Cyclopterus lumpus (lumpfish): 117729813
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Entry
117729813 CDS
T09199
Symbol
prrx1b
Name
(RefSeq) paired mesoderm homeobox protein 1b isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117729813 (prrx1b)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117729813 (prrx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
117729813
NCBI-ProteinID:
XP_034387077
Ensembl:
ENSCLMG00005008603
LinkDB
All DBs
Position
4:complement(8554612..8569126)
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AA seq
305 aa
AA seq
DB search
MTSSYAHVMDRQASLSNRLESPITSNLDNLQAKKNFSVSHLLDLEEAGEMVGTQADESVG
EAGRSMLESPGLTSGSDTTQQENEQMNTEEKKKRKQRRNRTTFNSSQLQALERVFERTHY
PDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQP
IVPRPAPRPNDYLSWGSAAPYSPIAPLCQHEQGGTRSCDPPDERHGHLPAHLLQHQHVPG
HEHGQQHRQPAAQSQGVQLEPGAHGELRGGAAWDWRRRGGEPPCRWTPADGHRLWVEHHL
TYPGS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcacatgtaatggacaggcaagcctcgctatcaaaccgcctggag
agtccgatcacgtcgaacctggacaacctgcaagccaaaaagaacttctcggtcagccac
ctgttggatctggaagaggccggggaaatggtcggcacccaggcggacgagagcgtcggg
gaggcggggaggagtatgctggagtccccggggctgacgagcgggagcgacacgacccag
caggagaatgaacagatgaacacggaggagaagaagaagaggaagcagcgcaggaacagg
accaccttcaacagcagccagctccaggctctggagagagtgtttgaaaggacacactac
cccgacgccttcgtcagagaggacctggcccgccgggtcaacctcaccgaggccagagtc
caggtttggtttcagaacaggagagctaaattccgcaggaacgagcgcgccatgctggcc
agcaaaaacgcctcgctcctcaaatcgtactcaggcgacgtgacggcggtagagcagccc
atcgtaccgcgcccggcgccccgcccaaacgactacctgtcctggggcagtgccgccccc
tacagtcccatcgctcccctctgtcagcatgagcagggcgggaccagatcctgtgaccct
cctgacgagcgccatggccacctacccgcccacctgctccaacaccaacacgtcccaggg
catgaacatggccaacagcatcgccaacctgcggctcaaagccaaggagtacagcttgaa
ccaggtgcccacggtgaactgagaggaggagcggcttgggactggcgcaggaggggaggg
gaacctccctgccgctggacccccgcggacggacaccgtctctgggttgagcatcatctt
acataccctggatcatga
DBGET
integrated database retrieval system
