KEGG   Cyclopterus lumpus (lumpfish): 117730326
Entry
117730326         CDS       T09199                                 
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117730326 (thoc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117730326 (thoc7)
   03041 Spliceosome [BR:clum03041]
    117730326 (thoc7)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117730326 (thoc7)
Spliceosome [BR:clum03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117730326 (thoc7)
SSDB
Motif
Pfam: THOC7 Zw10_N OVT1 MutS_III Suppressor_APC DASH_Dad2 Terpene_synth_C Peptidase_S46 Sec8_N OSTMP1 Peptidase_S10 V_ATPase_I FUSC
Other DBs
NCBI-GeneID: 117730326
NCBI-ProteinID: XP_034387843
Ensembl: ENSCLMG00005007730
UniProt: A0A8C2X7W5
LinkDB
Position
5:complement(5475013..5477620)
AA seq 203 aa
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSPGTPEEGFTQYQRMMGILAQ
CEFSMGKTLMVYDMNLREMENYEKIYTNIEQNITSAHDKIAECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSRTKENVDAKLELRKKQFHVLLSTIQELQQ
TLENDEKSDNDENNQESPALNGE
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggagctgttacagatgacgaggttattcggaaacgtcttctcatcgacggggacgga
gctggagatgaccgccgtatcaacgtgttgctaaagagtttcaccaaatggtgtaactcg
cccgggaccccagaggaagggttcacccagtatcagaggatgatgggcatactggcccag
tgtgaattctccatggggaagacattgatggtttatgacatgaatcttcgcgaaatggag
aattatgagaaaatctacactaatatagaacaaaacatcacgtctgcacacgacaagata
gcagaatgcaaaaaagaaatccagagggccaagagaatacggaaaaatcgccaagagtac
gatgctttagctaaggttatccagcaacaccctgaccgacatgaaaccctaaagcagttg
gaggcgcttgacaaagaactccagcaattgtctcgcaccaaggagaacgtagatgcaaag
cttgagttaaggaagaagcagttccatgtgctcctcagtaccatacaggaactacagcag
acccttgagaatgatgagaaatcagacaatgacgagaacaatcaggagagcccagcactg
aatggtgaatga

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