KEGG   Cyclopterus lumpus (lumpfish): 117730068
Entry
117730068         CDS       T09199                                 
Symbol
vamp4
Name
(RefSeq) vesicle-associated membrane protein 4 isoform X1
  KO
K08513  vesicle-associated membrane protein 4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    117730068 (vamp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117730068 (vamp4)
Membrane trafficking [BR:clum04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    117730068 (vamp4)
SSDB
Motif
Pfam: Synaptobrevin RIFIN Fzo_mitofusin MCU DUF5345 DUF2721 DUF8567 Nuf2_DHR10-like FlaC_arch Arminin DUF4407 Ferlin_C COG3_N SNARE TTMP_N DDB_G0292058_C
Other DBs
NCBI-GeneID: 117730068
NCBI-ProteinID: XP_034387450
Ensembl: ENSCLMG00005011339
UniProt: A0A8C2Z6P7
LinkDB
Position
4
AA seq 131 aa
MTTRSRDPFAARGGTCWRRTLTRRKTSFCEDPRGPDLDLRMNNFKQVQSQVDEVIDVMQE
NISKVIERGERLDDLQDKSESLSDNASAFSSRAKQLHRRMWWRDTKMKMIIASVVVALLL
IIIIPVILRYR
NT seq 396 nt   +upstreamnt  +downstreamnt
atgacgacgaggtcacgggatccattcgcagcgagaggaggaacctgctggaggaggact
ctgacgaggaggaagacttctttctgcgaggacccacggggcccagatttggacctcaga
atgaacaacttcaagcaggtgcagtcgcaggtcgacgaggtgatcgacgtgatgcaggag
aacatctccaaggtgatcgagaggggcgagcggctcgacgacctgcaggacaagtcggag
agcctatcggacaacgcgtcggccttcagtagccgagcaaaacagctgcacaggaggatg
tggtggagggacacgaagatgaagatgattatcgcctcggtagttgtcgccctcctgctc
atcatcatcattccagtgatcctacgatatcgctag

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