KEGG   Cyclopterus lumpus (lumpfish): 117729988
Entry
117729988         CDS       T09199                                 
Symbol
dsg2.1
Name
(RefSeq) desmoglein-2.1
  KO
K07597  desmoglein 2
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117729988 (dsg2.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117729988 (dsg2.1)
Cell adhesion molecules [BR:clum04515]
 Cadherins
  Major cadherins
   117729988 (dsg2.1)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Fibulin_C
Other DBs
NCBI-GeneID: 117729988
NCBI-ProteinID: XP_034387314
LinkDB
Position
4:complement(3282857..3293224)
AA seq 1209 aa
MIGFSSPVFFLLLLTAVIAVIANSGDKLVRQKREWILPPKPLTENIDYTEMEFIAKIRSD
VETSDKIEYSLEGIGANQKPFNVFVVDPDTGFIRVTQKLDRELIDTYTLSGVAKYKDGSD
AEKKIDIRIKVVDENDNPPVFGEIKPGNVNELSIAGTSVMKITATDADESGNENSQIVYT
ILEQNPPHGMFDIKNDGTIFVKSAALDRETTDMYTLTVQGQDLNGKAGGKSATTTVMINV
LDVNDNLPTLEKEMYEGSIEENTKGVEVMRLKAEDLDVKNTENWDAVFEIVKGNEAGYFS
ITTDPKTNEGILMLDKAVDYEDVMDLELGLSVRNSAQFYDGSEGSVGGSGSIASGASAGG
AGGGGAGGGGAGGGGAGGGGAGGGGSSGTGGGAGSGGSSWQKGKTYPIKINVKNQPEGPS
FEPKVKAIPISEGSSFNIDTVIATYKAIDGDTRKPAENVRYVKGLDPNNWLTIDSKTAEI
RLKKMPDRESPYLINGTYMAKVLCISDDMPGKTATGTVAIQVADFNDNCPSLTRNIETIC
IPSDAVIVSATDEDHFPNGAPFEFAIIPEETQGTWHVEHLNDTSAILRAVGDIWPGSYEV
SFVVKDQQGLACPEPQKATIQVCTCEDGVVCGKQSAGGQPNREAELGPAGIGLLLLGLLL
LLLALLLLLFCNCGGGGAGSGSFAEMPFDTKSHLINYHTEGQGENTAVPLLNMPTQIDDN
LVMGNNMLVMAPVEGMGFQRSVASMDGMNAYGDGYASGHREAWGMANQTIGSGLYSEFDG
RESRVGGGMYDGMALPDNFLGQYYSQKVTSENENLGGKDGLLVYDYEGQGSSAGSVGCCS
LLEVDNDLDFLDDLGTKFKTLAEVCGGKKIPTEVKQVFSLPPSASINTQTSVSSSMAIQQ
QPPPPKQQPTISTTVVRDLSEGTQVMKESTATVREGMTTVRNGVTMVNEGMANQGQMLLL
QPQQQQPIYYTTSPMMQPAHFVVQPQVQNTVVLAEAPATNLQGMVLVNGTQTGPAQGMVL
VNGTQTGPAQGMVLVNGTQTGPGQGMVLVNGTQTGPGQGMVVQGQTMMSGGQAHGPHMML
MDRSGFQGGCANLIQTGNLPGSQTMMMVEGKVPAGSMSYVQGGTLQAGGLSGSQRVLVVG
GSTSGGGPLIQEAGGLSQKSGISGSQRVLYSKGSPSAGSQSTVVGSSTTTVNSTPTYRKV
VVQETRERH
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgattgggttttcttccccagtgtttttcctgctactactgacggctgttattgcggtg
attgctaactctggagacaagctggtaagacaaaaaagagaatggattctccctccaaag
ccgctgacggaaaatatagactacactgaaatggagtttattgctaagattcggtcagat
gttgaaacttcggacaagatcgaatactccctagaaggcatcggtgccaatcaaaagccc
ttcaatgtgtttgttgtcgaccccgacactggatttattagagtgacccaaaagctcgac
agggagctaatcgacacgtacactctgtcaggtgttgctaagtacaaagatggcagcgat
gcagagaaaaaaattgacatccgcatcaaggttgtggatgagaatgacaacccgccagtg
tttggagaaatcaagcctgggaatgtgaatgagctcagtattgcagggacttcagttatg
aaaataactgcgaccgacgctgacgaatcagggaacgagaattctcaaatcgtctacacc
atcctagaacagaacccacctcatggcatgttcgacataaagaacgatgggaccatcttc
gtcaaaagtgctgccctggacagagagacaacagatatgtacactctgacggtccaaggt
caagacttaaatggcaaagcaggcggaaaaagtgcaaccacaacggttatgattaatgtc
ctagacgtaaacgacaaccttcccactctggaaaaggagatgtatgagggcagcattgag
gagaacacaaagggtgtggaggtgatgaggctcaaagcagaggacctggacgtgaagaac
acagagaactgggacgctgtgtttgaaattgtcaaaggcaacgaggcggggtacttcagc
attacgacagaccccaagaccaacgagggcatcctgatgctcgacaaggctgtggattat
gaggatgtgatggatcttgaactaggactatctgtgaggaacagcgctcaattttatgat
ggatctgagggaagtgtcggaggaagcggatctattgcatctggtgccagtgcaggtggt
gctggtggaggcggtgcgggtggaggcggtgcgggtggaggcggtgcgggtggaggcggt
gccggtggaggcgggtcttctggaactggtggcggagcaggcagcggaggatcatcatgg
caaaaagggaaaacctatccaatcaagatcaacgtgaagaaccagcccgaggggccaagt
ttcgagccgaaagtgaaagccattcccatctcagagggcagctccttcaacattgataca
gttattgccacctacaaggcaatagatggagacaccaggaaaccggcagagaatgtcagg
tatgtcaagggcttggaccctaacaactggctaaccatcgactcaaagacagctgagatc
agactgaaaaagatgcctgatagagaatctccatacctgatcaatgggacatacatggct
aaagtgctctgcatctcagacgacatgcctggtaaaacagcgactggcacagtagccatc
caggttgcggattttaatgacaactgcccctccctgaccaggaacatagagaccatctgt
atcccgagtgatgcagttattgtcagcgcaacagatgaggatcacttcccaaacggggct
ccgtttgagtttgccatcatcccagaggaaactcagggcacatggcatgtggagcattta
aatgatacctcagctatcctgagggccgtgggggacatatggcctggctcctatgaggtg
agctttgtggtgaaggaccagcagggattggcctgtccagaaccacagaaggcgacgatc
caagtttgtacctgtgaggatggggtagtgtgtggaaaacaaagcgccggcggtcagccc
aacagggaagcggagttaggacctgcaggcattggactgcttctcctgggcctgctgctg
ttactactcgcccttctgttgctgctcttctgcaattgtggggggggcggggctgggtca
gggagctttgccgagatgccattcgacaccaaatcccacctcattaactaccacactgag
ggccagggggagaacacggcggtgccactcttgaacatgccaacacaaatagatgacaat
ttagtgatgggtaacaatatgttagtaatggcacccgtggaaggtatgggcttccagaga
tccgtagcctccatggatgggatgaacgcttatggagatggctacgcaagcggccacaga
gaagcatgggggatggcgaaccagacaattggcagtgggttgtactctgagtttgatggc
agagaatccagagtaggtggaggaatgtatgatggcatggctctgccagacaacttcctg
ggacagtactactctcagaaggtgaccagtgaaaacgagaaccttggagggaaggacggt
cttctggtctatgactacgagggccagggctcctctgctggctcagtgggctgctgcagc
ctcctggaggttgacaacgacctggatttccttgatgacctcgggaccaagttcaagacc
ctggctgaagtgtgcggaggcaagaagatcccaaccgaagtcaaacaagtgttctctctt
ccacccagtgcttccatcaacactcagacctcagtatcaagttcaatggccatccaacag
cagccccctccacccaagcagcagcctaccatctccacgactgttgtcagggatttatct
gagggtactcaggtgatgaaggaaagcacggccacagtgagggaagggatgaccacagta
aggaatggggtgactatggtgaacgaagggatggcaaatcaaggccagatgctcctgcta
cagccacagcagcagcagcccatctactacaccaccagccctatgatgcagccggcacac
ttcgtagtccagccacaggttcagaacaccgtcgtgctggcggaggcaccagccaccaac
ctccaaggcatggtactggttaacggcacccagactggacctgcccaaggcatggtactg
gttaacggcactcagactggacctgcccaagggatggtactggttaacggcacccagact
ggacctggccaaggcatggtactggttaacggcacccagactggacctggccaaggcatg
gttgttcaggggcagacaatgatgtccggcggacaagcccatggcccccacatgatgctg
atggacaggagtggattccagggaggctgtgcaaacctgattcaaactgggaacctccct
ggctctcagaccatgatgatggtggagggcaaggtccctgcagggtcaatgagctacgtg
caggggggcactctgcaggcaggggggctttcgggatcccagagggtcctggtggtcgga
gggtcaacaagcggtggagggcctcttatccaggaggcaggaggtctgtctcagaagagt
ggcatctctggctctcaaagagtcctgtacagcaagggcagcccatccgctggctcacag
agcaccgtggtgggctcctctaccaccacagtgaattcaacccccacataccgcaaagtg
gtggtgcaagagacaagagaaagacactga

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