Cyclopterus lumpus (lumpfish): 117730258
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Entry
117730258 CDS
T09199
Symbol
tfap2c
Name
(RefSeq) transcription factor AP-2 gamma isoform X1
KO
K09177
transcription factor AP-2 gamma
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117730258 (tfap2c)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
117730258 (tfap2c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
S-Me-THD_C
Motif
Other DBs
NCBI-GeneID:
117730258
NCBI-ProteinID:
XP_034387700
Ensembl:
ENSCLMG00005001012
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Position
5:complement(20182288..20190061)
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AA seq
468 aa
AA seq
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MLWKLADNVKYEDDCEERHDGNSNGNPRLPHLPAVSQHLYSPSPSLSHSASSDFQPPYFP
PPYQPISYPQSGDPYSHLGDPFNINSIHQSQSSNQQHWPGRQGQEGLGAHGRSGLASQIL
GLDGSSGVRREGFRRPELLSPHVHSIESSVIGDSMGMHDMGHGLEDVQHVDDHSVIMADQ
TVIKKVLGLRGGRNLDRLQRTYYQGGILAGPVTLPKGNVLGLPFQKESLLGMVSNPTEVF
CSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDK
IGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAIAEYLGRPHVERNEV
NSRKNMLLAAKQICKEFTDLLTQDRSPLGNSRPAPIMEPGIQGCLTHFSLITHGFGSPAI
CAAMTSLQNYLNEALKQVDKMYLSSGSDTQGSSDSGSKSADKMDKHRK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggaaattagccgacaacgtgaagtacgaggatgactgcgaggaaaggcacgac
ggcaacagcaatggcaacccccggctgcctcacctgccagcggtcagtcagcacctctac
agcccgtctccctccctctcacactcggccagttcggacttccagcccccgtacttccca
cctccctaccagcccatctcctacccgcagtccggtgacccgtactcccacctcggggac
cctttcaacatcaactccatacaccagtcgcagtcgtcgaaccagcagcactggcccggc
cggcagggccaggaggggctcggtgcgcacgggaggagcggactggcgagtcagatcctg
ggcctggacggatcgtccggggtgaggagggaaggcttccgccggcctgagctgctgtcc
ccgcacgtgcacagcatcgagtcgtcggttattggtgacagcatggggatgcacgacatg
ggccacggactggaggatgttcaacatgtagatgaccacagtgttattatggcagaccag
acggtcataaaaaaagtattaggactacgaggtggcaggaaccttgatcgcttacagagg
acttattatcaggggggaattcttgcggggcctgtcactctcccgaaaggcaacgtgctg
ggtcttcctttccagaaagagtccctgctgggcatggtatcaaaccccacagaggtattc
tgctccgtaccgggccgcctgtccttgctgagctccacttccaagtacaaggttaccgtg
gccgaggtccagagacgtctgtcaccccctgagtgcctcaatgcatcgctactgggaggt
gttttacgcagagccaagtcgaaaaatggaggtcgctctctgagagaaaagctggataag
atcgggctcaacctgcctgcaggaagaaggaaggcagccaatgtcacactacttacctca
ctagtggaaggtgaagcagttcatttagcaagagactttggttacgtgtgtgagaccgag
ttccctgcaaaggcaattgctgaatacctgggcaggccacacgtggagcgcaacgaggtt
aactctcgtaagaacatgctccttgctgccaagcaaatctgcaaggagttcactgacctg
ctaactcaggaccgttcacctctgggaaactctcggccggcccccatcatggagcctgga
atccaaggctgcctgacccacttcagcctcatcactcatggctttggctctcccgccatc
tgcgccgccatgacctcgcttcagaactacctgaacgaggcgctcaaacaagtggacaag
atgtacctgagctctggcagcgacacccagggatcctcagacagtggaagcaaatctgca
gacaaaatggacaagcacaggaaatga
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