Cyclopterus lumpus (lumpfish): 117730099
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Entry
117730099 CDS
T09199
Symbol
kdr
Name
(RefSeq) vascular endothelial growth factor receptor 2 isoform X1
KO
K05098
kinase insert domain protein receptor [EC:
2.7.10.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04370
VEGF signaling pathway
clum04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117730099 (kdr)
04370 VEGF signaling pathway
117730099 (kdr)
04020 Calcium signaling pathway
117730099 (kdr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117730099 (kdr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clum01001
]
117730099 (kdr)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clum04090
]
117730099 (kdr)
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117730099 (kdr)
Protein kinases [BR:
clum01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
117730099 (kdr)
CD molecules [BR:
clum04090
]
Proteins
117730099 (kdr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
I-set
Ig_3
Pkinase
Ig_2
VEGFR-1-like_Ig-like
ig
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
V-set
Ig_VEGFR-1-like_5th
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
117730099
NCBI-ProteinID:
XP_034387505
Ensembl:
ENSCLMG00005015313
LinkDB
All DBs
Position
4:complement(24469924..24489273)
Genome browser
AA seq
1359 aa
AA seq
DB search
MMAGSVVPLLGIILKITCVAAIELRFTPDPPTLSVHGVHRMNRSDNLELTCRGRQYLRWT
TPPTSSRLSTSGDCSGSGLFCTTLRISNATANETGRYRCSYRDLKAEDGKTSAEAYVFVH
DYKVPFVPPEKEYEVVFIREGERVVIPCRGSVEDLNVTLHTKYPNKELRPDGKDSLWDAR
TGFTVPSHLISYAGVVSCQTRIGNETFKSPLYIVAVVGYKIYELTLTPTQLRLSAGERLV
LGCTAKTELNVGIEFNWTHSGQALTSGNNSRPSQATPHKKKLWNSLELSNTLTVENVTVE
HTGEFTCTASSGKMEKSASAFLKVFEKPFIDIKEPWTKVWEVNVGDQTSIPVKYSAYPEP
SSKWLKNGLPLKDDYRVKQRSDALVVRGVTETDAGQYTVVLTNRITREEQRRSFQLLVNV
PPRIIEKEVLVDTDVYPYGSSPTLRCTAWGFPAPARIRWQWMSEEDCPEVFLSGLIKSEV
QLAECTGWRDISNSTGHHPVEQIMMDAEHAQKKTASSLKIQKAEVHALYRCTAANKVGED
SRVIFFHVTRGLEVSVSPPGGPLEEDHVVLRCKADKLLYSNLTWFGVTNVSESEQIAPVQ
PCRPWWNVTALGDNLERSPPSRVVLSSLQSTNVTLELSLPDASPRDEGLYACQVENIKTR
EKTCLMRRLSLKGLEAARILNNLTDQKVNVSATISLLCDAAGTPNPTVGWTKNNHTVVEG
SGVILSERNHILTIQRVKKEDSGLYACTACNGRGCDTLQAYLTTEGAEEKTNVELIVPIG
SVVIAMFFWLLIVFVIRGRKRPRGGDLKTGYLSMILDSEDMPMDEQCERLTYDATKWEFP
RDRLKLGDPLGRGAFGQVVEAAAFGIEKAATCTTVAVKMLKEGATSSEYRALMSELKILI
HIGHYLNVVNLLGACTKPGGPLMVIVEYCKHGNLSSYLKSKRGEYSPYKRKRVDSQKLTS
AEEDLAEGDLGLGKIAQLDICTGTAVCSRAGDRAASGSGVDTQEESSDEDHLTMEDLISY
SFQVAKGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDVYKDPDYVRKGDARLP
LKWMAPETIFDRVYTTQSDVWSFGVLLWEIFSLGASPYPGVCIDELFCRRLKEGTRMRPP
DYATTEMYQTMLDCWLERPTDRPTFAELVEHLGNLLQASAQQDGKDYIPLTVGGEAGGSP
VTPDPRNPYNRPQSKEILEAQLHYDNPPSLGPPGPSERSGRPLSVKTFEDIPAARSSVME
GHTDSGMCFSPEEGKGLNQQLPTTPNFSQLLRFKSKESLASESSNQTSGYQSGYHSDDAD
GPIYANEEAIMKHNVLKKPPLHKTADKFNAEIRYSTPPV
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggctccgtcgtcccgctgctgggcatcatcctgaaaatcacttgtgttgct
gccatcgaactgcggttcacgcccgatccaccgacgctgagcgtccacggcgttcaccgg
atgaaccgatccgacaacctggagctgacgtgcagaggtcgccagtacctgaggtggacg
acgcctccgaccagcagccgcctgtccaccagcggcgactgcagcgggtccggactcttc
tgcaccaccctgaggatctccaacgccaccgcgaacgagaccgggcggtaccggtgctcc
taccgggacctgaaggcggaagacgggaagacgtccgccgaggcgtacgtgttcgtccac
gattacaaggtgcccttcgtgccgccggagaaggagtacgaggtggtgttcatccgagag
ggggagcgggtggtgataccgtgccgaggctcggtggaggacctgaacgtcacgctgcac
actaagtaccccaacaaggagctccgccccgacgggaaggactccctgtgggacgccagg
acgggcttcacggttcccagtcacctgatcagctacgccggcgtggtgtcctgccagacc
cgcatcgggaacgagaccttcaagtcccctctgtacatcgtggccgtcgtgggatacaag
atctatgaactcaccctgacccccacgcagctcaggctgtctgcgggggagcggctggtg
ctcggctgcacggctaaaaccgagctcaacgtgggcatcgaattcaactggacgcactcc
ggtcaggcgctgacctcgggtaacaactcgaggccgagccaggcgacgccccacaagaag
aagctgtggaactcgttggagttgtccaacacgctgacggtggagaacgtgacggtggaa
cacaccggagagttcacctgcaccgcctccagcggcaagatggagaagagcgcctcggcg
ttcctcaaagtgttcgaaaagccattcatcgacatcaaagagccgtggacgaaggtgtgg
gaggtcaacgtgggggatcagacgtccatccccgtgaagtactccgcctacccggagccc
agctccaagtggttgaagaacggccttcccctgaaggacgactacagagtgaaacagagg
agcgacgccctcgtcgtccgcggcgtcacggaaacggacgcgggccagtacaccgtggtc
ctgaccaataggatcaccagagaggagcagaggcggtccttccagctgctggtcaacgtg
cctcctcgcatcattgagaaggaggtgttggtggacaccgacgtgtacccgtacggcagc
agccccaccctgaggtgcaccgcttggggattccccgcgccggcgcgcatccggtggcag
tggatgtccgaagaggactgcccggaggttttcctgtccgggctgataaagtctgaggtg
cagctggcggagtgcacggggtggagggatatcagcaacagcaccggtcaccacccggta
gagcagattatgatggacgccgagcacgcccaaaagaaaaccgcgagctctttgaagatc
cagaaagccgaggtccacgccctctacaggtgcacggccgccaacaaagtaggggaggac
tcgcgcgtcatctttttccacgtcacacgcggcctggaggtcagcgtgtccccccccggc
gggcccttggaggaggaccacgtggttctgcgctgcaaggcggacaagctcctctacagc
aacctgacctggttcggcgtgaccaacgtctcggagtcggagcagatcgcgccggtgcag
ccgtgtcgcccgtggtggaacgtaaccgcactcggggacaatttggagcggagtcccccg
tcccgcgtggtgctgtccagcctgcagagcaccaacgtgaccctggagctgtcgctgccc
gacgcctcccctcgggatgaaggcctgtacgcctgtcaggtggaaaacatcaagactcgg
gagaaaacctgcctgatgcgccgtctttctctcaaaggtctcgaggctgcaaggatcctt
aacaacttaaccgaccaaaaagtcaacgtgagcgcgacgatcagcctcctgtgcgacgct
gccgggacgccgaacccgacggtgggctggaccaaaaacaaccacaccgtggtggagggc
tcaggcgtgatcctgagtgagcgcaaccacattctgaccattcagcgggtgaagaaggag
gacagcggcctgtacgcctgcacggcgtgcaacggccgcggctgcgacaccttgcaggcc
tatttgacgactgaaggtgccgaggaaaagacgaacgtggagctgatcgttcccatcggg
tcggtggtcatcgccatgttcttctggttgctgatcgtcttcgtcatccgcggaagaaag
agaccacgtgggggggatctgaagacgggctacctgtccatgatcctggactcagaggac
atgcccatggacgagcagtgcgagaggctaacgtacgacgccaccaagtgggagttccct
cgggaccggctgaagctgggtgacccgctgggacgaggagcgttcggccaggtggtcgaa
gcggccgccttcggcatcgagaaagccgccacgtgcaccaccgtcgcagtcaagatgctc
aaggagggagccacgtcgagcgaataccgcgccttgatgtcggagctgaagatcctcatt
catatcggacattatctcaacgtcgtcaacctgctgggagcctgtacgaagcctggaggg
ccgctgatggtgatcgtggagtactgcaaacacggaaacctctccagctacctgaagagc
aagcgtggagagtacagcccctacaagaggaagcgagtggacagccagaagttgacgtct
gccgaggaggatctggccgaaggggatctgggcctggggaagatcgcccagctggacatc
tgcacgggaacggccgtgtgctccagagccggagaccgggcggcttcgggcagcggcgtg
gacacgcaggaagagagctcagacgaggatcatctgaccatggaggacctgattagctac
agcttccaggtggccaaaggcatggagtttctgtcctcccgcaagtgcatccacagagat
ctggcagccaggaacatcctgctttcggagaacaacgtggtgaagatctgcgacttcggc
ctcgccagagacgtctacaaagaccccgactacgtccgcaagggagacgctcgcctccct
ctgaagtggatggctccagagaccatcttcgatcgggtgtacaccacacaaagtgacgtc
tggtcctttggagttcttctctgggagatcttttctctgggtgcgtctccctatccgggc
gtttgcatcgacgagttgttctgcaggaggctgaaggagggcaccaggatgagacccccg
gattacgccaccaccgagatgtaccagaccatgttggactgctggctggagcgtcccaca
gacaggccgacgttcgcggagctcgtagagcatctgggcaacttgctgcaggccagcgcc
cagcaggatgggaaggactacatccctctgacggtcggcggcgaggcgggaggctccccc
gtgacccctgaccccaggaacccctacaacaggccgcagagcaaggagatcctggaggct
cagctccactacgacaacccgccgtctctcggaccgccggggccgagcgagcgcagcggc
cgacccctcagcgtgaagacgttcgaggacatccccgcggcacgcagcagcgtcatggag
ggtcacacggacagcggtatgtgcttctcacctgaggaggggaagggtctgaatcaacag
ctgccaacaacccccaacttcagccagctgctgcgcttcaagagcaaagagtctctggcc
tcggagtcgtccaatcagacgagcggataccagtcggggtaccactccgacgacgcagac
ggccccatctacgccaacgaggaggccatcatgaagcacaacgtgctgaagaagcctccg
ctgcacaagacggcggacaaattcaacgcggagatccgctacagcacgccgcctgtctga
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