Cyclopterus lumpus (lumpfish): 117730315 Help Entry 117730315         CDS       T09199                                  Symbol hcfc1a Name (RefSeq) host cell factor 1a isoform X1   KO K14966   host cell factor 1 Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum03083   Polycomb repressive complex clum04980   Cobalamin transport and metabolism clum05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:clum00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     117730315 (hcfc1a)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     117730315 (hcfc1a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     117730315 (hcfc1a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:clum01009]     117730315 (hcfc1a)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:clum03036]     117730315 (hcfc1a)    03029 Mitochondrial biogenesis [BR:clum03029]     117730315 (hcfc1a) Protein phosphatases and associated proteins [BR:clum01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      117730315 (hcfc1a) Chromosome and associated proteins [BR:clum03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      117730315 (hcfc1a)    HMT complexes     COMPASS/SET1 complex      117730315 (hcfc1a)     MLL-HCF complex      117730315 (hcfc1a)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      117730315 (hcfc1a) Mitochondrial biogenesis [BR:clum03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     117730315 (hcfc1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 fn3 Kelch_FKB95 Motif Other DBs NCBI-GeneID:  117730315 NCBI-ProteinID:  XP_034387815 Ensembl:  ENSCLMG00005012898 LinkDB All DBs Position 5:3156694..3169495 Genome browser AA seq 1762 aa AA seqDB search MSVTGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL NLDGMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSASPVQ PLNTPKSPAPAAVALSAQSLTQTAVLKVAAQQSATGTSIVTVRPSQPGKSPVTLTSLPPG VRMVVPAQTVQGTPIGGSPQMSGMAALAAAAAATQKIPPSSAGTLLNVPAGATILKTVAV SPGTTTMKMASPLMVSNPATRMLKTAAAQVGTATQSSPTTTRPIITVHKSGAVTVAQQAQ VVTTVVGGVTKTITLVKSPLTMGSGGTLISNLGKMMSVVQTKPQTSTITGQASNNPLAQL IQSKGALPAGTILKLVTSADGKPTTIITTSQAGGAGNKPTILNISGVSPATTKQGTTIIK TIPMSAIMGQAGAAGLNSRVTTSAGMKTPITILTTKMMTTGTPGKIITAMPKLATAAGQQ GLTQVVLKGAHGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGIATLGT VTGTVSSSLAGGTVDSSNASLVTPITTLGTIATLSSQVISPAAITVSAAQTNLTSASTLP SSTMTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTDAGAAGEGSGTVTL VCSNPPCETHETGTTNTATTSSAAMGAGQVCSNPPCETHETGTTNTATTSSAAMGAGPVC SNPPCETHETGTTNTATTSSAAMGAGPVCSNPPCETHETGTTNTATTASSNMSAPRVCSN PPCETHETGTTNTATTASSNMGGVQPPCSNPPCETHVTGTTNTATQSSSTMNAGQTSTVQ RVCSNPPCETHETGTTNTPSTATSSIGGDQTSTAAGQVQRVCSNPPCETHETGTTNTATT ATCSMETGEEAQQTEEGAEGTSSPEVATTTTAAAAAAATAAAATAAAATAAATVGMVTTA QGRAITTVTQSTPAPGPSVPSISSITEGVSTAAGSTEEPMQTDETTSAEAAEGAATAMET QAEGGAATATAMNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAI QAVLQAAQQAVMNEGNATGESQQPTSIPIMLTQQELAALVHQQQQLQLQEAQAAAQQAAV DSSVPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRATAETLAPSSTFAPSVSV ASPAKLQAAAALAEVANGIEGEKQAPQPTPVKPVAKKENQWFDVGIVKVTNMVVTHFYMP GDNSQGDDDSGVMPDYGQMKKMELQPGTAYKFRVAGINACGRGAFSEISAFKTCLPGFPG APCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYC GPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPA AKRPGTSPDTKATGPKKARTDQ NT seq 5289 nt NT seq  +upstreamnt  +downstreamnt atgtctgtcactggctccgcggtgtctgggaccacagcgtcggttctgcagccgcggtgg aaacgggtcctcggatggtccggtcccgttccccggcccaggcatgggcaccgagctgtt gctataaaggagcttatggttgtctttggcggtggaaacgaagggattgtggatgaattg catgtatacaacactgcaacgaaccagtggtttatcccagcggtccgtggtgatatcccc cctggttgtgctgcatatggttttgtctgtgacggcaccagattgctggtgttcggtgga atggtggagtacggaaagtacagcaatgatctctatgagctacaggccagcagatgggaa tggaaaaagttgaaagcaaaaaacccgaagaacggtccccctccttgccctcgtcttggc cacagcttctcgctggttggcaacaagtgctacctgtttggtggactagccaatgacagc gaagacccaaaaaacaacattcccagatacctgaatgatctgtacacacttgagcttcgc gcgggctccagcgtggttggctgggatatcccaatcacatacggcgttctgcctcctcct cgtgagagccacactgctgttgtatacacggaaaagacgagcaggaaatctcgcctcata atctacggaggaatgagtggttgtcgccttggagatctgtggacacttgatattgatacc ctgacatggaacaaaccatcagtaagcggcacggcaccgctccccagaagtcttcactct gccaccaccatcacaaacaaaatgtatgtttttggaggatgggttcctttggtaatggac gacgtcaaagtggccacacacgagaaggagtggaagtgcacaaacactctcgcctgccta aatctagacggcatgtgttgggagacggtgttgatggacacgcttgaagacaacatcccg agggcccgtgctggccactgtgctgtggccatcaattctagactctatgtatggagcggc cgcgacggttatcgtaaagcgtggaacaaccaagtctgttgtaaagacctctggtacctg gaaacagagcggccacacgcccctgccagggtccagttagtccgtgccaacacaaactct cttgaggtgagctggggtgccgtctcaactgccgacacctacttactgcagctgcagaaa tatgacatccctgcaactccagctgcagcctcgccagtcatgagtgccagccccgtgcag cctttgaacaccccaaagagccctgcaccggctgctgtagccctctctgctcagagccta acccagacagctgtcttgaaggttgcagctcaacagtctgccacgggcacgtctattgtc acagtccgccccagccagcctgggaaatcccccgtcactttgacatcccttccaccaggt gttcgtatggtagtgcctgcccagaccgtccaaggaacgccaattgggggtagccctcag atgagtggcatggcagctttggctgcagccgctgcagcaacacagaagatcccgccctct tctgcaggcactctcctcaatgttcctgcaggtgccaccattctcaaaacagtagccgtt tccccgggcacaaccacaatgaagatggcttctccactcatggtcagtaacccggccacc cggatgctgaagactgctgcagcccaggtgggcacggcgactcagtcctcccccaccacc accagaccaatcatcactgtgcacaagtctggtgcagtcacagtggcccagcaggcccag gtggtaaccactgtggtgggaggagtcaccaagaccatcaccctggtcaagagtccactc accatggggagcggtggcactctgatctccaacctcggcaagatgatgtctgtggtacaa accaagccgcagacatcaaccatcacaggccaggcttccaataaccctctcgcacagctc atacagtcaaagggtgccctcccggccggcaccatcctgaagctggtgacctccgcagat ggcaagcccacaaccatcatcaccacctcccaggctggaggcgcaggaaataagcccacg atcctcaacatcagcggcgtgtctccggctaccactaagcagggcaccaccattatcaag accatccccatgtcggccatcatgggccaggctggagctgcaggtctaaactcacgtgtg accaccagtgcaggcatgaaaacgccgatcacaatcctcaccaccaaaatgatgaccact ggaactcctggtaaaatcatcaccgccatgcccaaacttgccactgcagccggccaacag ggactgacacaggtggttctgaagggtgctcacgggcaaccgggaacgattctgcgcacc gtgcctatgagcacagtcggtggcgttcgacttgtcacaccagtgacggtatctgccgtt aagcccactgtcaccactctggttgtcaaggggactactggtattgccactcttgggacg gtcactggcacagtctcctcgagcctcgccggaggcacggtggacagttccaacgcctct ctggtcacccccatcaccacactgggaaccatcgccaccctgtccagccaggtcatcagc ccagctgccataactgtctcagctgctcagaccaacctgacttctgcctccacattgccc tcctccaccatgacggtgcaaaaccagcccacccaggtgactctgatcacaactcccagt ggtgtagaagctcaaccagtgcaggatctacccgtgtccatcctggcttcaccaacctca gagcagcccagctctactgatgctggagcagctggagaaggctctgggaccgtcaccctg gtctgctccaacccgccctgcgagacccacgagacgggaaccaccaacacagccaccacc tcctcagctgcaatgggagcaggacaggtctgttctaacccgccctgcgagacccacgag acgggaaccaccaacacagccaccacctcctcagctgcaatgggagcaggaccggtctgt tctaacccgccctgcgagacccacgagacggggaccaccaacacagccaccacctcctca gctgcaatgggagcaggaccggtctgttctaacccgccctgcgagacccacgagacgggg accactaacacggccacaactgcatcatcaaacatgtctgcgccgcgtgtatgctccaac ccgccgtgcgagacccacgaaaccgggacaactaacacggctaccacagcgtcgtctaac atgggaggagtccagccgccgtgctccaacccaccctgtgagacccacgtgacgggcacc accaacacagccacccagtcgtcctctaccatgaacgcaggccagacgagcaccgtgcag agggtgtgctccaacccgccctgcgaaacgcacgagacggggaccaccaacaccccgtcc acggccacctccagcattggcggcgaccagaccagcactgcggcaggccaagtccagagg gtgtgctccaacccgccctgtgaaacacacgaaactgggaccaccaacacagccaccact gccacctgcagcatggagacaggcgaagaagcccagcagacagaggagggagcggaaggt accagcagcccagaggtggccaccaccaccaccgctgctgcagcagcagcagcgacagca gcagcagcaacagcagcagcagcgacagcagcagcaacagttggcatggttaccacggct cagggcagggccatcactactgtcactcagtccacaccagcccctggaccctctgtacct tcgatctcgtcaatcacagagggcgtgagtaccgctgccggctccacggaggaacccatg caaactgatgaaacgacgtcagcagaagctgcagagggggcagccaccgcgatggaaaca caagcagagggaggagcagccacagctacggccatgaatctaccctcggagctgatgtct gagggtcagggtgccactctcatggtgaccgggctgtcggacgaggagctagctgtgact gcagcagcggaggccgccgctcaggcagcagccacggaagaagcccaagccctcgctatc caggccgtcctgcaggcagcccagcaagcagtcatgaatgagggcaatgccaccggagag agccagcagcccaccagcatccccatcatgttgacccagcaggaactcgcagcgctggtc catcagcagcaacagctgcagctgcaggaggctcaggctgccgcacagcaggccgccgtg gactcgagcgtgcccactgagggcctcgcccccgctgacagcctcaacgacccctctgtc gagagcaacgggcacaatgagatggccgcggccgtcaccagtgccgtggcgtcactgctg ccacgtgccacagctgagacacttgctccatcgagcacatttgcaccctctgtatcggtg gccagtccagcgaagctgcaggcagccgccgctctagcagaggtcgccaatgggatcgag ggagagaaacaagctcctcagccaactccagtgaagcctgttgcaaaaaaagagaaccag tggtttgatgttggaattgttaaagtgaccaacatggtggtcacccacttctatatgcca ggagacaattctcaaggagatgatgactctggcgtcatgccagactacggccagatgaag aaaatggagctgcagcccggcacggcttacaagttccgtgtggctggaatcaacgcttgc ggtcgcggcgctttctccgagatttctgctttcaagacttgcctaccaggcttcccaggg gcaccttgtgccatcaaaatcagcaagagcccagatggcgcccacttgacctgggagccg ccctcggtgacgtcggggaagatcatcgagtactctgtgtacctggcgatccagagcaac cagaccgccgaggccaaggcctccaccccggcacagctggccttcatgcgcgtgtactgt ggacccaacccctcttgcttggtgcagtcgtccagcctctccaacgcccacatcgactac accaccaagccggccatcatcttccgcattgccgcccgcaatgagaagggctacggtccc gccacccaagtgcgatggctgcaagaatccggcaaagatgccgcctctgcaaaaccggcc gccaaaagacccggcacctcccctgatactaaggctactggtccaaagaaagcgaggacg gaccagtga

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