Cyclopterus lumpus (lumpfish): 117730094
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Entry
117730094 CDS
T09199
Name
(RefSeq) fizzy-related protein homolog isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04110
Cell cycle
clum04120
Ubiquitin mediated proteolysis
clum04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117730094
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117730094
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
117730094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117730094
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
117730094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
ELYS-bb
Ge1_WD40
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117730094
NCBI-ProteinID:
XP_034387496
Ensembl:
ENSCLMG00005006247
LinkDB
All DBs
Position
4:18994686..18999289
Genome browser
AA seq
509 aa
AA seq
DB search
MSPTSQPVAVGSGLQVNMDPEYEHRLLRQINIQNDNLSPVKQTQSRTPTSSPLSSPSKLG
DRFIPTRAGANWSINFHRINENEKSPSQNRKTKDASSDNLKADGQAYSALLKNELLGAGI
EKIQDPQTEDRRLQPSTPEKRSLFTYSLNTKRSSPDDGSNISPYSLSPVSNKSQKLLRSP
RKPTRKISKIPFKVLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCD
LSVEGDSVTSVGWSERGNLVAVGTHKGYVQIWDAGAGKKLFALEGHTARVGALAWNADQL
SSGSRDRMILQRDVRTPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSS
LSPVQTYMDHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPLQCMDTGSQVCN
LAWSKHANELVSTHGYSQNQILVWKYPALTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGD
ETLRFWNVFSKTRSTKESVSVLNLFTRIR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaacctcccagcctgtggctgtgggatcaggacttcaggttaacatggatcca
gaatatgagcatcgtctcctccgacaaatcaacattcaaaatgacaacctgagccctgtg
aaacagacacagagtcggacccccaccagctccccgttatcttctcccagtaagcttgga
gaccgattcattcctaccagagccggggcaaactggagtatcaacttccacaggatcaat
gaaaatgagaagtcaccaagtcagaacagaaaaactaaagatgcctcctctgataacctt
aaagcagacgggcaggcctactcagctctgctgaagaatgagctgctgggagcaggaata
gaaaagatccaggaccctcagacagaggacaggcgtctacagccatcaaccccagaaaag
agaagtctcttcacctattcgctcaataccaagaggtcgtcaccagacgatggctccaac
atctctccctactctctatcacctgtcagcaacaaaagtcagaaattgcttcgttcacca
agaaagccaactcgcaagatctcaaagatcccttttaaagtcctggatgctccagagctg
caggatgacttttacctgaacttggtggactggtcgtctctcaacgtgctcagtgtcggg
ctgggaacgtgtgtttacctgtggagtgcctgtaccagccaggtaacacgattgtgtgat
ttatcagtggagggagactcggtcacgtcagtcgggtggtccgaaaggggtaacctggtg
gcagtggggactcacaaaggctatgttcagatctgggacgctggtgctgggaaaaaactc
tttgccctggaaggacacacagctagagttggagcgttagcatggaatgcagaccagttg
tcttcgggaagccgtgatcgtatgattcttcaaagagatgtgcggacccctcccctccag
tcagagaggcggctgcagggacacagacaggaagtgtgcggcttaaagtggagcactgac
catcagctgcttgcttctggtggcaacgacaacaagctgctggtatggaaccactcctca
ctgagcccagtgcaaacatacatggatcacctggctgcagttaaagccattgcctggtcc
ccccaccagcatggccttctggcctctgggggcggcacagctgaccgctgcatccggttt
tggaacaccctgacatcacagccgctgcagtgcatggacaccggctctcaggtctgcaac
ctggcctggtccaaacatgctaatgagcttgtgagcacccatggctactctcagaaccag
atcttggtgtggaaatatccagctctcactcaggttgccaaactcacaggacactcgtac
agagtgctctacctggcaatgtccccggacggtgaagctattgtgacgggagctggagat
gagacactacgcttctggaacgtatttagtaaaacaaggtcaactaaggaatctgtatcc
gttttaaatctcttcaccaggatacgataa
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