KEGG   Cyclopterus lumpus (lumpfish): 117729798
Entry
117729798         CDS       T09199                                 
Symbol
si:ch73-61d6.3
Name
(RefSeq) occludin
  KO
K06088  occludin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03272  Virion - Hepatitis viruses
clum04382  Cornified envelope formation
clum04514  Cell adhesion molecules
clum04530  Tight junction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    117729798 (si:ch73-61d6.3)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117729798 (si:ch73-61d6.3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117729798 (si:ch73-61d6.3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    117729798 (si:ch73-61d6.3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117729798 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:clum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117729798 (si:ch73-61d6.3)
SSDB
Motif
Pfam: Occludin_ELL MARVEL Spectrin_Anc-1 DASH_Dad1 Tex_YqgF DUF7179 FapA
Other DBs
NCBI-GeneID: 117729798
NCBI-ProteinID: XP_034387057
Ensembl: ENSCLMG00005021593
LinkDB
Position
4:13075923..13092288
AA seq 552 aa
MFDKQHYESPPVYSPPFSSPSNNGFGPPGSFHTPQSEYNAYPPPPGSYYIEDKPQLFYKW
LSPPGIIKAMMATVIVLSVAIFACVASTLMWDMQYGMGMGMGYGGGYGGGGYGGGGYGGG
GYGGGSYGSGYGGYGGGYGNSHGSYISPYSAKTTMIAMAAINFIGALAFFITSFSKSNTV
RSRKFFLALMIASIIMAILQGIISIVYIVGVNPMAQGSSSMMYNPMLMMCQNLYQTSSYS
QMGGVGGFPMYNQYLYHYCFVDPQEGVAMMCGFLVVIAFGVAAFFAHKTRGKIWRYGKPN
IHWEQPLVSGKASEGRDVEEWVNNVEESRSVQDAPTLLVSEKGAGLLNASANSVISFPPA
KVDSSSYNEDIYDNKEYSERTTSRPSEAFSHGGRTSSSPSEETGGGRKPSANRGKRRRRN
PELDESQYETEYTTGGETGNELDREEQENTYPDITSDDQRQDYKREFDVDLREYKRLCTE
MDDINDQLNKLSRQLDTLDETSAKYQAVADEYNQLKDLKQTSDYRTKKKECRRLRHKLFH
IKRMVKDYDKNH
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgtttgacaagcagcactacgagagtccgccggtctacagtcctcctttcagctcgcca
tccaacaatggctttggccctccaggcagcttccatactcctcagagcgaatacaacgca
tacccacctcctccaggatcttactacattgaggacaaaccgcagctcttctacaaatgg
ctgtcacctccggggatcatcaaggccatgatggctacggtgatcgtgttgtctgtggcg
atatttgcctgcgtggcctccactctcatgtgggacatgcagtatggaatgggaatggga
atgggctatggcggtggatacggtggcggtggatacggtggcggtggatacggtggcggt
ggatacggtggtgggagctacggctcaggatacggtggttacggaggaggctacggcaac
agccatggttcctacatctcaccttactcagccaaaaccaccatgattgccatggcagcc
attaacttcataggggcgctggccttcttcattaccagcttctctaaatccaacactgtc
cgcagcaggaagttctttctggccctcatgatagccagcatcattatggctatcctgcag
ggcatcatcagcatcgtctacattgttggggtgaaccccatggcccagggctcctccagt
atgatgtacaatccgatgttaatgatgtgccagaacctctaccagaccagcagctactca
cagatgggaggagtgggaggcttccccatgtacaaccagtatctctaccattactgcttt
gttgacccacaggagggagttgccatgatgtgtggatttctggttgtcattgccttcggt
gttgcagcattctttgcacacaaaacaagagggaagatctggcgctacgggaaaccaaat
atccactgggaacagccgcttgttagtgggaaggcctcagagggcagagacgtagaggaa
tgggtaaacaatgtggaggaaagccgcagtgttcaagacgccccaaccctgctggtgtca
gagaagggagccgggctgctcaacgcctcagcgaacagtgtcatctccttccccccggcc
aaggtggacagcagctcctacaatgaggacatctacgacaacaaagagtactcagagagg
accaccagcagaccatcagaagccttctcccatggtggaagaaccagctccagcccgtca
gaggagactggcgggggtcgcaaaccctctgccaacaggggcaagcgacgcagacgcaac
cccgagctggatgagtctcagtatgagacagagtacaccaccggaggagaaacaggcaat
gaacttgacagagaagagcaggaaaatacttatccagatataacatcggatgatcagcgt
caagactataagagggagtttgatgtcgaccttagggaatacaagcgcctgtgtactgag
atggacgacattaatgaccagttgaacaaactcagccggcagctggacacactggatgaa
acctctgccaaataccaggctgtagcagatgaatataatcagttgaaggatctgaagcag
acatcagactacaggactaagaagaaagagtgtcgcaggctgagacacaagctgttccac
atcaaacgcatggtgaaggactacgacaagaaccactga

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