Cyclopterus lumpus (lumpfish): 117729958
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Entry
117729958 CDS
T09199
Symbol
serbp1a
Name
(RefSeq) SERPINE1 mRNA binding protein 1a isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117729958 (serbp1a)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117729958 (serbp1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
117729958
NCBI-ProteinID:
XP_034387264
Ensembl:
ENSCLMG00005008195
LinkDB
All DBs
Position
4:23707782..23714796
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AA seq
411 aa
AA seq
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MPGQMQEGFGCAITNRFDQLFDDESDPFEQLKQAEVKKKEAPAPGAAKTAGQAAKQPKKE
SQKDRKVPLTDKKEEIQAPAPLKKDGAGIRRMGRKPEGEGFRPQVGSGEGRPPTDRRPVD
RRPPRRFERPAGDAGEKPEGGEFSVEKPIGDRPMRGRGGGRGGTGTGIRGSRGRGGMGRT
DGFDSRGKREFDRHSGSDRSSQKGEEKRGGSGPHNWGTVKDDVELDQSNVTEEHPEGEEH
PPADSENKRENEVEEVKEEGPKEMTLDEWKAVQDKERAKVEFNIRKANEGANWNKGFVLH
KSKAEDKKEEVIDTEVEELKLDDEHHFRKPANDITAQLEINFGDLGRPGRGRGGGPRGGR
GGRGRGGPGGGGGPPGAPSGEATRPVRAPRPDKSSASVPNVDDPEAFPALA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacaaatgcaagaaggtttcggctgcgccataaccaatcggttcgaccagcta
tttgacgacgagtcggatcccttcgagcagctgaagcaagccgaagtgaagaagaaggaa
gcccctgctcctggtgccgccaagaccgcgggtcaggctgccaagcagccgaaaaaggag
tcccaaaaagacagaaaggtcccgctgaccgacaagaaggaggagatccaggcgccagcc
ccgcttaagaaagatggtgccggcattaggagaatgggccgcaagccggagggcgagggc
ttcagaccccaggttggctcgggagaggggcgcccccccacagacaggcggcctgtggac
aggcggcccccgcgtcgctttgagaggcctgctggtgatgccggcgagaagcccgaggga
ggcgaattctcagtggaaaaacccattggtgataggccgatgagagggcgtggcggcggc
agaggcggcaccggcactggcatccgcggaagcagaggccgcggcggcatgggacgcact
gatggctttgactccagaggaaaacgtgaatttgatagacacagtggcagcgaccgatct
agtcagaagggtgaggagaagcgtggtggaagtggacctcacaactggggcaccgtcaag
gatgacgtcgagcttgaccaatcaaacgttactgaggaacaccccgagggagaggaacac
ccacccgctgactctgagaacaaaagggagaatgaggtcgaggaagtgaaggaagaaggc
cccaaggagatgactctggacgaatggaaggccgtgcaggacaaggagcgagccaaagtg
gagttcaacatccgtaaggccaacgagggagccaattggaacaaaggattcgtgctgcac
aagtccaaggccgaagataagaaagaagaggtgattgacactgaggttgaggagctcaag
cttgacgatgaacaccacttccggaagccagccaatgacattacggcacagctggagatc
aatttcggagacctgggccgtccaggacgcggacgcggcggtggaccacgcggtggccgc
ggcggtcgtggacgcggcggacccggcggtggcggtgggccacccggcgctcccagtggc
gaagccactaggccagtccgcgcaccaaggcctgacaagtcatctgcgtctgtgcccaac
gtggacgacccagaggccttcccagccctggcttaa
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