Cyclopterus lumpus (lumpfish): 117729988
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Entry
117729988 CDS
T09199
Symbol
dsg2.1
Name
(RefSeq) desmoglein-2.1
KO
K07597
desmoglein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117729988 (dsg2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117729988 (dsg2.1)
Cell adhesion molecules [BR:
clum04515
]
Cadherins
Major cadherins
117729988 (dsg2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
117729988
NCBI-ProteinID:
XP_034387314
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Position
4:complement(3282857..3293224)
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AA seq
1209 aa
AA seq
DB search
MIGFSSPVFFLLLLTAVIAVIANSGDKLVRQKREWILPPKPLTENIDYTEMEFIAKIRSD
VETSDKIEYSLEGIGANQKPFNVFVVDPDTGFIRVTQKLDRELIDTYTLSGVAKYKDGSD
AEKKIDIRIKVVDENDNPPVFGEIKPGNVNELSIAGTSVMKITATDADESGNENSQIVYT
ILEQNPPHGMFDIKNDGTIFVKSAALDRETTDMYTLTVQGQDLNGKAGGKSATTTVMINV
LDVNDNLPTLEKEMYEGSIEENTKGVEVMRLKAEDLDVKNTENWDAVFEIVKGNEAGYFS
ITTDPKTNEGILMLDKAVDYEDVMDLELGLSVRNSAQFYDGSEGSVGGSGSIASGASAGG
AGGGGAGGGGAGGGGAGGGGAGGGGSSGTGGGAGSGGSSWQKGKTYPIKINVKNQPEGPS
FEPKVKAIPISEGSSFNIDTVIATYKAIDGDTRKPAENVRYVKGLDPNNWLTIDSKTAEI
RLKKMPDRESPYLINGTYMAKVLCISDDMPGKTATGTVAIQVADFNDNCPSLTRNIETIC
IPSDAVIVSATDEDHFPNGAPFEFAIIPEETQGTWHVEHLNDTSAILRAVGDIWPGSYEV
SFVVKDQQGLACPEPQKATIQVCTCEDGVVCGKQSAGGQPNREAELGPAGIGLLLLGLLL
LLLALLLLLFCNCGGGGAGSGSFAEMPFDTKSHLINYHTEGQGENTAVPLLNMPTQIDDN
LVMGNNMLVMAPVEGMGFQRSVASMDGMNAYGDGYASGHREAWGMANQTIGSGLYSEFDG
RESRVGGGMYDGMALPDNFLGQYYSQKVTSENENLGGKDGLLVYDYEGQGSSAGSVGCCS
LLEVDNDLDFLDDLGTKFKTLAEVCGGKKIPTEVKQVFSLPPSASINTQTSVSSSMAIQQ
QPPPPKQQPTISTTVVRDLSEGTQVMKESTATVREGMTTVRNGVTMVNEGMANQGQMLLL
QPQQQQPIYYTTSPMMQPAHFVVQPQVQNTVVLAEAPATNLQGMVLVNGTQTGPAQGMVL
VNGTQTGPAQGMVLVNGTQTGPGQGMVLVNGTQTGPGQGMVVQGQTMMSGGQAHGPHMML
MDRSGFQGGCANLIQTGNLPGSQTMMMVEGKVPAGSMSYVQGGTLQAGGLSGSQRVLVVG
GSTSGGGPLIQEAGGLSQKSGISGSQRVLYSKGSPSAGSQSTVVGSSTTTVNSTPTYRKV
VVQETRERH
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgattgggttttcttccccagtgtttttcctgctactactgacggctgttattgcggtg
attgctaactctggagacaagctggtaagacaaaaaagagaatggattctccctccaaag
ccgctgacggaaaatatagactacactgaaatggagtttattgctaagattcggtcagat
gttgaaacttcggacaagatcgaatactccctagaaggcatcggtgccaatcaaaagccc
ttcaatgtgtttgttgtcgaccccgacactggatttattagagtgacccaaaagctcgac
agggagctaatcgacacgtacactctgtcaggtgttgctaagtacaaagatggcagcgat
gcagagaaaaaaattgacatccgcatcaaggttgtggatgagaatgacaacccgccagtg
tttggagaaatcaagcctgggaatgtgaatgagctcagtattgcagggacttcagttatg
aaaataactgcgaccgacgctgacgaatcagggaacgagaattctcaaatcgtctacacc
atcctagaacagaacccacctcatggcatgttcgacataaagaacgatgggaccatcttc
gtcaaaagtgctgccctggacagagagacaacagatatgtacactctgacggtccaaggt
caagacttaaatggcaaagcaggcggaaaaagtgcaaccacaacggttatgattaatgtc
ctagacgtaaacgacaaccttcccactctggaaaaggagatgtatgagggcagcattgag
gagaacacaaagggtgtggaggtgatgaggctcaaagcagaggacctggacgtgaagaac
acagagaactgggacgctgtgtttgaaattgtcaaaggcaacgaggcggggtacttcagc
attacgacagaccccaagaccaacgagggcatcctgatgctcgacaaggctgtggattat
gaggatgtgatggatcttgaactaggactatctgtgaggaacagcgctcaattttatgat
ggatctgagggaagtgtcggaggaagcggatctattgcatctggtgccagtgcaggtggt
gctggtggaggcggtgcgggtggaggcggtgcgggtggaggcggtgcgggtggaggcggt
gccggtggaggcgggtcttctggaactggtggcggagcaggcagcggaggatcatcatgg
caaaaagggaaaacctatccaatcaagatcaacgtgaagaaccagcccgaggggccaagt
ttcgagccgaaagtgaaagccattcccatctcagagggcagctccttcaacattgataca
gttattgccacctacaaggcaatagatggagacaccaggaaaccggcagagaatgtcagg
tatgtcaagggcttggaccctaacaactggctaaccatcgactcaaagacagctgagatc
agactgaaaaagatgcctgatagagaatctccatacctgatcaatgggacatacatggct
aaagtgctctgcatctcagacgacatgcctggtaaaacagcgactggcacagtagccatc
caggttgcggattttaatgacaactgcccctccctgaccaggaacatagagaccatctgt
atcccgagtgatgcagttattgtcagcgcaacagatgaggatcacttcccaaacggggct
ccgtttgagtttgccatcatcccagaggaaactcagggcacatggcatgtggagcattta
aatgatacctcagctatcctgagggccgtgggggacatatggcctggctcctatgaggtg
agctttgtggtgaaggaccagcagggattggcctgtccagaaccacagaaggcgacgatc
caagtttgtacctgtgaggatggggtagtgtgtggaaaacaaagcgccggcggtcagccc
aacagggaagcggagttaggacctgcaggcattggactgcttctcctgggcctgctgctg
ttactactcgcccttctgttgctgctcttctgcaattgtggggggggcggggctgggtca
gggagctttgccgagatgccattcgacaccaaatcccacctcattaactaccacactgag
ggccagggggagaacacggcggtgccactcttgaacatgccaacacaaatagatgacaat
ttagtgatgggtaacaatatgttagtaatggcacccgtggaaggtatgggcttccagaga
tccgtagcctccatggatgggatgaacgcttatggagatggctacgcaagcggccacaga
gaagcatgggggatggcgaaccagacaattggcagtgggttgtactctgagtttgatggc
agagaatccagagtaggtggaggaatgtatgatggcatggctctgccagacaacttcctg
ggacagtactactctcagaaggtgaccagtgaaaacgagaaccttggagggaaggacggt
cttctggtctatgactacgagggccagggctcctctgctggctcagtgggctgctgcagc
ctcctggaggttgacaacgacctggatttccttgatgacctcgggaccaagttcaagacc
ctggctgaagtgtgcggaggcaagaagatcccaaccgaagtcaaacaagtgttctctctt
ccacccagtgcttccatcaacactcagacctcagtatcaagttcaatggccatccaacag
cagccccctccacccaagcagcagcctaccatctccacgactgttgtcagggatttatct
gagggtactcaggtgatgaaggaaagcacggccacagtgagggaagggatgaccacagta
aggaatggggtgactatggtgaacgaagggatggcaaatcaaggccagatgctcctgcta
cagccacagcagcagcagcccatctactacaccaccagccctatgatgcagccggcacac
ttcgtagtccagccacaggttcagaacaccgtcgtgctggcggaggcaccagccaccaac
ctccaaggcatggtactggttaacggcacccagactggacctgcccaaggcatggtactg
gttaacggcactcagactggacctgcccaagggatggtactggttaacggcacccagact
ggacctggccaaggcatggtactggttaacggcacccagactggacctggccaaggcatg
gttgttcaggggcagacaatgatgtccggcggacaagcccatggcccccacatgatgctg
atggacaggagtggattccagggaggctgtgcaaacctgattcaaactgggaacctccct
ggctctcagaccatgatgatggtggagggcaaggtccctgcagggtcaatgagctacgtg
caggggggcactctgcaggcaggggggctttcgggatcccagagggtcctggtggtcgga
gggtcaacaagcggtggagggcctcttatccaggaggcaggaggtctgtctcagaagagt
ggcatctctggctctcaaagagtcctgtacagcaagggcagcccatccgctggctcacag
agcaccgtggtgggctcctctaccaccacagtgaattcaacccccacataccgcaaagtg
gtggtgcaagagacaagagaaagacactga
DBGET
integrated database retrieval system