Cyclopterus lumpus (lumpfish): 117730246
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Entry
117730246 CDS
T09199
Symbol
fgd5a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117730246 (fgd5a)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
117730246 (fgd5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
FYVE_2
PH_9
IQ_SEC7_PH
PH_20
Motif
Other DBs
NCBI-GeneID:
117730246
NCBI-ProteinID:
XP_034387682
LinkDB
All DBs
Position
5:6384150..6414776
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AA seq
1527 aa
AA seq
DB search
MNTDLQNPLQVPRPKVRSHLTIKVQSKLMSRPCPPVRGPKPPVAPKPRPLYELHSQGESC
PPQSLSNGDLAHSDGETEDLHEMAAENLDKEEKSEDGVNDTSIGHNDKEDVAEGEIEEET
EKEVDILDNDGDSIGSEDTVKADDDSNVDTTEDENTDNDLIQPEGGHHTDDEKTSTPSLN
PAEMEDKTGEEAEEEEPSFNEKTDIVCGSLGHKHVEQNLDQPQSLSQGYKDNVTGHNEVD
REQREDSVHCLHTDETDLEVGGFAFGFSVLPTVTEEYPYDVIGPTDDASDTCDPAETGET
GVWQPERATKDLSGCFRFTSSTEDVFGPYSVIEAVPPDMTGTADPEWSQDDTDDRPSNEL
QTAGASNLEPYYVSSDDVDKLEDKQVLSELGEIEESTEPSNQHEGKAKDSESTDEYADID
DSLCLQAEDQRLECVSSEDYVEIGDDDEEEETEKKHIKGKTAKERTAKREQAFLSQRASC
QPRLRLCNITVPTELDAGRTPEMTNRVVFAHTTEAFEEDIEELDCHIVPYDEDTDSENEE
HIYEEAGFDSEGENFVTIDRKTIVTRSRSYSGKISGYVPETVPEETGTEYQTHDYCTVAL
DKNNEPLSHSQPPGVKSLIPSMKSQRFLFYSRSAEGPELTLTSPTEINHSRKDDIRMKRK
DDTLSLPCVITSSGSFSQRSLQSSSGVSTPTSLVDIPPPFELAYITKRPVTKSSPSLLIQ
NEPSEIPKKKSSFKRFLALKFRKKTDSKGFSDGSVRSSRSSSESSHHGTVRVIELDRRST
GSSPQLQNRIVNPQQRPLELPPPFVLHLQRKKGDPKTYGRGVSRVESFEERSRRSAMPLP
LTKPRSISFPSADTSDYENIPAMSSDYENIQIPSRPTRSHTVTEFFEDPNRTTVACNEND
GYVDMNSFPGIESITQTSKEDTESAYTEPFPMNSGGVSADEDHGRTSEEEEGVAEPSYDR
QIDGRSRAFYVAKELVDSERLHVSTLKYLQQDFRSAVTEAAVGEEGEPVLEEQRLGEILS
VLPQVYTLHSSILTELEERISQWEESQRVVDVILSRRADFGVFDTFISQYDRSMFLLEES
CRENPAFANVVKTFEKRSPEEAEVPLKHQLLQVIVRVLQYRMLLTDYLNNLSPDSKEYDD
TQAALVIVSEVADQANDNLKQGENLLRLVHIEYSLKGKRDLLKAGRMFVKEGTLMKVSRK
SRQPRHLFLMNDIMLYTYPQQDGKYRLKNTLSLSGMKVSKPVLDHVLNCLKIEVSDITIT
LSASSVGEREDWFHTLSRAIADHAAGLCTFGGPCSEAREKLWMALGEAAPVLVPVSHAMM
CMNCTSDFSLTLRRHHCNACGKVVCRSCSRNRYPLKYLKDRVAKVCDHCHAELRKRGGSV
SGACGNSSPRTHRASRPLSAVFQSLQPPSLWKSRKSASHLNQVSLTVEGSTMSGSLQRRK
KSKRKWKRLWFLLKDKVLYTFTAREDKVASESLPLQCFTVKLTERPEGEESNVFHLYHKK
TLHYTFRADDPHTARRWVNAMEEATVL
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagatttgcaaaatccactacaagtccctcgaccaaaggttcgcagtcatctg
accatcaaagtgcagtccaaactgatgtccaggccgtgtccccctgtccgtggtccaaaa
cctcctgtcgcccccaagcccagacccctgtatgagcttcattcacaaggggagtcctgt
cccccgcagagcttgagtaacggagacctggctcactctgatggggagacggaagatctt
catgaaatggctgcagagaacctggacaaagaggagaaaagcgaggatggggttaatgac
accagcatcgggcacaatgacaaagaggacgtagcagaaggagaaattgaggaggaaaca
gaaaaagaagtagatatattagataatgatggcgacagcattggctccgaggacacagtc
aaagctgatgatgattctaatgttgatactactgaggatgaaaacactgacaatgacttg
atccagcctgaaggtggtcatcacactgatgatgagaaaacatctacgccttcacttaat
cctgctgagatggaggataaaacgggagaggaggcggaggaggaggaaccaagttttaat
gaaaaaactgacatagtttgtggctctttaggacacaaacacgtagaacagaatcttgac
caaccacagtccctcagtcagggttataaggacaatgtcactggacataatgaagtagac
agggaacaaagggaggactctgtgcactgtttacacacagatgagactgatctggaagtt
ggaggatttgcatttggattcagtgtgcttccaactgtaactgaggagtatccctacgat
gtgattggccccacagatgatgctagtgatacatgtgacccagctgaaacaggggaaaca
ggggtatggcaaccagaacgggccaccaaggacctctctggctgtttccgattcacgtcc
agcactgaggatgtttttgggccttattcggtaatcgaagctgttccgccagatatgacc
ggcaccgctgacccagagtggagtcaggatgatactgatgacagaccctcaaatgaactg
caaacggcaggtgcttctaacctggaaccttactatgtgtcatcagatgacgtggataag
ctcgaggataagcaagtcctctcagaactgggtgagatcgaggagagcaccgagccgtcc
aatcagcacgaaggcaaagcaaaggacagcgagtcaacagatgagtatgcggatattgac
gattcgctctgccttcaagcggaagaccagcggctggagtgtgtctcatcggaggattac
gtcgagataggcgatgatgacgaagaggaagaaacggaaaaaaaacacatcaaaggaaaa
actgcaaaagagagaacggctaaacgagagcaggctttcctcagccagcgagcgagctgc
cagcctcgcctcaggttgtgcaacatcacagtgccaacagaactcgatgcaggccgcacc
ccggagatgaccaacagggtggtgtttgcccacaccactgaggcctttgaagaagacatt
gaggaattggactgccatattgtgccttacgatgaggacacggactcagagaacgaggag
catatatacgaggaggcaggatttgactccgaaggggagaactttgtgacaattgatcgg
aagactattgtcacacgatcacgctcttattctgggaagatttcaggttatgtcccagaa
actgtaccagaggagactgggacggagtaccagactcacgactactgcacagtggcctta
gataaaaacaacgaaccacttagccattcacagccacctggggtcaagagtttgatcccg
tcgatgaagtctcaacgtttcttgttttattcacgatctgcagagggtccagaattgacc
ttgacctctcccacagagatcaaccactctcggaaggatgacatcaggatgaagaggaaa
gatgataccctttctcttccatgtgtcataacctcttctggaagcttctcccagcgtagc
cttcaatcatccagtggtgtttccacaccgacctctctcgtggacattccaccacccttt
gagctggcatacatcactaaaagaccagtcaccaagagttccccatccctcttgatccag
aatgaacccagcgaaatacctaagaagaagtcctccttcaagcgcttcctggctcttaag
ttcaggaagaagacagattcgaaaggtttcagcgatggaagtgtccgctcgtctcgttct
tcctccgagtccagccaccacggcacagtgagagtcatcgagcttgaccgtagaagcacc
ggcagctctcctcagcttcagaaccgcatcgtgaacccccagcagcgtcctttagaactg
ccacccccctttgtcctccaccttcagaggaagaaaggtgaccccaaaacttatggcagg
ggcgtctccagagtggagtcctttgaggagcgttctcggcgctctgccatgccgctgcct
ttgaccaaaccccgctccatctccttccccagtgcagacacctcagactatgaaaacatc
ccggccatgagctcagactatgagaacatccaaatcccaagcagacccaccagatcccac
actgtcacagagttttttgaggacccaaatcgcactacagtcgcctgcaatgagaatgat
ggctatgtggatatgaacagtttccctggaattgaaagcataacccagacatcaaaagaa
gacactgaaagtgcctacacggagcctttcccaatgaactctggcggggtttcagcggac
gaggaccacgggcgtacgtcagaggaggaagagggcgtggctgagccgagttatgacaga
cagattgatggccggtcccgagcgttctacgtcgccaaagagctcgtcgactccgagaga
ctacacgtcagcaccctcaagtaccttcaacaggactttaggtccgcggtgacagaggcg
gcggtgggtgaggaaggggagcctgtgctggaggagcagaggttaggagagatattgagc
gtgctcccccaggtctacaccctacacagcagcatccttactgagctggaggaacgcatt
agtcagtgggaggagagccaaagggtagttgacgtgatcctgtcgcgtcgggcggacttt
ggggtgtttgacacctttatctcacagtatgatcgcagcatgttcttactggaggagagc
tgcagggaaaacccggccttcgccaatgtcgtcaagacgtttgagaagagaagcccagag
gaagctgaagtcccactgaaacaccagctgctgcaggttattgtgagagtgcttcaatat
cgaatgctcctcacagattacctgaacaacctctctcctgattcgaaagaatacgatgac
acgcaagctgccttggtgatcgtgtccgaggtggcggaccaggccaatgacaatctgaag
cagggggagaacttgctgcgtctggtccacatcgaatacagcttgaagggcaagagggac
ctcctgaaggccggaaggatgttcgtcaaagaaggcacactcatgaaggtctcgaggaaa
agcaggcagccgcgacacctgtttctgatgaacgatataatgctgtacacctaccctcaa
caggatgggaaatacaggcttaagaacacactatctctgtctgggatgaaggtgagcaaa
cctgttctagaccacgtgctgaactgtcttaagatcgaggtctctgacatcaccataaca
ctgtcagcaagctccgttggagagagggaggactggttccacacgctgagtcgagccata
gcggaccatgctgcaggactctgtacgtttggtggaccctgcagtgaggcccgtgagaag
ttgtggatggccctgggcgaggctgctcctgtactggtgccagtttctcatgcaatgatg
tgcatgaactgtacctctgacttcagcctcacgctgagacgacaccactgcaacgcctgc
ggcaaggtggtgtgccggtcctgttccaggaacagatacccactgaagtacctcaaagac
agggtcgccaaagtgtgcgaccactgccatgccgagctcaggaaaagaggtggcagcgtg
tcgggggcatgcggtaactccagccctcggactcaccgggccagccgtcccctctctgct
gtcttccagagcctgcagcccccgagtttgtggaagagcaggaagagcgcctcccatctc
aaccaggtgtcacttaccgtggagggatccaccatgagcggcagcctgcagcgccggaag
aagagcaagcggaagtggaagcgtctgtggttcctcctcaaagacaaggtgctctacacc
ttcacagcccgtgaggataaagtggcttcagagagtctacctctgcagtgcttcactgtc
aagctcacggagaggccagagggagaagaaagcaacgtgttccacctctaccacaagaaa
accttgcattataccttcagggccgacgatccacacaccgcacgcagatgggtcaacgcc
atggaggaggctactgttttatag
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integrated database retrieval system
