Cyclopterus lumpus (lumpfish): 117729998
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Entry
117729998 CDS
T09199
Symbol
ube3a
Name
(RefSeq) ubiquitin-protein ligase E3A
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117729998 (ube3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117729998 (ube3a)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117729998 (ube3a)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117729998 (ube3a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
117729998
NCBI-ProteinID:
XP_034387336
Ensembl:
ENSCLMG00005002745
LinkDB
All DBs
Position
4:27058281..27073018
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AA seq
822 aa
AA seq
DB search
MNRATAKHLIERYFRQLTDGCGNGDCTNEFCASCRDFRPLDNNAAAAKALELFKINAKLC
NPHPSKKDFLDGMMSEADICPAKEDFSDVNHLTEDTVSTILGFCEERGDYSALIRIVGRI
FSNSDALIKSFRKDEPIATENLDSSEPTDVDEQEKQGSESMAASSAALDEGLDEMMDPCE
VTVDIGAVRRVYDRLLSLDQVEAALVNALIYLTPNMELDLEYLDVYETNPDYLNIFVIVL
ENSNLHSPEYLEVALPQFCKAMSKLPVAALARLSKLWSGYGLGHIRRMMETFQQLITFTV
VSNEYDGETLVNDDGTVVAATQCLKVAFYASILGGDVDVEHNEEEEEDPESDELTLHELL
GEERLYKKGPPADPLEQELGVRPVDSIRPLIPYEDFVNESLNEVVEMDKDFTFFKVNAET
KFSFQSCPFILSVITKNQGLYYDNRIRMYSERRLTALYSMVQGQQPNPYLKLKVRRDHII
DDALVRLEMISMENPSDLKKQLFVEFEGEQGVDEGGVSKEFFQLVLEEIFNPDIGMFSYD
DDTKLFWFNSSSLENEAQYTLVGLVLGLAIYNNCILDVHFPMVVYRKLMGKKGNYLDLSD
SHPSLYQSLKKLLEHVGNVEDDMMLTFQISHTDLFGNPILYDLKEQGDQIPITEGNRQEF
VVTYADYMLNRSVERQFRAFKKGFLMVTKESPLKYLFRPEEVELLICGSRKLDFEALEKT
TEYDGGYSKDSQIIRDFWETIHSFGEEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGSD
TDRLPTSHTCFNALLLPEYACKDKLRERLLKAITYAKGFGML
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagcgactgcaaagcatctcattgagcgctactttcggcagttaaccgacggc
tgtggaaatggcgactgcacgaatgagttttgcgcatcgtgtcgtgactttcgacctttg
gataacaatgcagcggcggccaaagcgctcgagctgtttaagattaacgccaaactctgt
aaccctcacccctccaagaaggactttctggacggtatgatgagcgaggcggacatctgt
cccgctaaggaggacttctcagatgtcaatcacctcacggaggacacggtctctacgatc
ctgggcttctgcgaggagcggggcgactactcggcgctcatccgcatcgtcggcaggatc
ttctccaactcggacgccttgataaagagcttcaggaaggatgaacccatcgccactgaa
aacctggactcttcggaaccgacagacgtggacgagcaggagaagcagggctcggagtcg
atggccgcttcctccgccgcactcgatgagggtctcgatgaaatgatggacccttgcgag
gtgacggtggacatcggcgccgtgaggagggtctacgaccgccttctgagcctggaccag
gtggaggccgctctcgtgaacgcactcatttacctcacgccgaacatggagctggacctg
gagtacctggacgtgtacgagacgaacccagactacctgaacatcttcgtcatcgtgttg
gagaacagtaacctccacagccccgagtacctggaagtagctctgccacagttctgcaaa
gccatgagcaaactgccggtggcggcgctcgcccggctgtccaagctgtggtccgggtac
ggactcgggcacatccgccgcatgatggagaccttccagcagctcatcacgtttacggtc
gtcagcaacgaatatgacggcgagactctcgtgaacgacgacgggaccgtggtggccgcc
acgcagtgtctgaaagttgccttctacgcaagcatcctgggcggcgacgtggacgtggag
cacaacgaggaggaggaggaagaccccgagtccgacgagctcaccctgcatgagctgctg
ggcgaggagcggctctacaagaaaggaccgccggccgatccgctggagcaagaactgggc
gtcagacctgtggacagcatcagacccctcatcccctacgaggactttgtgaacgagtcg
ctgaacgaagtggtggagatggacaaggacttcaccttcttcaaggtcaacgccgaaacc
aagttttccttccagagctgcccctttatcctcagcgtcatcaccaagaaccaagggctg
tactacgacaaccggatccggatgtacagcgagcggcgcctcacggccctctacagcatg
gtccagggccagcagcccaacccctatctcaagctcaaggtccgccgagatcacatcatt
gacgacgcccttgtcagactggagatgatctccatggagaacccgtccgacctgaagaag
cagctgttcgtggagttcgagggggagcaaggcgtcgacgagggcggagtttcaaaggag
ttctttcagttggtcctggaggagatcttcaaccccgacatcgggatgttcagctacgac
gacgacaccaagctgttctggttcaactcgtcctctctggagaacgaggcccagtacacg
ctggttggactggtcctggggctcgccatctataacaactgcatcctggacgtccacttc
cccatggtggtctacaggaagctcatgggcaagaaggggaactacctggacctgtcggac
tcccacccaagtctctaccagagtctgaagaagcttctggaacacgtgggcaacgtggag
gacgacatgatgctcacgttccagatctctcacacagacctgttcgggaaccccatcctg
tacgacctcaaggagcagggagaccagatccccatcaccgagggcaaccgacaggagttc
gtggtcacgtatgcagactacatgctgaacaggagcgtggagcgacagttcagagccttc
aagaaaggcttcctgatggtcaccaaggagtctcctctgaagtacctgttccgccccgag
gaggtggagctgctgatctgtggcagccggaaacttgactttgaagctcttgaaaagacg
acggaatatgacggtggttacagcaaagacagtcagatcatcagagatttctgggaaacg
attcactcgttcggagaagagcagaagaggttgttcctccagttcaccaccggcacggac
cgagcgcctgtaggaggcctcgggaaactgaagatgatcatagccaagaacggctccgac
acggacaggctgcccacctctcacacctgcttcaacgcgctgcttctgccagaatacgcc
tgcaaggacaaactgagggagcggctgctgaaggccatcacgtacgccaaaggcttcggg
atgctctga
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