Cyclopterus lumpus (lumpfish): 117730452
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Entry
117730452 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase gamma-like
KO
K16667
receptor-type tyrosine-protein phosphatase gamma [EC:
3.1.3.48
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117730452
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117730452
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117730452
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
RNA_pol_3_Rpc31
DNA_pol_phi
Ly49
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
117730452
NCBI-ProteinID:
XP_034388063
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All DBs
Position
5:complement(9817219..10226325)
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AA seq
1430 aa
AA seq
DB search
MWRLLHSCCCCWWIFSLILLAFVLLRAECHPALTGSQAESQAPIQGLRRAVADGTRLRRA
ATEETYWAYSGIYGPDEGWASAYPECRERNQSPINIMDQDTKVSTEYQELTLEGFDTESS
NKTSMKNNGKTVAIMLKDEYFVRGAGLPGRFKAEKLEFHWGPNNGSEGSEHSINGHRYPV
EMQIYMYNSDDFDSLSAALREKRIIAAMVVFFQVGGKDNPAVDPIIHGLKGVVHHEKETV
LEPFVLKDLLPSALGSYYRYTGSLTTPPCSKVVEWIIFSRPIFVSYKQLEAFYSIFTTEQ
QDHVKSVEYLRSNFRPIQSLDNRHVYKSAVKDAWLPDLTDSGSGPYGTEASKVCSSAPIN
MKVQHVNSSALVVRWARPEVIYHPPILHFLVSYSWTSHDDSYEETHLTDAKHKLEAVISP
VSPDVLYLFRVQAICMNDMRSDFSQSMLFRANTTRIFEGTRIVKTGMPTVSPASSADMAP
ISSGSSTWTSSGIPFSFVSMATGIGPSSSGSQATVASLVTSTLLAGLGFSGGVISSFPSS
VWPTRAPTHSHNSARQTTEPTEPAKDATTSASAVTTAAAKDTSETGGEDRENSKDQEEDE
EREGEDKDEEEEEEEKEEKRERKGSGGVGEAGRKGNSTAKNEPSSKTPDATAKEKKQTKP
DPARMSPLEDQLEVYTHNPLDINSTISTEAVNEMAEFPVPNDPAATLRPCSGRDKKHWPF
SIHTDRPSAGTNLTHQTRPGTGAGLGRVEWLVPLVVVSALTFLCLVLLLAVLVYWRRCFQ
TAHFYVEDSNSPKVVPNETIPVIPIPDDMEAIPVKQLIKHISELYSNNQQGFSEDFEEVQ
RCTADMKITSEHSNHHGNKHKNRYINIVAYDHSRVKLRPMAGKDSKHTDYINANYVDGYN
KPNAYIAAQGPLKSTFEDFWRMVWEQNTCIIVMITNLVEKGQRKCDQYWPTENSEEYGNM
VVTLKSTNAHACYTVRRFILHNTKVKKGGKGNPKALSQGERIVLQYHYTQWPDMGVPEYT
LPVLTFVRRSSASQMPDMGPMLVHLLRRSRTGTYIVADSMLQQIKDKSTVNVLGFLKHIR
TQRNYLVQTEEQYIFIHDALMEAILGNETEVTASQLHSYFNSITTPGHSGRTHLEKQFKL
VKQCNTRFMECFNAQKECNKEKNRNSFVVPSEQARVGLAPLPGIKGTDYINASYVMGYYR
SNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPANHGLAEDEFVYWPSREEAMNCEAFT
VTLISKDRLCLSNEEQISIHDFILEATQDDYVLEVRHFQCPKWPKPDAPISSTFELINVI
KEEAATRDGPTIIHDELGAVSAGMLCALTTLSQQLESEGAADVYQVAKMINLMRPGVFTD
IDQYQYLYKALLSLVSTKENGSCFLTRDTNGTMASMSDQPDQAESIESLV
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctactgcattcgtgttgttgctgctggtggattttctcactcattctgctt
gccttcgtgctcctccgggccgagtgtcatcctgcgctgacaggaagccaagccgagtca
caagcccctatccaaggccttcgcagagccgtggccgacgggacacgactccggagagct
gccaccgaggagacctactgggcctactcaggtatatatgggccggatgaaggctgggca
tcagcctacccagaatgcagagagagaaaccagtcaccaatcaacattatggaccaggat
accaaagtatccacagagtatcaggaactgacactggagggcttcgatacggaatcctcg
aataagacatctatgaagaacaacggcaaaacggtggccatcatgttgaaggatgagtac
tttgtacggggagcaggtctaccagggaggtttaaggcagaaaaattggagtttcattgg
ggtccaaacaacggatctgaaggctcagagcacagcattaacggccaccgttaccccgtg
gagatgcagatctacatgtacaattcagatgactttgacagcctcagtgcagctctgagg
gagaagaggatcatcgcagctatggttgtgttttttcaggtgggggggaaggacaatcct
gctgtggacccaataatccacggcctgaagggagtggttcatcatgaaaaagagactgtc
ctggagccatttgtgctgaaggacctgctgccgtctgcgctgggaagttactatcgctac
accggctctctaacaaccccgccctgcagtaaagtggtggagtggatcatcttcagcaga
cctatctttgtctcctacaaacagttggaggctttctactcgatcttcactacggagcag
caggaccatgttaagtcggtggagtatctgcgcagcaacttcaggcccatccagagcttg
gataaccgccacgtctacaagtcagcagtcaaagacgcctggctgcccgacttgactgac
agcggcagcgggccgtatggcacggaggcgtccaaagtatgcagcagcgctcccatcaac
atgaaggtgcagcatgtgaacagcagtgctctggtggtgcgctgggctcgtcctgaggtc
atctaccatccgcccatcctccatttcctggtgtcctacagctggacgagccacgacgac
agctacgaggagacgcacctcactgacgccaaacacaaactggaggcagtcatatctccc
gtctcccccgatgtgctgtacttgtttcgagttcaggccatctgcatgaacgacatgcgc
agtgacttcagccagagcatgctcttcagagcaaacaccaccaggatctttgaggggacg
aggattgtgaaaactggaatgccaacagtgtctccagcctcctcagccgacatggctccc
atctcctctggctcatctacttggacctcctcaggtatccccttctccttcgtatccatg
gcgacaggaatcgggccgtcctcaagcggtagtcaggcaacggtggcgtccttggtgacc
agcactttactggccggcttgggcttcagcggcggtgtcatctcctctttccccagctct
gtttggccgaccagagcgccaacccatagccacaactctgcacgccagaccactgaaccc
actgagcccgccaaagacgccaccacttctgcctctgctgtcacaacagccgcagccaaa
gatacgagtgaaactgggggtgaggaccgagagaacagcaaggatcaagaggaggatgaa
gagagggaaggagaggataaggatgaagaggaggaagaagaagaaaaagaggagaaaagg
gagaggaagggatcaggaggtgtgggcgaggcagggagaaagggcaacagtacggcaaag
aatgaaccgtccagcaagacaccggatgcaactgcaaaagagaaaaaacagactaaaccg
gatccagctcgcatgtcacctttagaagaccaactggaggtgtatacccacaatccactt
gacatcaactcaactatcagcacagaggcagtcaatgaaatggcagaattcccagtcccc
aacgacccagcagcgacactcagaccctgctcaggaagggacaagaagcactggcctttc
tccatccacactgaccgtccaagtgctgggaccaacctgacccaccagacaagacccggt
actggtgcgggactgggccgcgtggagtggctggtacctttggtggtggtttcagctctg
acgttcctctgccttgttctactgctggctgtgctcgtctactggaggcgctgtttccag
acagcccatttctatgtggaagacagcaattcacccaaggtggtacccaatgagacaatc
cctgtcatccccattccagatgacatggaggctattccagtcaagcagttaatcaaacac
atctctgaactctactcaaataaccaacaaggattctctgaggattttgaggaggttcaa
cggtgcactgctgatatgaagatcacatcagagcactccaaccaccatggcaacaagcac
aagaacagatacatcaacatagtggcctatgaccacagcagggtgaagcttaggccaatg
gctgggaaggactccaaacacaccgactacatcaatgccaactatgtggacggttataat
aagcccaacgcttacatcgcagctcagggacctcttaagtccacctttgaggacttttgg
cggatggtgtgggagcaaaatacctgcatcatcgtcatgatcaccaacttggtggagaaa
ggacagagaaaatgtgaccagtactggccaacagagaacagtgaagagtacggcaacatg
gtagtcacactgaaaagcactaatgctcatgcctgctacaccgttcgccgcttcatatta
cacaacactaaagtcaaaaagggcgggaaggggaacccaaaagcactgtcccagggtgaa
cggatcgtgctccagtatcattacacccagtggcccgacatgggtgtccctgagtacacc
ctgcctgtcctcacgtttgtccgcaggtcttcggcctcccagatgcctgacatgggaccc
atgcttgtccacttgctgcgtcggagtcggacggggacgtacattgtcgcagacagcatg
ctgcagcagatcaaagacaagagcacagttaatgtactcggcttcctcaaacacatacgc
acccagcgcaactacctagtccagactgaggagcagtacatcttcatccacgatgccttg
atggaagccattttggggaatgagacagaagtgacagccagccagcttcacagctacttc
aacagcatcacaacaccaggacacagtggacggacacatctggagaaacagttcaagttg
gtaaaacagtgtaataccagattcatggaatgcttcaacgctcagaaggagtgcaacaaa
gagaaaaatcgaaactcctttgtggtgccatcggagcaagcgagggtcggcctagcacct
ttgcccggcatcaaaggcaccgattacattaacgcctcttacgtcatgggttactatcgg
agtaatgagttcatcataacccagcatcctctgccccacaccacaaaagacttctggaga
atgatctgggaccacaatgcacaaattattgttatgctgcctgccaaccatggactggca
gaggatgagtttgtgtactggcccagtcgggaggaggccatgaactgcgaggcgttcact
gtcaccctcatcagtaaagaccgactttgtctgtccaatgaggagcagatcagcatccac
gacttcatcctggaagctacacaggatgactacgttttagaggttcgtcactttcagtgc
cccaagtggccgaaacccgacgcacccatcagcagcaccttcgagcttatcaacgtcatt
aaagaggaggccgccacccgcgatggaccaaccatcatccacgatgagttgggagcagta
tcggccggcatgctgtgtgccctcaccacactgtctcagcagctggagagcgagggcgcc
gccgacgtctatcaagtggccaagatgatcaacctcatgaggccaggagtcttcacagac
attgaccagtaccagtacctctacaaagctctgctcagcctcgtcagcaccaaggagaac
ggctcgtgttttctgaccagagacactaatgggactatggcgtccatgtccgaccagcct
gaccaggcagagagcatagagtcattggtctga
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integrated database retrieval system
