Cyclopterus lumpus (lumpfish): 117730417
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Entry
117730417 CDS
T09199
Name
(RefSeq) nuclear factor 7, ovary-like
KO
K12012
tripartite motif-containing protein 35
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117730417
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117730417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
SPRY
zf-RING_5
Prok-RING_4
zf-rbx1
zf-RING_6
zf-Nse
zf-RING_10
U-box
DUF4618
PEHE
Lipoprotein_2
HisK-N-like
zf-ANAPC11
DDOST_48kD
UPF0242
Motif
Other DBs
NCBI-GeneID:
117730417
NCBI-ProteinID:
XP_034388016
Ensembl:
ENSCLMG00005002418
LinkDB
All DBs
Position
5:complement(24890221..24893241)
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AA seq
481 aa
AA seq
DB search
MASRSEDLSCSICQDVFKDPVVLSCSHSFCKDCLKRWWREKLTQECPVCNRRSSRSEPPV
SLVIKNLCESFLLQRDQRAPETLCSLHSEKLKLFCLDHQQPVCVVCRDSEKHTDHRFKPI
DEAAEDLKEELQRSLKPLKEKLKLFEQVKGNCDQTAEHMKVQVQHTERQIQDQFKKLHQF
LEEEEEARISALREEEEQKSGVMKEKMEALSRGIAALSDTVRATEDELRAEDVSFLNNYK
AAVERVQQRPLLEDPQLLSGALIDEAKHLGNLTFNIWSKMKDLVSDSPVVLDPNSAHPDL
ILSEDLTSVRGGERQKLPENQERSNNFKPILGFVSRTQCWDVSVKDSASWFLGVAKEPVE
RNGSMWSRIWRIGFSHGKYKAFAPLAPPIVLSEPKKLQMIRVNLDWDRGLLSFSDPNTNT
HIHTFTHTFTEKVFPYFSGRDEFPTEAVGDGGKCAERVVPDDDRPERQLWRVWLSGAAGR
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaggatctctcctgctccatctgccaggacgtcttcaaggatccg
gttgtcctgtcctgtagccacagcttctgtaaagactgtctgaagagatggtggagagag
aaactaactcaggagtgtccagtttgtaacagaagatcctcaaggagtgaaccgcctgtt
agtttggtgataaagaacctgtgtgagtccttcttactgcagagagaccagagagctcca
gagactctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcag
ccggtgtgtgtcgtctgcagagattcagagaaacacaccgaccacagattcaaacccatc
gatgaagctgcagaggatctcaaagaggagctccagagatccctgaagcccttaaaggag
aaactgaagctgtttgaacaagtcaaaggaaactgtgatcaaacagcagaacacatgaag
gtccaggtccaacacacagagagacagattcaggatcagtttaagaagcttcatcagttt
ctagaggaggaagaggaggccaggatctctgctctgagggaggaagaggagcagaagagt
ggggtgatgaaggagaagatggaggctctgagcagagggatagcagctctttcagacaca
gtcagagccacagaggacgagctgagagctgaagacgtctcgttcctcaacaactacaag
gctgcagtggaaagagtccagcagcgccccctgctggaggatccacagctgctctcagga
gctctgatagacgaggccaaacacctgggcaacctgaccttcaacatctggagcaagatg
aaggacctggtctccgacagtcctgtggttctggacccaaactctgctcatccagacctc
atcctgtctgaagacctgaccagtgtcagaggaggagagagacagaagcttcctgaaaac
caagagaggtctaataactttaaacccatccttggttttgtctcaaggactcagtgctgg
gatgtgagcgttaaagacagtgcatcttggtttctgggtgtggcaaaagagcctgttgag
aggaacggaagtatgtggtctagaatatggagaatagggttctctcatggtaaatataaa
gccttcgcccctttggccccaccgatcgttctatcggaaccgaagaagctccagatgatc
cgagtgaatctggactgggaccgaggactactgtcgttctctgaccctaacaccaacaca
cacatacacaccttcacgcacaccttcaccgagaaggtgtttccatacttcagcggtcgc
gatgaattcccgacagaggcagtaggcgacggtgggaaatgcgcggagcgcgtcgtgccc
gatgacgatcgtccggagaggcagctgtggcgggtgtggctcagcggtgcagctggtcgc
ccgtag
DBGET
integrated database retrieval system