Cyclopterus lumpus (lumpfish): 117730286
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Entry
117730286 CDS
T09199
Symbol
rbm12
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117730286 (rbm12)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117730286 (rbm12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FRG2
Motif
Other DBs
NCBI-GeneID:
117730286
NCBI-ProteinID:
XP_034387743
Ensembl:
ENSCLMG00005021669
UniProt:
A0A8C3AX31
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Position
5:complement(23965963..23974352)
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AA seq
901 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETATPAAGNVNRQAGNAPIPTVQ
QGGGGRSSGHGNHGNQGFVNTPVSVTAASSSQEPSNKAVVSVMPSFPNSYSSAPTITAAL
ASLNAGPPPIPPLPSMPSMPPMPTLPTIPVPLPVSSLPPVPTVSPMSQGLSVSHMSHLSH
MSSMPPFNPSLPPPGGMGSGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAAAAAGAGMAH
PDELFVLLQNLPFSCSEMEVREFFRGLGVEGARLLRDGQGRPTGRAMVKFFSPQDSFEAV
KRGGGMMGQRFIEITPGSERQWASLNDGMISHAPHNSGKTNNINESQDQHHRRGNAMAGG
REQRGRSRSPHRQEFCVYLKGLPYEADKKQIKEFFTNLSIMEDSVYIAYGPNGRATGEGF
LEFRAEQDYKTALSAHMQYMGTRFIQVHPISRKGMLEKIDTIRKRESSQGDGKNQDGLKV
PRNCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDVHGNGLGQAIFQLRTEEDARKA
ERLHRQKLNGRDAFVHLVTFDQMKEIERNPPPQNKRGQRNQNQQNLNQNQHQQSQPSPQQ
PQINPFAGISGEEFNFLRNTMGNLNNAPFVTPFSAPGNGLAGPPPLPPLAAGLGEVNLGL
APPLVAGLPGAPILEPPGFRPGAAGGAPFSQDGLRGLVPFDNANRKGNGGGQTRGGGANN
NQGRPGGGATGGQQVFTPGTEGLRNQPAPGGSNNPNSQRGAPGPTIVKLQNMPFTVTVDE
IMDFFYGYQVLPGSACLQFSEKGLPTGEAMVAFQIHEEAAAAVMDLNDRPIGARKVKISL
G
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtcatcaggctgcagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggcctaaccatccctgacgggggagtgcacatcgtggggggtgagcat
ggcgaagctttcattgtcttcgccactgacgaagacgctcggctggggatgatgcgtaca
ggcgggtccatcaagggctccaaagtctcgctgttgcttagcagcaagacagagatgcag
aacatgattgaactcagccgccgtaggtttgaggctggggcgggcgctgtggagacggct
actcctgcagcaggaaatgttaatcgacaagcaggaaatgcccccatacccacagtgcag
caagggggaggagggagaagcagtggccatggaaaccatggaaaccaaggttttgttaat
accccagtctcagtgacggcagcaagctcatctcaggagccaagcaacaaggcagtggtc
agtgtcatgcccagcttccccaacagttacagctccgcccccacaatcaccgcagctctc
gcatcactcaatgcaggccccccacccatccctccacttcccagcatgccttccatgcct
ccaatgcccacgctgcccaccataccagttcctctcccagtgtcctcccttccccccgta
cctacagtctcccccatgtcccaaggactttcagtgtctcatatgtcccacctctcccac
atgtcctccatgcctcccttcaacccctccctccctcccccaggaggaatgggttcaggc
ctccctcttggaacccccaaccccatgcttttcaaccctctctcccctcttgcctctctg
ggcctccaggctcacatgaaggccgctgctgctgcagcggccggagctggaatggcccat
cctgatgagttgttcgttctcctgcagaacctccctttctcctgctcagaaatggaggtc
agggagttttttcggggtctgggggtggaaggggctcgcttgctgagggacgggcagggt
cggccaactggcagggctatggtcaagttcttctcgccccaagacagctttgaagctgtg
aagaggggaggtggcatgatgggccaaaggttcattgagatcacgccaggctctgagcga
cagtgggccagcctcaatgacggcatgataagtcatgctcctcacaatagcggcaaaaca
aataacatcaacgaatcacaggatcagcatcatcgccgtggtaatgctatggcaggaggc
cgagaacagcgaggaaggtcacgatctccacaccggcaggaattctgtgtctacctgaag
ggcctgccctatgaagctgacaagaaacagataaaggagttctttactaatctgtctatc
atggaggacagcgtctacattgcatatgggcctaatggacgagccacgggagagggattc
ctcgagttcagagcagaacaagactacaagactgctttgagtgctcacatgcagtatatg
ggcacccgcttcatccaggtccacccaatcagccgcaagggaatgcttgaaaaaatagac
accattcgcaaacgtgaatcgtcacagggtgatggcaagaaccaggatggcttgaaagtt
cccaggaactgtgcccatattactaacatcccttacaatgtctccaagaaggatgtccgt
gcctttctggagggtgtggggctttatgaggacacccttaaggttttgacagatgtccat
ggtaacggtttagggcaagctatctttcagctgcggactgaggaagacgcccgcaaggct
gaaagacttcaccgccaaaaactcaatggccgcgatgccttcgtccacctggtgacattt
gatcagatgaaggaaattgagagaaatcctcctcctcagaacaagaggggccaacgcaac
cagaaccagcagaacctaaatcagaaccagcaccagcaatcccagcccagtccccagcaa
ccgcagatcaacccatttgcggggattagtggagaggaatttaactttctccgaaacacc
atgggaaacctcaataatgccccctttgtgactccattctcagccccagggaatgggctc
gcaggccctcctcctctccctcctctggcagcagggctgggtgaagtgaatctgggcttg
gctcccccactagttgccggtcttcctggagctccaatcctggagccaccgggctttcga
cccggagcagcaggaggtgctcctttcagccaggatgggctgagagggttggtgcccttt
gacaatgcaaacagaaaaggaaacggaggaggacagaccagaggcggaggggcgaacaac
aaccaaggccgtcctgggggaggagctactggtggtcagcaggtgttcactccaggaacc
gaaggactccgtaaccagccagccccaggaggatctaacaatcccaacagtcaacgtggt
gctcctggcccgaccattgtaaagcttcagaacatgccgttcactgtcaccgtggacgag
atcatggacttcttctatggctaccaggtgctgccaggctccgcctgcctgcagttcagt
gagaaaggccttccaacaggcgaggccatggtggcgttccaaatccacgaggaggccgct
gccgctgttatggacctcaatgaccgacctattggagcacgcaaagtcaagataagcctg
ggttaa
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