Cyclopterus lumpus (lumpfish): 117729801
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Entry
117729801 CDS
T09199
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117729801 (mindy4)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117729801 (mindy4)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
117729801 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
117729801
NCBI-ProteinID:
XP_034387061
LinkDB
All DBs
Position
4:18280986..18289780
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AA seq
703 aa
AA seq
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MAVSVEEASSSVVREYLSRKGLRRTIACMDEELPRTESSVNNRSHLRQILNMEGLYRKNK
AQLSPLKTLLEIIVKHQVEGLKDDQIPISKSDSLHYAQTTNLIANSPAVTPTLMSDSKTE
DHTACVIGKDTNLWSDIGEICPSQPMHTSLLPETDRLSSQNKTGFRSHHSEDHKLQPLIA
SVQDNESFIRRESEKKTSTTESTQRSKMNRIRRGMIAGPIASTLQESNKKRQTRRLEGPQ
QLLRREEENKQSVDGLLVSGVHQKSSESGINSADCLGGQWESWSAPDNFEKVQQDIRTTT
KVKSLTRPNGADLNVAEMVLDDIDDEDLRELSKVSIQRTVAERSFAGGPMDQHTAVELKV
ILIGSSLNCFNVEWRNQGFPFSEMHDLRYGIVQKKGGPCGVLASIQAFVLKKLLFENVES
SNTGLQRLRPSNTTRRKCLALAAAEILWRAGEEKQATIAINSGRNHFTPTGQYKSEGVLE
KITCFTVDNVKDLQYLLERHINQFETGVLGCILLTISAVLSRSIEKVRDDMDVPTTTLIG
AHGYCTQELVNLLLCGRAVSNVFDNDMELDSGNGNMTLLKGVKGHCNVGLMSLFEHYNIC
KVGAYLKTPRYPIWVVCSESHFSVLFGLQRELLTNRCQSLEFELYYYDGLANQQEEIRLT
VSVGESALSCHDADTDLIPPLEHCIRTRWKDAFVNWNDTEPIL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccgtcgaagaggcgtcttcgtccgttgtccgggaatacctgagccggaag
ggactcaggaggacgatcgcttgtatggatgaagaacttccgcgcacagaatccagtgtc
aacaacagatcacatttgaggcagatcctcaacatggagggtctctatagaaagaataaa
gctcagctctcccccctgaaaacattactggagattattgtaaagcatcaggttgagggc
cttaaggatgaccagatccccatcagtaaaagtgattccctgcactacgctcaaactacg
aacttgattgctaattctcctgcagtaacaccaacattgatgagtgactcaaagacagag
gatcacacagcttgtgtaatcggcaaagacaccaacttatggtctgatataggagagatc
tgcccgtctcaaccgatgcatacatcattattgcctgagacggatagactctccagtcaa
aataaaacaggtttcaggtctcatcactcagaagatcataaactccagccactgattgct
tccgtccaagacaatgagagcttcatcagaagagaatcagaaaaaaagacttccaccact
gagagcacccaacggagcaaaatgaatcgaattagacgtggcatgattgctggaccaata
gctagcacacttcaggaatcaaacaaaaaaaggcagactcgaaggctagaagggccccag
cagctgctcagaagagaagaagaaaacaagcagtctgtggatggacttttagtgagtggc
gtacatcaaaaaagctcagagagcggaatcaattcagctgactgcttaggagggcaatgg
gagtcgtggagtgcaccagacaactttgaaaaagtgcaacaagacatacggacaactaca
aaagtaaagtctttgaccaggccaaatggggctgatttgaatgtggctgagatggtttta
gatgacatcgatgatgaggatctgcgagaactctccaaagtgtccatccagagaactgtc
gcagagcgtagcttcgcgggcggcccgatggaccaacacactgccgtggagttgaaagtg
attctgattggttccagcctgaattgtttcaatgttgagtggaggaatcaaggtttccca
ttctcagaaatgcacgacctgagatatggaattgtgcagaaaaaggggggtccttgtgga
gttctggcatccatccaagcctttgttctaaagaaactgctatttgaaaacgttgaaagc
agtaacacaggccttcagaggttaagaccttccaacacaaccagaagaaagtgtttggct
ttagcggcggctgaaatactgtggagggctggcgaggaaaaacaagccacaattgcaata
aattccgggagaaatcatttcaccccaactggacaatacaaatctgaaggagtgcttgaa
aagataacatgtttcacggtggataacgtcaaagacctgcagtatcttctggagcggcat
atcaatcagtttgagaccggggtgttgggatgcatcctactcaccatatctgcagttctc
tctcgatccattgaaaaagtaagggacgatatggacgtgcccaccaccacactcatcgga
gcccacggctactgcactcaggagctggtcaacctgttgctctgcggcagagcagtttct
aatgtcttcgacaatgacatggagttggactcaggcaatggcaacatgactctactgaag
ggagtcaaaggccactgtaacgttggcctgatgtccttgtttgaacactataacatctgt
aaggtaggagcttacctgaagactccccgttaccccatttgggtggtctgcagtgaaagc
cacttcagcgtgctgtttggcctgcagagggagctgttgaccaatcggtgccaaagcctg
gagtttgaactctactattatgatggactggccaatcaacaggaggagatccgcctcact
gtctctgttggcgaatcggccctgagctgtcatgatgccgacacagatctcattcctcca
ctggagcactgtatccgaacaaggtggaaagatgcatttgtcaattggaatgacacggag
cctattctctga
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