Cyclopterus lumpus (lumpfish): 117730278
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Entry
117730278 CDS
T09199
Symbol
zbtb40
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 40
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117730278 (zbtb40)
04121 Ubiquitin system [BR:
clum04121
]
117730278 (zbtb40)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
117730278 (zbtb40)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117730278 (zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
zf-C2H2_15
Zn_SUZ12
BTB_KLHL33
zf-C2H2_7th_ZNF462
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
Zn_ribbon_SprT
DUF7410
zf-C2H2_11
zf-MYST
Motif
Other DBs
NCBI-GeneID:
117730278
NCBI-ProteinID:
XP_034387731
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Position
5:complement(9469510..9477180)
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AA seq
860 aa
AA seq
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MLELPNYSSQLMQQLWALRKEGHFCDCTILVGDSPHRAHKLVLAASSMLFRSLLDDADTI
SIDTAMVSSLEFGCLLDMVYTGKLPLGKHNVGRIVAAADSLQMFDVAVGFRNVLTSLVSQ
QPTVPILSTQIPGHIVINKAQSMNPEGTVSPGEDSTSDKTELKAELEKNEGQSDSEDAEE
PACKRTCVELTQSSEAEEAKSSESVEKENNTTVAEASNGPATGFLEHSFQFVELLSNMSS
VLEQLSQAAERSLDEQERQVVAQCCEEEEEADPRLALERLVSRVKEGQLSEGAVLRLLHA
VQQKAAFPSLLSLVEEVERNSQRPEGNQTGVESEKQNGTSSEEKQEAEGEGSIKEETEDN
EKVANATPDSSPSPSSSSSKPYSCRWCKRGFAYKCRMLAHVRRCPHSQECEQQCPQCPEK
LANQRALQRHRAEAHRNTARAKKKKVACDLCGRTFAHPSGMIYHKRTEHFEEKPFVCEDC
GAKFGANSSLKNHMRLHTGEKPYRCKHCDMSYGVAAALAYHTKKKHSEGKMYVCQYCKAI
FAQSIELTRHVRTHTGDRPYVCRECGKGYSQASGLTVHLHTFHNLSEPHDCQKCCLSFSS
LEEHRQHIQEFHPKEFHKCPTCSKVFTSAALLEKHMGTHTGAKPFSCDLCNKSYQQLSGL
WYHNRTNHPEVFANHTRQLKSLVQCDVCFKFFPSAATVAKHQAAEHQGSTEAAAVVACPY
CPAVFGGEEEMQXHVGSQHGGQSAEAFSCPICSLACASQLELQEHLLSCHMETQEEQEVE
EEQASTSYTVIAADPTGNKRAEPILSEEQEQLAAAQQVFVALAGGREGELSTEVVEVNMY
DLLNSSVTFICEDKLPGPGS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgttggagctcccaaactacagcagccagctcatgcaacagctgtgggctctgaggaag
gagggacacttctgtgactgcaccatcctggtgggagacagccctcaccgtgcacataaa
ctggtactggccgcctccagcatgctcttcaggtctctcctggacgacgccgacaccatc
tccatcgacacagccatggtgtcctcgctggaattcggctgtctgctggacatggtctac
accggcaagctgcctctcggcaaacacaacgtgggccgcattgtcgctgctgcagacagc
ctgcagatgttcgacgtggcagtcggcttcagaaacgtcctcaccagtcttgtgagccag
caacccacagtcccaatcctctctacacagatcccaggccacatcgtgatcaacaaagca
cagagcatgaaccctgaaggtacagtttcacccggcgaggactcgacttcagacaagaca
gagcttaaggccgagctggagaagaacgagggtcagagtgacagtgaggatgcagaggaa
ccagcatgtaaaagaacctgtgtggagctcactcagtcctcagaggccgaagaagccaaa
tcctcagaaagtgtagaaaaagaaaacaacacaacagtagccgaagcatcgaatgggcct
gccactggttttctggaacattcctttcagttcgtggagctcctcagcaacatgtcgtct
gtcctggagcagctgagccaggcagcagagagaagcctggatgaacaggagagacaggtt
gtggctcagtgctgtgaggaggaggaggaggcagaccccagattagcgctggagaggctg
gtgagcagggtgaaggagggtcagctcagtgagggagcggtcctcaggctgctccacgcc
gttcaacagaaagctgccttcccctcactgctctctctggtggaggaggtggagaggaac
tcacagcggccggaaggaaaccaaactggagttgagtcagagaagcagaacggcaccagc
agtgaagaaaagcaggaggcagagggggagggaagcattaaggaggagacggaggacaac
gagaaggttgcgaatgccacgccagactcctccccttccccctcctcatcttcctccaag
ccctactcctgtcgctggtgcaagaggggtttcgcttacaagtgtcgcatgctggcccac
gtgaggcgctgcccccattcccaggagtgtgagcagcagtgccctcagtgtccagagaag
ctggccaaccagcgggccctgcagcggcaccgggccgaggcccaccgcaacaccgcccgg
gcaaaaaagaagaaggtggcctgcgacctctgcgggcggaccttcgcccacccatcaggc
atgatttaccacaagcgcaccgaacactttgaggagaaaccgttcgtgtgcgaggactgc
ggcgccaagttcggcgccaactcgtctctgaagaatcacatgaggctgcacacgggagag
aaaccgtaccgctgcaaacactgtgacatgagctacggggtggctgctgcacttgcatac
cacaccaagaagaagcactctgagggaaagatgtacgtgtgccagtactgcaaggccatc
ttcgcccagtccattgagctgacgcgtcacgtgcggacacacactggggatcggccctac
gtgtgcagagagtgcggcaaaggttacagccaggccagcggactcaccgtccacctgcac
acctttcacaatttgtcggaacctcatgactgtcaaaagtgttgtctgagcttctcctcg
ctggaggagcatcgccagcacatccaggagttccacccgaaagagttccacaagtgtccc
acatgtagcaaggtgttcactagcgctgccctgctggaaaaacacatgggcacacacacc
ggggccaagcccttcagctgcgacctctgcaacaagtcttaccagcaactgtcaggcctg
tggtaccacaacaggaccaaccacccagaggtgtttgctaaccacacgcgacagctcaag
tccctggtccagtgtgacgtctgcttcaagttcttccccagcgccgccactgtggccaaa
caccaggctgctgagcaccaaggctccacggaggcggcggcggtggttgcgtgtccgtac
tgcccggccgtgtttggcggggaggaggagatgcagngacacgtgggcagccagcacggc
ggccagagcgccgaggcgttcagctgcccgatctgctccctggcctgcgcctcccagctg
gagctgcaggagcacctgctctcctgtcacatggagacacaggaggagcaggaggtcgag
gaggagcaggcctccacttcctacacggtgattgcagcagatccaacaggcaacaaaagg
gcggagccaatcctctctgaggagcaggaacagctggcagctgcccagcaggtgtttgtg
gctctggcaggtgggcgagagggcgagttgtcgacagaggtggtggaggtcaacatgtat
gacctgctgaacagctcggtcaccttcatctgtgaggacaaactgccaggtcctggctct
taa
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