Cyclopterus lumpus (lumpfish): 117730414
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Entry
117730414 CDS
T09199
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117730414
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
General mRNP proteins
117730414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
RRM_7
PRP38_assoc
PRD1_P5_spike_N
Motif
Other DBs
NCBI-GeneID:
117730414
NCBI-ProteinID:
XP_034388010
Ensembl:
ENSCLMG00005003893
UniProt:
A0A8C2WPZ9
LinkDB
All DBs
Position
5:complement(25602451..25608987)
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AA seq
498 aa
AA seq
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MADDLDIEAMLEAPFRKEDLKNQSPDGPEERTKSVPDRKKHSRDRKRSRDKKRSRSRERK
SSRSRDNKRRSRSRERRSSRERGGRYRDHHQNRKRSKSKSPPIRKEKSPLRQPVDNLSPE
ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRKSKGIAYIEFVETNSVP
LAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAANNLQKGSSGPMRLYVGSLHFNITEEM
LRGIFEPFGRIESIQLMMDGDTGTSKGYGFITFADAECAKKALEQLNGFELAGRPMKVGN
VTERSDAFSSFLDSDELERSGIDLGTTGRLQLMARLAEGTGLQMPPAAQQALQMSGVIAF
GAMAAVSAAMNPTLNMNSAPMSLPSQPLATHCFQLSNMFNPKFEDVPGWEMDIQHDVIEE
CNKHGGVVHIYIDKNSAEGNVYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHN
LFPESAVTTLPLAPPPRR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacctggacatcgaggcgatgctggaagcgccattcagaaaggaggactta
aagaaccagagccccgacggcccggaggaacgcaccaagagtgtgcccgacaggaagaag
cacagccgcgacaggaagcgcagccgcgacaagaagcgcagccgcagccgagagcgcaaa
agcagccgcagccgagacaacaagaggaggagtcgcagcagagagcgccgcagcagcaga
gagagggggggtcgctaccgagaccaccaccagaaccgtaagcggtccaagagtaagagc
ccccccatccggaaggagaagagtccactcaggcagcccgtagataacctgagtccagag
gagcgcgatgcccggaccgtgttctgcatgcagctcgccgcccggatacgaccccgagac
ctggaggacttcttctctgctgtcgggaaggtccgcgacgtgaggatgatctccgacagg
aactcccgcaagtcgaagggcatcgcctacatcgagttcgtggagaccaactcggttcct
ctggccatcgggctgacggggcaaaggctgctgggagttcccatcatcgtacaggcctcg
caggcagaaaagaaccgagcagcagcggcggccgcagcagccaacaacctgcagaagggc
tcatcgggaccgatgaggctctacgtcggctcgctgcacttcaacatcacagaggagatg
ctgagagggatctttgagccctttggacggattgagagcatccagctgatgatggacgga
gacacaggaacctctaaaggctacggcttcatcacgtttgccgacgcagagtgtgctaag
aaggctctggagcagctgaacggcttcgagctggcgggtcgtcccatgaaggtcggcaac
gtgacggagcggtccgacgccttctcctcgttcctcgacagcgacgagctcgaacgcagc
ggcatcgacctcgggaccaccgggcgcctgcagctgatggcccggctcgccgagggtacc
ggtctacagatgcctcctgccgctcagcaggctctgcagatgagcggagtaatcgctttc
ggagctatggccgctgtgtcagctgctatgaacccgactctcaacatgaactctgcaccg
atgagtcttccctctcagccactcgccacacactgtttccaactgtccaacatgttcaac
cccaagtttgaggacgttcccggttgggagatggacatccagcacgacgtcatcgaggag
tgtaacaaacacggaggagtcgttcacatctacattgacaagaactctgctgagggaaac
gtttacgtcaagtgtccatcaatccccgctgccatggcggcggtcaacgctctacacgga
cggtactttgctggtaagatgatcaccgcggcgtacgtccctctgcctacctaccacaac
ctgttcccagagtccgccgtcaccacgctgccgctggccccgcccccgcgacggtga
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