Cyclopterus lumpus (lumpfish): 117730353 Help Entry 117730353         CDS       T09199                                  Symbol stab1 Name (RefSeq) stabilin-1 isoform X1   KO K19020   stabilin-1 Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum04148   Efferocytosis Brite KEGG Orthology (KO) [BR:clum00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     117730353 (stab1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:clum00536]     117730353 (stab1) Glycosaminoglycan binding proteins [BR:clum00536]  Hyaluronan   Cell surface receptors    117730353 (stab1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Fasciclin EGF_3 Xlink EGF_STAB1-2 cEGF EGF_Teneurin Motif Other DBs NCBI-GeneID:  117730353 NCBI-ProteinID:  XP_034387917 Ensembl:  ENSCLMG00005018864 LinkDB All DBs Position 5:complement(23533302..23586307) Genome browser AA seq 2561 aa AA seqDB search MLMLLLLLLLCLQTSLQQQTPPPGRCDISQRVDMHTSCTSCAAVSSCPHGFSRGGTTNCS YVVEIGGREMTLDGCQHICAKGFMQPQCCPGHWGPLCLSCPSWSGKTCNFHGTCFDGDLG NGTCICDDGFSGFACQECKNQKVFGEKCDKECDCAHGLCNKGPEGDGECLCQPPYTGKRC DQVSSRCSNCSPYSYCKGVAADCECLPGYRRTAQGKCASICSPRDCDVNAQCSSQGSRVT CVCKPDYQGDGRICVPRNLCSENNGGCPINSTVCVFKGPNKSSCECMFGMSPVGGSAEFG CQLVSACSADTCDPTAVCQTELDGHPRCACEAGEIGDGHRCYGTLMERLIELDRSGSQRE NLTGAVAMFEKGCAMLLSHNGPFTAFIPVLKTPLTGVNEELVCKNHLILGQHLYKDLEGR DFHLYGGSRWRSKNNKRFILMENPSRLYNVIQEDLPAANGIIHIIDRPITNTRSDKSPRD EQFAEMTIGEILTKDDKFNRFLSLVDNCGSPPPLRGPGPLTVFVPTNEAVDKSRDGSILY MLHEDKYKLQELLRHHVFSQAEVSVDELTVLAQFQTMANQIVTITVSNDGEILLGEKGVH LHLTSTNIVASNGIIHMIDGLLYPPSILPILPHRCDVIESKIVVSPCVHCSYLYETACPD GTTEMASHQIGCDYVTSPLRPTLSKGCAKFCNATKKVAQCCKGFYGPDCKPCIGGFQHPC YDKGTCFDGIHGNGSCSCQPGLKGVACHICADPSKHGERCDEECRCVHGVCDNRPGSGGV CRRGSCMDGYSGDSCDKTATPCNSDGLQEHCHIHAYCTHAGLHTTCLCRDGYEGDGHSCS LVNPCLKSNRGGCHSNAECVFVGPGNTACLCIEGWTGDGRVCVEINNCQLESRGGCSLDA DCNHIGPGQSECVCKTGYMGNGILCDLINPCLKKNGGCHDLAHCEVSKEGGAHTCTCPDG YAGDGSICFGSLLEELDMNPKMYSFYRMTQKYSHISEDLDGNFTVLVPTREAIRNMSADQ DSFWNGRHHLPHFLRAHIVLGVYSMEDLDRMVGSRLPTMNPFTNWEISNNSGVIHIGNAS ILAHNLPAINGYIHIIDRILAPSRSHLPPEPPTLMAFLNSSSTFTLFRRHALLYNLSDDL SVFDFTLLLPTDDAIRQHLSRTNSSLLDPDVFRYHVILNELLFPDHLSDGTLKSTLLGSD YQVQFHLNDYNQTAVNDVPLNGTFTETQNGVIIVLPRVLKTRRNKCSKQVNLQVNGRCSD CEGPPRCLFSYKPIKEQFPANMRSNCKFRKRVGFRRKSMPGCVIKCLRLTTDHSCCPGYY GHECFKCPGGVGSWCSNHGECQDGNHGNGECRCFEGFHGTACEDCEPGRYGVNCSSKCVC NHGKCEDGLARSGRCVCYKGWKGASCSIEIKDDACGGVCDENANCITGPKGTAAACVCVA GYEGNGTYCKEMDLCSRSNGGCSEFSVCLRVSAGERTCTCGEGYIGDGVVCLEIDGCLVN NGGCHKSADCTRTGPNTTACSCRLGFQGPGRVCFPVNPCRTRNGGCSAHARCEYMGQGQR NCTCYRGHVGDGFNCRGNTNNEVFRKTENVFFRRMLSNSGTRGFQGDGPFTVFVPVEETN KNSIVDEWEQSGRLADLVRYHIVSCEVLTLSDLKTSKLAVAMSGHKLHFSLLQGSVWVNN RSRIVKSDYTTSNGVIHHIDTLLTPYRLQDKPSFQSKVMNFTSAAEFYGYSRFYKLVEDV GLLPMLQMSIHQPFTMFWPTDEALNSMPAERQQWLSSPDHRDQVASLVKAHIIRNARLLG VAQPEKYSSFRTMHGSTIKYHCDKTLVGAVWLNENAARVVERYLNFKEGIAYGIDQVLEP PGIGAFCDNLENKTTAARCGRCTFPPTCHSRHQDTGKTESCFNRSPPIGRRHSHWYPLDN PFSMMGCKRVCQFSSWVKKCCKNHYGRDCQVCPGGLEAPCSNHGYCDDGMQGSGRCRCFK GFIGKACELCAVSSYGPNCTGCNCGQHGRCDGGMEGSGKCFCNSGWQGDDCQINIGEFKH LIAINETLIPEECRRCHAQADCVPGSGCQCKPGFQGNGTFCDPEPPPDLCSEYNGGCHQN ADCNQTALLVNCTCHSGYQGDGYSCEPINRCTEEQNGGCSDFASCKFTGPNERQCECLPG FLGTGVQCLEKVVPPVDRCLEDNGGCDPAAICKDLHYHANTAGVFNLRSPDGKYKMNFSQ ADAACQAEGATLVNFKQLGDAQQLGMHLCVAGWMEGGMVGYPTRFPSLKCGDNHVGLVIY KEPVDQSSKYDAYCYRLRDVSCVCPAGYIGNGDFCNGVLTSVLATSSNFSIFYKLLLDYS GRSSEGKQLVQFMSHRKSELTLFVPHNAGFGANQTLSGRDLEYHVSTNHSIRPFKDLRHQ EVIVSRLGFNLTVTHGNNENSKLVNRRMLLEWDIPAANGIIHVIEGPLTAPPAPIPHHAS RGHAHSSGTVSAILVSVLLACVLAALGYYVFKHKTDAFRFHYFRDEDEDGAPGGRTKPTL VSIPNPLYSGSRAFSEPFGDAGPGMEPEEPEEPPKILDLDQ NT seq 7686 nt NT seq  +upstreamnt  +downstreamnt atgctgatgctgctgctgctcctgctgctctgcctgcaaacttcactgcaacaacagact cctcctcctggtcgctgtgatatctcacagagggtggacatgcacacctcctgcacctct tgtgccgccgtcagcagctgcccccacggcttcagcagggggggcacgaccaactgcagt tacgtggtggagatcggcggcagagagatgacgttggatggatgtcagcacatctgtgcg aaggggttcatgcagccacaatgctgcccaggtcactggggacctctttgtctctcctgt cccagctggtcggggaagacctgtaacttccacggaacctgtttcgatggagacctcggc aatgggacctgcatctgtgatgacggcttctctggttttgcctgtcaggagtgtaagaat cagaaggtctttggagaaaagtgcgataaagagtgtgactgtgcacatggactgtgcaat aaaggtccagaaggtgatggagagtgtttgtgtcagccgccgtacaccgggaagcgctgt gaccaagtgtctagcaggtgcagtaactgcagcccctactcgtactgcaaaggagtggcc gccgactgtgaatgtttgcccggatacaggaggacggcgcagggaaaatgcgcaagtatt tgctcaccgagggattgtgacgtcaacgcccagtgctcctcgcaggggtcaagggtcacc tgcgtctgtaagccggactaccagggcgacggcagaatctgcgtacccagaaacctttgc tccgagaacaacggcgggtgtcccatcaactcgaccgtctgtgtctttaaaggacccaac aagtccagctgcgagtgcatgttcggcatgtcccctgtaggtggcagcgctgagtttggc tgtcagctggtctctgcctgctcagcggacacctgcgaccccacagccgtctgtcagact gaactggatggacatcccaggtgcgcgtgtgaggcgggtgagattggtgacggacaccgt tgctatggtaccctgatggagcggctgatagagctggacaggagtgggagccagagagaa aatctgaccggagccgtcgccatgtttgagaagggctgtgcaatgctgctgagtcacaac ggacccttcacagcgttcatccccgtgttgaaaacacctctgactggtgttaatgaggag ctggtgtgtaaaaaccacctgatcctgggccagcacctctacaaggatctggagggacgc gatttccacctgtacggaggatccaggtggaggagcaaaaacaacaagaggttcatcctg atggaaaaccccagcagactgtacaacgtcatccaggaagacctgccggcagccaatggg atcatccacatcatcgaccggccaatcacaaacacacgttctgacaagtctcctcgtgat gaacagtttgctgaaatgacgatcggagagattctgactaaggatgacaaattcaaccgc ttcctgtcgctggttgataactgcgggtcaccaccccccttgcggggtcccggtcccctg actgtgttcgtccccaccaacgaggctgtggacaaatccagagacggcagcatcttgtac atgctgcacgaagacaaatataagcttcaggaacttctcagacaccacgttttctcccag gcggaggtgtccgtcgacgagttaacggttctcgcgcagtttcagacgatggccaatcag attgtcaccatcactgtgtctaatgatggtgagatcctactgggcgaaaagggcgtccat ctgcatctgacgagcacgaacatcgtggcgtccaacgggatcatccacatgattgacggg cttctgtacccgccctccatcctccccatcctgccgcaccgctgcgacgtcatcgagagc aaaatcgtcgtgagtccatgtgttcactgcagttacctctatgagactgcatgtccagac ggcaccactgaaatggccagtcatcagatcggctgcgattacgtcacgtctcccctccgg ccgacgctcagcaaaggctgcgccaagttctgcaacgccaccaaaaaggtcgcacagtgc tgtaaaggtttctatggtcccgactgtaaaccctgtatcggaggattccagcatccctgc tacgacaaaggaacgtgttttgacgggatccatggcaacggctcgtgcagctgtcagcca ggcctcaagggtgtcgcctgccacatctgtgcggatccatccaagcacggagaacgctgt gatgaagagtgtcgctgtgtccacggcgtgtgcgacaaccgtccgggcagcggcggcgtg tgtcggagaggatcctgtatggacgggtactccggagacagctgtgacaagacggccacg ccctgcaactccgacggcctgcaggagcactgtcacatccacgcatactgcacacacgcg ggcctgcacaccacgtgcttgtgtcgggatggatacgagggtgacggtcactcctgttcc ctcgtcaatccctgcctgaagagcaaccgtgggggctgccactccaacgcagagtgtgtg tttgtgggtccaggtaacacggcgtgtttgtgtatagagggttggacaggtgacggcaga gtgtgtgtggagatcaacaactgtcagctggagagtcgaggaggctgcagcctcgacgcc gactgcaaccacatcggacctggacagagtgagtgtgtttgtaaaacaggttacatgggg aacggtattttgtgcgacctcattaacccctgcctcaagaagaacggaggctgccacgac ctggcgcactgtgaggtctctaaggagggcggggctcacacctgtacctgtcctgacggc tacgctggagatggatccatctgcttcgggtcactactggaggagctggacatgaacccg aagatgtacagtttctaccggatgactcagaaatacagtcacatctctgaggacctggac gggaacttcacagtgttggttccgaccagagaagccattaggaacatgagtgcagatcag gactcgttctggaacggcagacaccacctgcctcacttcttgcgagcccacatcgtactg ggggtctactcgatggaagacctggacaggatggtgggcagcaggctgccaaccatgaac cccttcaccaactgggagatcagcaacaacagcggggtgatccacattggaaacgcctcc atcctcgcacacaacctgcccgccatcaatggctacatccacatcatagaccggattctg gctccatcccgctcacacctcccccccgagccccccaccctgatggccttcctcaactcc tcctccaccttcactctgttcagacggcacgctctgttgtacaatctgtcagatgatctg agtgtgtttgatttcacgctcctgctgccaacagatgatgccatccggcagcacctcagc aggactaactcctccctcctggaccccgatgtgttcaggtaccacgtgatcctcaacgag ctgctcttccccgaccacctgtctgacggcacgttgaaaagcaccctgctgggcagcgat taccaggtccagttccacttaaacgactacaaccagacggccgtgaacgacgttcctctt aacggcactttcaccgagacgcagaacggcgtcatcatcgtcctccctcgggtcctgaaa acccgacgcaacaaatgcagcaaacaggtcaacctgcaggtcaacggacggtgctcagac tgcgagggaccgcctcgatgcctcttcagctacaaaccgatcaaagagcagtttccggcc aacatgcgatccaactgtaaattcaggaagcgagttggattcaggaggaagtcgatgcca ggctgtgtcatcaaatgtcttcggttaaccacggatcactcctgttgccccggttactac ggccacgagtgcttcaaatgccccggaggcgtcggcagctggtgctccaatcacggggag tgtcaggacggtaaccacggcaacggggagtgccgttgctttgagggtttccacggcacc gcgtgcgaggactgtgagccgggacgatacggagtcaactgctcctccaagtgtgtgtgt aaccacgggaagtgtgaggacggtctggcaagaagtggcaggtgtgtttgttacaaaggt tggaaaggagcttcctgctctatagagatcaaggatgatgcctgtggaggtgtgtgtgac gagaacgccaactgtataacaggaccaaagggcacagctgctgcctgtgtgtgtgtggct ggatatgaaggcaatggaacttactgcaaagagatggatttgtgcagcaggtccaacggt ggatgttcagagttttccgtttgcttgagggtctcagcaggagagaggacctgtacctgt ggagaggggtacattggagacggggtcgtctgcctggagattgacggttgtctggtcaac aatggaggctgccacaagtcagcagattgcacccgaacgggccccaacacgacggcctgc agttgtcggcttggctttcaaggaccagggagggtctgtttccccgtcaacccctgcaga actagaaatggcggctgcagtgcgcatgctcgctgcgagtacatgggtcagggtcagagg aactgcacctgctacagaggccacgtgggcgatggcttcaattgccggggaaacaccaac aatgaggtgttccgcaaaaccgagaacgtcttcttccgtcgaatgttatctaactcaggc actcgtggttttcagggcgacggaccgtttaccgtcttcgtccctgtagaggaaaccaac aaaaactccattgttgatgaatgggagcagtccggtcgtctcgctgacctggttcgttac cacatcgtttcctgtgaggttttgaccttgagtgacctcaaaaccagcaaactcgctgtc gctatgtcaggacacaaactgcacttcagcctgctgcagggttcagtctgggtcaacaac cgctcgaggatcgtgaagagtgactacacgacttctaacggagtcatccaccacatcgac acgctgctgacgccctacaggctgcaggacaaaccgagcttccagtccaaggtgatgaac ttcacgtcagcagctgagttttatggctacagccgcttctacaaacttgtggaggatgtg gggttactccccatgctccagatgtccatccatcagccgtttaccatgttctggcccaca gacgaggccctcaactccatgccggctgaaagacagcaatggctctccagccccgaccac cgagaccaagtggcttccttagtgaaggctcacatcatacgcaacgctaggttgttgggt gtcgctcagccggaaaaatactcatcattccgcaccatgcacggatccaccatcaagtac cactgtgacaagaccctggtgggggctgtatggcttaatgagaatgcagccagggtagtg gagcgctacctgaacttcaaagagggcattgcctacggcatcgaccaggtactggaacca ccgggcattggagcgttctgtgacaacctggagaacaaaaccactgcggctcgctgtgga cgctgcaccttccctccaacctgccactccagacaccaagacacgggaaagacggagtct tgcttcaacaggtcccccccgatcgggcggcgccactcacattggtaccccttggacaat cctttcagcatgatgggctgtaagagagtatgtcagttttcttcctgggtcaaaaagtgc tgcaaaaaccactacggccgagactgtcaagtttgtccaggtggcctggaggccccttgt agtaaccacggttactgcgacgatggcatgcagggttcaggaagatgtagatgcttcaaa ggcttcatcggcaaagcctgcgaactgtgtgccgtgtccagctacggccccaactgcaca ggctgcaactgcgggcagcacggaaggtgtgatggaggcatggaaggttccggaaagtgt ttctgtaactccggctggcaaggcgacgactgccagatcaacatcggtgagtttaagcac ctgattgcaatcaatgaaaccttgatcccagaggagtgccggcggtgccacgctcaggcc gactgtgtgccgggttctggttgtcagtgcaaacccgggttccagggcaacggcaccttc tgcgacccagagccacctccagacctctgctcagagtacaacggcggctgtcaccaaaac gcagactgtaaccagacggcgctgctcgtcaactgcacctgtcacagtggttaccaagga gacggctactcttgcgagcccatcaacaggtgtaccgaagagcagaacggcggctgcagc gactttgcctcctgcaagttcaccggtccaaacgagcgtcagtgcgagtgcctgccgggg ttcttgggtaccggagtccagtgtctggagaaggtggtgccccccgttgaccgctgcctg gaggacaacggaggctgcgaccccgcggccatctgcaaggacctgcattaccatgccaac acggcgggagtcttcaacctgcgctctccagacgggaagtacaagatgaacttcagtcag gccgacgccgcctgccaggccgagggcgccacgctggtcaactttaaacagctcggagac gcacagcagctggggatgcacctgtgcgtggccggctggatggaggggggcatggtgggg tacccgacccgcttcccctccctcaagtgcggagacaaccacgtgggcctggtgatctac aaagagcccgtggaccagagcagcaagtacgacgcctactgctacaggctcagagatgtt tcgtgtgtgtgtcctgccggttacattggaaacggagatttctgtaacggcgtcctgacc agcgtcctcgcaacgtccagcaacttctccatcttttacaagttgttgttggactacagc ggccggtcctcggagggcaaacagctcgttcagttcatgtctcacaggaagtccgagctc acgctgtttgttcctcacaacgccggcttcggtgcaaaccagactctttctgggagagat ctcgagtatcacgtgtcgaccaatcacagcattcgaccatttaaagatctgagacaccag gaagtcatcgtatccaggctcggattcaacctgactgtcacccacggcaacaacgagaac tctaagctggtgaaccggcggatgctgttggagtgggacattcctgctgcgaacgggatc atccatgtgatcgagggcccgctgacggccccccccgcaccgatcccccatcacgcttcc cgaggccacgcccactcaagcggcacagtgtcggccatcttggtgtcggtgttgctggcg tgtgtgttggctgcactcggctactacgtcttcaagcacaagacggacgccttccgcttc cactactttagggacgaggacgaggacggtgcgccgggcggccggacgaagcccacgctg gtctccattcccaacccgctgtacagcggctccagagccttcagcgagccgtttggggac gccggtccggggatggagccagaagaaccggaagagcctccaaagattctggacctggac cagtag

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