Cyclopterus lumpus (lumpfish): 117730455
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Entry
117730455 CDS
T09199
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117730455 (ppfia4)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117730455 (ppfia4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
117730455
NCBI-ProteinID:
XP_034388065
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Position
5:complement(11019497..11085899)
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AA seq
1193 aa
AA seq
DB search
MMCEVMPTINEGDSAGPPRGTSGVPNGSDQEANFEQLMVNMLDERDKLLESLRETQETLI
QSQTKLQGALHERDVLQRQINAALPQEFATLTKELNICREQLLEKEEEISELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERL
RVALERVATLEVQLAVNTQELNMVRQRKDGDSMERTDGSKPTWKRLPNGSIDAHDDGSRV
SELQELLDRTNKELAQSREHSASFNGRMADLEAELANARRELSRSEELSIKQQREQRERE
DMEERITTLEKRYLAAQRETTHIHDLNDKLENELATKDSLHRQSEEKVRQLQEMLEMAEQ
RLAQTIRKAETLPEVEAELAQRVAALSKAEERHGNVEERLRQLESQLEEKNQELGRARQR
EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNSLIQDLENCQKQLEEFHHT
RERLIGEIEKLRNEIDHLKRRSGAFGDGTHPRSHLGSSSDLRFSVVEGQDGHYSTTVIRR
AHKGRMSTLRDDPNKVCAVFEQDYPSLRGSVSHLLGSDIEAESDLDDDVSSTLLSPSGQS
DAQTLALMLQEQLDAINEEIRMIQVERESADLRSDEIESRVNSGSMDGLNVTLRPRALPT
SATAQSLASSSSPPTSGHSTPKHHSRNASHHLGIMTLPSDLRKHRRKVASPVEVDKATIK
CETSPPSSPRSLRLETNFAQFTGSLEDGRGKQKKGIKSSIGRLFGKKEKGRLEQTVARDG
QPLPALTDFEMGIGDTMTLGKLGTQAERDRRMKKKHELLEDARKRGLPFANWDGPTVVSW
LELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTS
PSAPLTSRTSSGNVWVTHEEMENLASSTKAENEEGSWAQTLAYGDMNHEWIGNEWLPSLG
LPQYRSYFMECLVDARMLDHLTKKDLRSHLKMVDSFHRASLQYGIMCLKRLNYDRKDLER
RREDSQHEMKDVLVWTNEQVIHWVLSIGLREYSSNLLESGVHGALISLDETFDYSSLALI
LQIPMQNTQARQVMEREFNNILALGTDRQLEEQSGDDKSFRRSPSWRKRFRAREGGVGLG
MMAGSMETLPAGFRMPSMMPPSVSLMSKKQLQPEAPPPATPRLDPSTVRTYSC
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccatcaacgagggagactcggctggtcctcccagaggc
accagcggcgtcccgaacggctcggaccaggaggccaacttcgagcagctgatggtcaac
atgctggacgagagggacaagctcctggagtccctcagggagactcaggagaccctcatt
cagtctcagacaaagctgcagggggcgctgcacgagagggacgtgctccaacggcagatt
aacgccgcgctgcctcaggagtttgcaaccctgacgaaggagctgaacatatgccgggag
cagctgctggagaaagaggaggaaatatcggagctgaaagctgaaagaaacaacaccagg
ctgctgttggagcacctggagtgtctggtgtctcgtcacgaacgcagtctgaggatgaca
gtggtgaagagacaggcacccccaccatctggagtctccagcgaggtggaggtcctcaaa
gccctgaagtcgctgtttgaacaccacaaggctctggatgaaaaggtacgtgagaggctt
cgtgtggctctggagagggtggccaccctagaggtacagctagcagttaacacacaagag
ttgaacatggtgagacaaaggaaggatggtgactcaatggagcgaacagatggatccaaa
cctacatggaagagactacccaacggctccatagatgcccacgatgatggcagccgggtg
tccgagcttcaggagctgctggatcggaccaataaggagctggcccagagccgtgagcac
tctgccagtttcaacggccgcatggccgacctcgaggcagagctcgcaaatgcacgccga
gaactgagccgcagcgaggaactgtcaatcaaacaacagcgggaacagagagagagggag
gatatggaggagaggataacaacgttagagaaacgctacctggctgctcagcgggagacc
acacacatccacgacctcaacgacaaactggagaatgaactggccacaaaggactcactg
caccgacaaagcgaggagaaggtgcgccagctgcaggagatgctggagatggcagagcag
aggctggctcagaccataaggaaggctgagacacttccagaggtagaggctgaactggca
cagagagtagcggcactttccaaggctgaagagcgccatggcaatgtggaggagcggctt
agacagctggagtcacaactggaggagaagaaccaagagctaggaagggctcgtcagaga
gagaaaatgaatgaagagcacaacaagcgtttgtcagacaccgtggatcgtctgctcact
gagtccaatgaaagactgcagctccatttgaaggaacgcatggctgccctggaggacaag
aactccctcattcaggaccttgagaactgccagaaacagcttgaagaattccaccacacc
agggaacggctgattggagagattgagaagttgagaaatgagattgaccatttgaaacgt
cgcagtggggcgtttggagatggaactcaccctcggtcacacctgggcagctccagtgac
cttcgcttctctgtggtggagggccaagatggccactacagcacaactgtgattaggcgg
gcacataagggcagaatgtcaacgctacgagatgacccaaacaaggtgtgcgctgtgttt
gaacaggactacccgtctctgcgtggaagcgtcagccacctcctcggcagcgacatcgag
gcagagtcagacctggatgatgacgttagctcgacccttctttcccccagcggccaatct
gacgctcagactctcgctctaatgctgcaggagcaactcgatgctatcaatgaagagata
aggatgatccaggtggaaagagagtcagcagacctccgctctgacgagattgagtctcgc
gtgaacagcggtagcatggacggactcaacgtgacgcttcgaccccgggcactgcccacc
tccgccactgctcagtccctggcatcatcctcttccccccccaccagtggtcactccaca
cctaaacaccactcacgcaacgccagccaccatctaggcatcatgactctgccaagcgac
ttgaggaaacaccgcaggaaagtagcatctccagtggaagtggacaaagctactatcaag
tgtgaaacatcgcctccctcgtctccccgcagtttacggctagaaaccaattttgcgcag
ttcacaggcagtctagaggatggccgaggcaagcagaagaaaggaatcaagtcatctatt
ggccgattgtttgggaagaaggagaagggtcgattggagcagactgtagccagagatgga
cagcctctaccggccttaacagactttgagatgggcatcggtgacacgatgactctggga
aaactgggtacacaggctgagagggaccgcaggatgaagaaaaaacacgagcttttggaa
gacgctagaaagagaggcctgccatttgccaattgggacggcccaactgttgtctcgtgg
ctagagctgtgggtgggtatgccagcgtggtacgtggcagcctgtcgtgccaatgtgaaa
agcggtgccatcatgtcagctctgtctgacacagagattcagagggagattggcatcagc
aaccctttgcaccgactcaaactccgcttggccatccaggagatggtgtccctcaccagt
ccatctgcaccacttacctccagaacgtcctccggaaatgtgtgggtgactcatgaagag
atggagaacctggcttcctccactaaagcggagaatgaggagggcagctgggcacagacg
ctggcgtatggtgatatgaatcatgaatggatagggaacgagtggctgcccagcctcggc
ctgcctcagtaccgctcatacttcatggagtgtctggtggacgcacgcatgctggaccac
ctgaccaagaaggacctgaggagccacctcaagatggtggacagcttccatagggctagt
ctgcagtatgggattatgtgcttgaagagactcaattatgacaggaaagacctggagcgc
cggagagaggacagccaacacgaaatgaaagatgtgttggtgtggaccaatgagcaggtt
atccactgggtcctgtccattggtttgagggagtatagcagcaacctgctggaaagcggc
gtccacggagcgctcatctctctggacgagaccttcgactacagcagcctcgcgctcatc
ctgcagatccctatgcagaacacacaggcccggcaggtcatggagagggagttcaacaac
atattagcccttgggaccgaccgccaactagaggagcagagtggggatgacaagtctttt
cggagatctccatcgtggcgcaaaaggtttcgggcacgcgagggaggggtgggcctcggc
atgatggcgggctccatggaaacgctgcctgccggtttccgcatgccctccatgatgccg
ccctctgtgagtttgatgtccaagaagcagctccagcctgaagctcctcccccggcgacc
ccgagactcgatccctcaaccgtgcggacctattcatgctaa
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