcctactacagggga
gccatgggcatcatgttagtgtatgacattaccaatgagaagtcttttgacaacatcaag
aactggatacggaatatagaagagcatgcctcagcagatgtggaaaggatggtccttggg
aacaaatgtgatttcaatgacaagcgacaggtgtccaaagacaaaggagagaagctggcg
ctggagtacggtatcaagttcatggaaaccagtgcaaaggcgaacatcaacgtcgagaat
gccttcttaacccttgccagagacattaaaggaaaaatggacaagaagctggagggcaat
aacccgcaaggcagcaatcaaggagtaaagattacagaacaacccaagaagagcagtttc
ttccgctgcacgctcctttga

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