Cyclopterus lumpus (lumpfish): 117730010
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Entry
117730010 CDS
T09199
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117730010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117730010
Ion channels [BR:
clum04040
]
Ligand-gated channels
Serotonin (5-HT3)
117730010
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117730010
NCBI-ProteinID:
XP_034387350
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All DBs
Position
4:16383533..16391002
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AA seq
466 aa
AA seq
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MTGGKTAWLICICFSLLQGSVAALNCTSPTPDALFDALKKELFSRNLQRPVKSFSDTLNI
SIYIAVSGILGVDEQAQTLTVFLWQVMEWDIAGLSWDEKECGTTRVSVPREKLWMPDIFI
SEFMEEDNSPKTPYVYLYNTGRVSDDKPIRVVSSCKLDIYTFPFDIQNCSLTFGSYLHIA
EEIRVNQSLTYAEVQESKLLQNKGEWELVDIEAGQTNLEVPEGSYSSVKYYIIVRRRPLL
YVVNLLIPSCFLVTVDLFSFLLPPDSMDRSSFKMTLILGYTVFLLIMNNLLPVPGETTPL
INVFFSITLTLMVTSLLETVLITNIQFSSGKYGAVPPWLSVLVLEYLAVAVGLPPKKKSN
CITVSLHSPAEAMNTSTISSRDLQSDSDAKPPVKPLLEPTLDELRKLSRDLTAIRLQMDT
HFQGSKTKQEWQLVGIVIDRLLFFFYIVFISVSFITIICIWDTAEV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacagggggaaagacagcctggcttatttgcatctgtttttcactgcttcaaggttct
gttgcagccttgaactgcaccagcccaactcctgatgccttgtttgatgctctcaagaag
gaactgttttctagaaacctacagcgacctgtaaaaagcttttcagatacattgaacata
tccatatatattgctgtgtcaggaatattaggagtggatgagcaagcccagactttgaca
gtattcttatggcaagtcatggagtgggacatcgcgggactgagctgggatgagaaggaa
tgtggaactacaagagtctctgtccctcgagaaaagctttggatgccagacatctttatc
tccgagttcatggaggaggacaattctcccaaaactccgtatgtctacttatacaacact
ggtcgtgtttctgatgataagccgatcagagtggtcagctcctgcaaattagacatctac
actttccctttcgatatccaaaactgctctctgacctttggatcctatctacacattgct
gaagagatcagagtgaatcaaagcctcacatatgcagaggtccaggagtccaaactgcta
cagaataaaggggagtgggagcttgtagatatcgaagcaggtcaaactaacctggaagta
cctgaaggaagctactcttcggttaaatactatatcattgtgagacgtaggccactcctc
tatgtggtgaacctgctgatccccagctgcttcctcgtcacagtggacctcttcagcttc
ctgctgcctcctgatagtatggaccgttcctcctttaagatgaccctcatcctgggctac
accgtgttcctccttatcatgaacaacctgcttcctgtccctggggagacaacacctctc
atcaacgttttcttcagcatcactctcactctgatggtgaccagcctgttggagaccgtg
ttgatcactaatatccagttcagctccggcaagtacggtgcggtgcctccatggctcagt
gtcctcgtgctagaatatctagctgttgctgttggtctccctccaaaaaagaagagcaac
tgcatcacagtctcccttcattcacctgctgaagcaatgaataccagcacaatctcttca
agagatcttcagagcgactctgacgctaaacctccagtgaaacctcttctggaaccgacc
ctggatgagctgaggaagctgagtagagatctcacggccatccgcctccagatggacaca
cacttccaggggagcaaaaccaaacaagaatggcaactggtcgggatagtcattgaccgt
ctgctgttctttttttacattgtcttcatcagtgtctcctttatcaccatcatatgtatc
tgggataccgcggaagtataa
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