Cyclopterus lumpus (lumpfish): 117730011
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Entry
117730011 CDS
T09199
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117730011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117730011
Ion channels [BR:
clum04040
]
Ligand-gated channels
Serotonin (5-HT3)
117730011
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117730011
NCBI-ProteinID:
XP_034387351
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Position
4:16392888..16396375
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AA seq
319 aa
AA seq
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MSPSQRSIISGLLLMSVSLCCSKLSCKEGHSGPTHESMQAVFDREAFRPAVNLSNPTITN
ISFTLYAVLGVNEKTQILTTFLWLRLYWQHEFLVWDPDECDGVIKISLPVKKLWSPDIIV
YEFVDDDVSQACPYVYVNHTGHIRWDRMLRLVSACNLKIFSFPFDMQNCTFTFGSYMHTI
MDVRVSPALTFQEMSRNSKRYLEASGEWELVDILGETSILKFGVDEWDIITFWVVIKRRP
VLYVVNLLIPSSFLMLIDILSFYLPPHSVDRASFKMTLILGYTVFLLIMNDLLPSTANGT
PIIAFWRRSSLRMSFTTTP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgtctcagaggagcatcatctcaggtttactcttaatgtcagtgtctctatgt
tgcagtaaactgtcctgtaaagaaggccacagcggtccaacacatgagtccatgcaggcc
gtgtttgaccgagaagccttcaggccagcagtgaacctcagcaatcctaccataactaac
atctccttcaccctgtacgctgtcctgggggtgaacgagaaaacccaaatactcactact
tttttgtggctgagactgtactggcagcatgagttcctggtttgggaccctgatgagtgc
gacggtgtcatcaagatttctctccctgtgaagaagctctggtctcctgacatcatagtt
tatgagtttgtggatgatgatgtttcccaagcgtgcccttacgtctatgtcaaccacaca
ggtcacatccgttgggacaggatgcttcggctcgtctcagcctgcaacctgaagatcttc
agtttcccttttgacatgcagaattgcacatttacatttggctcctacatgcatactata
atggatgtgagggtcagtccagctttgacctttcaggagatgtctcgaaactcaaagcgt
tacctggaagccagtggggagtgggaactggtggacatactgggagagacctcaatcctc
aagtttggggtcgacgaatgggacattatcaccttctgggtggtcataaagcgacggccg
gtgctctacgtggtcaatctgctgatccccagctccttccttatgctcatcgacatcctg
tccttctacctgcccccccatagcgttgaccgcgcctccttcaagatgactctcatcctg
ggctacaccgtctttctgctcatcatgaacgacctgctgcccagcacagcaaatggcaca
cccatcatagccttttggagacggtcatcattacgaatgtccttcaccacaactccatga
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