Cyclopterus lumpus (lumpfish): 117730020
Help
Entry
117730020 CDS
T09199
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117730020 (sox2)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117730020 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117730020
NCBI-ProteinID:
XP_034387361
Ensembl:
ENSCLMG00005015991
UniProt:
A0A8C3G4B2
LinkDB
All DBs
Position
4:complement(5314110..5315914)
Genome browser
AA seq
324 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGSGNTNTSGTGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLSAGGNGMGAGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNQSQMQSMHRYDMSALQYNTMASSQSYMNGSPTYSMSYSQQGTPGMTTLG
SMGPSSVVKSESSSSSPPVVTSSSHRAGPGCQSGDLRDMISMYLPGAEVSEQTAQTRLHM
SGHYQSTVPGTTINGTLPLTHMEL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccggctccccagaccaacacggggggc
tcgggcaacaccaacacgtccggcaccggacccaaccagaaaaacagcccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaatcccaaaatgcacaactcggagataagcaagaggctgggcgcggagtggaaactt
ctgtcggagagcgagaagagaccgttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggtgggctgctgtcggcgggaggaaacgggatgggagct
ggtgtcggtgtcggggtgggggctgggctgggcggcggggtgaaccagcggatggacagc
tacgcggcgcacatgaacggctggaccaacgggggctacggcatgatgcaggaccagctg
agctaccagcacccggggctgaacgcgcacaaccagagtcagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaacaccatggccagctcccagagctacatgaacggc
tccccgacatactccatgtcttattctcagcaaggcacgccagggatgaccaccctgggc
tccatggggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcgtcccaccgggccggcccgggctgccaaagcggagatctgagggacatgatc
agcatgtacctgcccggggcggaggtcagcgagcagaccgcccagaccaggctacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgccgttaaca
cacatggagctctag
DBGET
integrated database retrieval system
