Cyclopterus lumpus (lumpfish): 117730289
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Entry
117730289 CDS
T09199
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00450
Selenocompound metabolism
clum00970
Aminoacyl-tRNA biosynthesis
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117730289 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117730289 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117730289 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117730289 (mars1)
Enzymes [BR:
clum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117730289 (mars1)
Amino acid related enzymes [BR:
clum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117730289 (mars1)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117730289 (mars1)
Prokaryotic type
Other AARSs
117730289 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
GST_N_2
GST_N_3
Motif
Other DBs
NCBI-GeneID:
117730289
NCBI-ProteinID:
XP_034387749
Ensembl:
ENSCLMG00005009111
LinkDB
All DBs
Position
5:complement(18666578..18685237)
Genome browser
AA seq
926 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGVHCDVQYVNHEERVVPFLSRPALPALLLPGGLHLFSP
NAICRYLFEVSGQDASELCNRWLEWEATDLQPALLQFLHMAVLQGKGSEVSKVLQGPLNY
MEQSLSKGNTPYLTGEAVSVADVVLWAALYPVLSDPSLALGERTSVKAWFDRGAVMHSCQ
SAAQKVLQGKGLQGMKIFMQRQPAPQSSQCRGTQPCNSNPAEVEESERVVSVEEMEAASL
TWSKALTACPLATDRQHPILPQEGKRNLLVTSALPYVNNVPHLGNIIGCVLSADAFSRYG
RLRGWNILFVCGTDEYGTATENKAREEGLTPQQICDKYHVIHSDIYKWFQIDFDFFGRTT
TEKQTEIAQNIFWRIHKHGFLLEDTVEQLRCENCKRFLADRFVEGICPNCSYPEARGDQC
DKCGRLINAVELREPQCKVCRQTPVVRSSKHLFLDLPKLEAQLEQWLDKSTSTGDWTANA
KQITRSWLRDGLKPRCITRDLRWGTPVPHPDFKDKVFYVWFDAPIGYLSITANYTDQWEK
WWKNPNQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVSHLIATEYLNYEDTKFSKSR
GVGVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRGG
MFVTKFFEGIVPVMELQQEDKTLLALVGWELQQYIQLMDKVKIRDALRHILNISRHGNQY
IQVNEPWKKIKGGDTERQRAGTVTGVSVNVACLLSVMLLPYMPAVSQTIRDQLNAPPSCV
NTMLQGTGTFVCCLSAGHRIGTVSPLFQKLEVDQIEALKKRFGGQQPEDEPPKKKMTAQS
AGSTQPAAVPAAAAAMASVNGVDPEKAKQLTQAVTEQGEKVRALKTQKAEKAAITAEVAK
LLDLKKQLALAEGKSPEPAPQKGKKK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcgtcagtgaaggcaacccgcactgcctcaaggtgttagctgctttagaa
gtgaccggggttcattgtgacgtccagtatgtcaaccacgaagagcgagtggtgcccttc
ctcagccgtccagccttgccagccctgctcctgcccggtggtctgcaccttttcagtcct
aatgccatctgccgatacctgtttgaagtcagtggacaagacgccagtgagctttgcaat
cggtggcttgaatgggaggccacagatcttcagcctgcactgctacagttccttcacatg
gcagtgctgcaggggaaaggatcagaggtgtccaaggtcctccaaggacccctaaactac
atggagcagagcttgagcaaggggaacacgccatatttaactggggaagctgtttcagtt
gccgatgttgttttgtgggctgcgctgtaccccgttttatctgacccttcactagcattg
ggcgagcgcacgtctgtgaaggcttggtttgaccgcggggctgtcatgcacagttgccag
tctgctgctcagaaagtgctgcaggggaaaggcctgcagggcatgaagatcttcatgcag
aggcagcctgcccctcagagcagccagtgcagaggcacgcagccatgcaacagcaaccct
gctgaggttgaggaaagtgagcgtgtggtgtccgtagaggagatggaggcagcttctcta
acctggagcaaagctttgaccgcctgtccattggctacagacagacagcaccccattttg
ccacaggagggcaagcgaaacctccttgtgaccagtgccttgccgtacgtcaacaacgtc
ccccacctgggcaacatcattggctgcgtcctcagcgctgatgccttctccaggtatggc
cgtctgcgaggctggaacatcctgtttgtatgtggcacagacgagtatggcacagctaca
gagaacaaggccagagaggagggtctgacaccgcagcagatctgcgacaagtaccatgtc
attcactccgacatctacaagtggttccagattgactttgacttttttggcagaaccaca
accgaaaagcagacggagattgcccagaatattttctggagaatccacaagcatggtttc
ctcctggaagacacggtggagcaactgcgttgtgaaaactgcaagcgcttcctcgccgac
cgcttcgtagagggaatctgtcccaactgcagctacccggaagctcgtggtgaccagtgt
gacaagtgtgggcggctcatcaatgctgtggagctgagggaacctcagtgtaaagtctgc
aggcagactccagttgtacgctcctccaaacatctgttcttggacctgccaaagctagag
gctcagttggagcagtggctggacaagtcaaccagcacaggagactggacagcaaatgcc
aaacagatcactcgctcctggctgagagatggactcaaacctcgctgcatcaccagggac
ctgcgatggggaacgccagtaccgcatcctgactttaaagacaaggtgttctacgtgtgg
tttgacgcccccattggttatctgtccattaccgccaactacaccgaccaatgggagaag
tggtggaagaatcctaatcaggtggagctgtacaacttcatggccaaagacaatgtgcct
ttccacagtgtggtgtttccctgctctctactgggagcgcaggacaactacactctggtc
agccacctcattgccactgagtatctgaattacgaggacacaaagttctccaagagccgt
ggggtgggtgtgtttggagacatggccaaggatacgggcatcccttcagatgtgtggcgg
ttctacctcctctatgtgcgtccagagggacaggattcagccttctcctgggctgacatg
gctctgaagaacaactctgagctgctcaacaacttgggcaacttcatcaacagaggtggc
atgtttgtcactaagttctttgagggcattgtgcctgtgatggagctacagcaggaagat
aagacgctgctggctctggtgggctgggagctgcagcagtacatccagctcatggacaaa
gtcaaaatccgcgatgctctgagacacatcctcaacatctctcgccatggcaaccagtac
attcaggtcaatgaaccctggaagaagattaagggaggagacacagagagacagcgtgcg
ggcacggtcaccggtgtatctgtgaatgtcgcctgcttgctgtcagtgatgctgctgcca
tacatgccagctgtcagccaaaccatcagggatcaactcaatgcccctccgtcttgcgtc
aataccatgttgcaaggcactggcacctttgtgtgttgcctgagtgctggccaccgcatt
ggcaccgtcagtccgttgtttcagaaactggaggtggaccagattgaggctttgaagaag
agatttggtggacagcagcctgaagatgaaccacctaaaaaaaagatgacagctcagagc
gcaggtagcacccagccggccgctgtgccagcggccgctgctgcgatggcgtcggtgaac
ggagtggacccagaaaaagccaagcagctcacacaggctgtgactgagcagggggaaaag
gtgcgagcactcaaaacccagaaggcggagaaggctgcgatcacagcagaggtggccaaa
ctgttggaccttaagaaacagctggctctggctgaggggaagagccctgagcccgcacct
cagaaaggcaagaagaagtga
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