Cyclopterus lumpus (lumpfish): 117730394
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Entry
117730394 CDS
T09199
Symbol
smpd2b
Name
(RefSeq) sphingomyelin phosphodiesterase 2 isoform X1
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00600
Sphingolipid metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117730394 (smpd2b)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117730394 (smpd2b)
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GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117730394
NCBI-ProteinID:
XP_034387969
Ensembl:
ENSCLMG00005017078
UniProt:
A0A8C3G5I5
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All DBs
Position
5:21363982..21371695
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AA seq
445 aa
AA seq
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MANSDSVNVRVLSLNCWGIRYVSKHTLQRYAMIGDMLCKEEHDVVLLQEVWSEKDYLSLK
KKLACSHPHSHHFKSGVIGSGLAIFSKHRIHETFLYRYSLNGYPYMAQHGDWFGGKAVGM
AVLKFGSLTANVYVTHLHAEYCRDKDSYLPHRVVQAWELQQFVRHTSVGADVVILGGDLN
MHPQDLGNRLLMSYTGLRDSYLESAKFDGCENGMTLIADNPFIDKKELAPFEKGIRIDYI
LFKGSSKTDVYCDFMSTTKGAVHDHPFPYSDHEALTSVLRLETQTPTETECDGQRASKEQ
DSAAGKVAELVDIVTEARTEVKVGLHCAERMRYTASRTGVMGLALLFLELAIAAVPWLAL
GAEQPFPRTSFYLLAALCFAILITTALLYVFYTMELKSLQGAEDQMRLAVGSLQEKLRGF
PLAQPHNAHLRPPVGPEPGVFNPEE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctaactcagactctgtcaatgtccgggtcctctctctgaactgctgggggatccgc
tacgtgagcaaacacactcttcagcgctatgccatgattggagatatgctgtgcaaggaa
gagcatgatgttgtcttactgcaagaggtgtggagtgagaaggactatctctccttgaaa
aagaaacttgcctgtagtcatcctcactctcatcacttcaaaagtggagtcatcggcagt
ggactggccattttctccaaacacagaatccatgagacgtttctataccgctactcactg
aatggttatccctacatggctcaacatggcgactggtttggaggtaaagctgttgggatg
gcggtcttaaaattcggcagcctgactgcaaacgtctacgtgactcatctgcatgcagag
tactgcagagacaaggactcctacctacctcaccgcgtggttcaggcctgggagctgcag
cagttcgttcgccacacctctgttggagcagacgtggtgattctaggtggcgacctcaac
atgcaccctcaggacctcggcaacagactactgatgtcttacactggactccgagactct
tatttagagtctgctaaatttgacggatgtgagaatggtatgactctcatagctgacaac
ccttttatcgataaaaaggagctcgctccctttgagaaaggaattcgaatcgactacatc
ctgttcaagggatcttccaaaacggacgtttattgtgatttcatgtcgaccaccaaaggc
gccgtccacgaccatccgttcccgtactcggaccacgaggctctgacttctgtgttgaga
cttgagacccaaactccaactgagaccgagtgtgacgggcaaagagcatcaaaggagcag
gactctgctgcaggcaaggtggctgagttggtggacattgtgaccgaggcgcgtactgaa
gtcaaagtgggcttgcactgcgctgagaggatgcgctacacggcgtcacgtaccggagtg
atggggctggctctgctgtttctggagctggccatcgccgctgtgccctggttggccctg
ggagcagagcaacctttccctcgtacctccttctacctgctggctgcgctgtgcttcgcc
atcctgatcaccaccgctctgctgtacgtcttctacaccatggagctgaaatctcttcag
ggggctgaagaccagatgaggctggctgtaggaagtctgcaagagaagctccggggtttc
ccgctggctcagccccacaacgcccatctgagacccccagtgggtcccgagcccggcgtc
tttaaccccgaggagtag
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