Cyclopterus lumpus (lumpfish): 117730300
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Entry
117730300 CDS
T09199
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
clum04137
Mitophagy - animal
clum04144
Endocytosis
clum04340
Hedgehog signaling pathway
clum04350
TGF-beta signaling pathway
clum04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117730300
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117730300
04350 TGF-beta signaling pathway
117730300
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117730300
04137 Mitophagy - animal
117730300
09144 Cellular community - eukaryotes
04520 Adherens junction
117730300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117730300
04121 Ubiquitin system [BR:
clum04121
]
117730300
03029 Mitochondrial biogenesis [BR:
clum03029
]
117730300
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117730300
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117730300
Autophagy
Mitophagy
Other mitophagy associated proteins
117730300
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117730300
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117730300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117730300
NCBI-ProteinID:
XP_034387776
Ensembl:
ENSCLMG00005023061
LinkDB
All DBs
Position
1:complement(7678446..7730210)
Genome browser
AA seq
775 aa
AA seq
DB search
MSSQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDNVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASCPPGEQRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHRVLNPSPNGSRVATDSQNTNLS
HPPQLKDQGGPGVPQQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHC
RIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLL
GKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSVPV
TEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKID
IADWKSNTRLKHCTLDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccaaggagtgaggagaaacggcccagtgaagctgcggttgacagtcctgtgt
gcaaagaacctggcaaaaaaagacttctttcggttgccagatccttttgccaaagtggtg
gtggatggctcaggacaatgccactctacagatactgtgagaaatacgctggacccaaag
tggaatcaacattatgatctatacatcggaaaggcagactcaatcaccatcagtgtatgg
aaccacaagaagatccacaaaaagcagggcgcaggtttcctcggctgtgtccgcctcctg
tccaacgccatcaacagactcaaagacactggctatcagagactggacctgaataagttg
ggccccaatgacaatgataatgtgagaggacaaatagtcgtaagtcttcagtccagagat
cgcattgggacaggagggccggtggtggactgcagtcgtttgttcgacaatgacttaccc
gatggctgggaagagaggaggacagcctctggaaggatacagtacctgaaccacatcaca
cgcaccacccagtgggagagacctacgaggccggcgtcggagtactccagcccatctggg
cggccgctgagctgcgtggtggacgagaacacgccagtgatgacgcccgttaatggggcc
gaggccagctgcccgccgggcgaacagcggatccaggagagacgggttcgatcgcagcgg
catcgcaactacatgagtcgaacacacctgcatacaccgcctgacctgcccgagggttat
gagcaaagaacaactcagcagggccaagtctacttcctccacacacagactggagtcagc
acctggcatgaccctcgggtgcccagggacctaagcaatgtgaactgtgaggagctgggt
ccactgccaccaggctgggagatcagaaacacagccacgggtcgcgtctactttgtcgac
cacaacaatagaaccacacagttcacggacccgagactatctgctaacctgcatcgtgtg
ctcaacccaagtccaaatggttcccgtgtggccacggacagccaaaacactaacctcagt
catccgccgcagctgaaggaccagggtggtcctggtgtccctcagcaggctctgtcccca
gcccagctgcccgaagaggccgagtgcctgactgtgcccaagtacaagagggacctggtg
cagaagctgaagatcctgcggcaggaactctcccagcagcaaccccaggccggccactgt
cgcattgaggtctgccgcgaagagatatttgaggagtcgtaccggcaggtgatgaagatg
cgtccaaaggatctctggaaaagactgatgatcaaattcagaggcgaagagggtctggac
tacggcggggtggcaagggaatggttatacctgctgtcccacgagatgctgaacccctac
tacggcctgttccagtactccagagacgacatctacactctacagattaacccggactct
gccgtcaacccggagcacctgtcatacttccacttcgtgggtcgcatcatgggcatggcg
gtgttccacggccactacatcgatggaggcttcactctgcccttctacaaacagctgttg
ggaaaaccgatcacgctggacgacatggagtccgtcgacccggacctccacaacagcctt
gtctggatcctggacaatgacatcactggcgtcctggaccacacgttctgtgtagagcac
aatgcctatggagaaatcatccaacacgagctcaagcccaatggcaagagtgtcccagtc
acagaggacaccaagaaggagtatgtcaggttgtatgtgaactggcgtttcctgcacggc
atcgaggctcagtttctggccctgcagaaaggcttcaatgaggttattcctcaacacctg
ctcaaatcctttgatgaaaaagaactggagctgatcgtgtgtggcctaggaaagatcgac
atcgctgactggaagtccaacacccgcctgaagcactgcaccctggacagcaacatcgtc
aagtggttttggaaagccgtggagtcgtttgacgaggagaggagggcccggctactgcag
tttgttactggctcctccagagtcccactgcaaggcttcaaggctttacagggtgctgca
gggcccagactcttcaccattcatcagatcgacgccaacgccaacaacctgcccaaagcc
cacacctgcttcaaccggattgacattccgccctacgagagctacgacaagctatacgac
aagctgctgactgcgatcgaggagacctgtggcttcgctgtggagtaa
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