KEGG   Cyclopterus lumpus (lumpfish): 117730417
Entry
117730417         CDS       T09199                                 
Name
(RefSeq) nuclear factor 7, ovary-like
  KO
K12012  tripartite motif-containing protein 35
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117730417
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117730417
SSDB
Motif
Pfam: PRY zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-B_box zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 SPRY zf-RING_5 Prok-RING_4 zf-rbx1 zf-RING_6 zf-Nse zf-RING_10 U-box DUF4618 PEHE Lipoprotein_2 HisK-N-like zf-ANAPC11 DDOST_48kD UPF0242
Other DBs
NCBI-GeneID: 117730417
NCBI-ProteinID: XP_034388016
Ensembl: ENSCLMG00005002418
LinkDB
Position
5:complement(24890221..24893241)
AA seq 481 aa
MASRSEDLSCSICQDVFKDPVVLSCSHSFCKDCLKRWWREKLTQECPVCNRRSSRSEPPV
SLVIKNLCESFLLQRDQRAPETLCSLHSEKLKLFCLDHQQPVCVVCRDSEKHTDHRFKPI
DEAAEDLKEELQRSLKPLKEKLKLFEQVKGNCDQTAEHMKVQVQHTERQIQDQFKKLHQF
LEEEEEARISALREEEEQKSGVMKEKMEALSRGIAALSDTVRATEDELRAEDVSFLNNYK
AAVERVQQRPLLEDPQLLSGALIDEAKHLGNLTFNIWSKMKDLVSDSPVVLDPNSAHPDL
ILSEDLTSVRGGERQKLPENQERSNNFKPILGFVSRTQCWDVSVKDSASWFLGVAKEPVE
RNGSMWSRIWRIGFSHGKYKAFAPLAPPIVLSEPKKLQMIRVNLDWDRGLLSFSDPNTNT
HIHTFTHTFTEKVFPYFSGRDEFPTEAVGDGGKCAERVVPDDDRPERQLWRVWLSGAAGR
P
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcttccagatcagaggatctctcctgctccatctgccaggacgtcttcaaggatccg
gttgtcctgtcctgtagccacagcttctgtaaagactgtctgaagagatggtggagagag
aaactaactcaggagtgtccagtttgtaacagaagatcctcaaggagtgaaccgcctgtt
agtttggtgataaagaacctgtgtgagtccttcttactgcagagagaccagagagctcca
gagactctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcag
ccggtgtgtgtcgtctgcagagattcagagaaacacaccgaccacagattcaaacccatc
gatgaagctgcagaggatctcaaagaggagctccagagatccctgaagcccttaaaggag
aaactgaagctgtttgaacaagtcaaaggaaactgtgatcaaacagcagaacacatgaag
gtccaggtccaacacacagagagacagattcaggatcagtttaagaagcttcatcagttt
ctagaggaggaagaggaggccaggatctctgctctgagggaggaagaggagcagaagagt
ggggtgatgaaggagaagatggaggctctgagcagagggatagcagctctttcagacaca
gtcagagccacagaggacgagctgagagctgaagacgtctcgttcctcaacaactacaag
gctgcagtggaaagagtccagcagcgccccctgctggaggatccacagctgctctcagga
gctctgatagacgaggccaaacacctgggcaacctgaccttcaacatctggagcaagatg
aaggacctggtctccgacagtcctgtggttctggacccaaactctgctcatccagacctc
atcctgtctgaagacctgaccagtgtcagaggaggagagagacagaagcttcctgaaaac
caagagaggtctaataactttaaacccatccttggttttgtctcaaggactcagtgctgg
gatgtgagcgttaaagacagtgcatcttggtttctgggtgtggcaaaagagcctgttgag
aggaacggaagtatgtggtctagaatatggagaatagggttctctcatggtaaatataaa
gccttcgcccctttggccccaccgatcgttctatcggaaccgaagaagctccagatgatc
cgagtgaatctggactgggaccgaggactactgtcgttctctgaccctaacaccaacaca
cacatacacaccttcacgcacaccttcaccgagaaggtgtttccatacttcagcggtcgc
gatgaattcccgacagaggcagtaggcgacggtgggaaatgcgcggagcgcgtcgtgccc
gatgacgatcgtccggagaggcagctgtggcgggtgtggctcagcggtgcagctggtcgc
ccgtag

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