Cyclopterus lumpus (lumpfish): 117730467
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Entry
117730467 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like
KO
K17848
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04068
FoxO signaling pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117730467
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117730467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117730467
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117730467
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
PH_6
Ank_5
PH_11
PH_4
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
117730467
NCBI-ProteinID:
XP_034388083
LinkDB
All DBs
Position
5:12261826..12274357
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AA seq
1145 aa
AA seq
DB search
MSKAGNPQRRTTYLISLTLVKVEAVPEDVAGNQREALPEGEGSPKKKEEEVSNAPEKDEG
PVCIQVGEIENTPVGEEVEQVQYCKQMVKVYGGTSEGAVRREGPRSDAMRPKTELYREPP
MLFLKGENGADLNIRSRCSLPFSIPPQVSQRPEVLMRSHAGGNSACWRELREANTSLYHS
ARTLDRRDNRFGDQSPLMAATTLGPYRASWADSDGRGTLIRPGAPISGGFSGIMTRDSPQ
GERFKTVSVSLPAPPAIDVYRSQRKGTSRTLDNSDLHSLSEDLKKGKEGQGGTIQRAPPR
DRKMLKFISGIFTKSTAVTASVSTTPPLYPAVERGSSEEEAACTSSQEWTLNQTVQELHL
VILGGLCSGKSALVHRHLTGSYLQLENAEGRQYIKDVLVDGQSHLLIIREETELQGAQVA
CNWLDAVILVFSLENEASFQKXLQNLPQLATHRPVSEIPFIVVGTQDKISSTNPRVIDDT
RARQLCSDVRRCTYYETCATYGLNVNRVFTDAAQKIMAAKKQAALSASCKSLPNSPSHSG
GSTPVSASNGGQSSDYSSSLPSTPVISPKEIGKTVRGEKHDSATPGSVRSATRRRTSRFV
GRRGSDSNRRSADCKGDLGSGRSIPIKQGILLKRSGNSLNKEWKKKYVTLSNDGILSYHS
SVNDYMLNAPGKEMDLLRVAVKVPGKRPPRAVPACGLPVGLNGRVKDTPGPEGVASSLLQ
VEEMEGLGGALFLRGNRGVQRCPSTLSNHAQSVDSAVEGVSSSSSTKDVGSSSPLTDRKK
HRRKKSMNQKGDANIGQADAKRKMWKLKSFGSLRNVSKTDEDNFDFLIVSSTGQTWHFEA
QSVEERDAWVQAIESQILASLQLCESSKNKARKNSQSEAVVLQAIRNAKGNNFCVDCDAS
NPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDLPRELTLVLSAIGNYMVNSIWE
ARTLGSRKPAPDATREERESWIRAKYEQKLFVAPLPPPTPREGPDVTLSGRLLLAVMEHN
LPKLLLLLAHCTKEDINAPLSLALSCRSLLALRLPGSPLHAACQQADVVMTQLLVWYGCD
VRLRDXQGHTALVLARSAGCQECVDXLLQYGCPNEPASPSPSPRQSRTRSGGASLSYSTS
RRAVS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcaggcaacccacagagacgcaccacctacctaatttccctcactctggtg
aaggttgaggctgtgccagaggatgtagcagggaaccagagagaggctcttccagagggg
gaagggagccctaagaagaaggaggaggaggtgagcaatgcccctgaaaaggatgaagga
cctgtatgtatacaagtgggtgaaatagaaaacacaccagtgggagaagaagtggaacag
gtgcagtattgcaagcaaatggtcaaagtgtatggaggaacctctgagggggctgtgcgc
agagaggggcctcgctcggacgccatgcgccctaagacggagctctaccgagagcctccc
atgctgttcctaaaaggcgaaaatggagcagacctgaacattcgatcacgttgcagcctc
cctttttccatcccaccacaggtcagccagcgtcctgaagtcctgatgaggtcacatgca
ggaggcaactctgcatgctggagggaactcagagaggccaatacaagcctgtatcactct
gctaggactttggatcgaagggataaccgcttcggggaccagtccccattaatggcagct
acaactctggggccttacagggcgtcctgggccgacagtgacggcaggggcacgctcatt
cgccccggagctcccatcagcggaggattttcaggcattatgaccagagacagccctcag
ggggagagatttaagaccgtctctgtttccttgcctgcacctcctgccattgatgtgtac
aggtctcaaagaaaaggtacaagtcgtaccctggacaacagcgacctacattccctctct
gaggacctgaagaaggggaaggaaggccagggaggaacaatccagcgcgctcctccccgt
gacagaaagatgctcaagttcattagtggcattttcactaaaagtacagcagtgacagcc
agcgtcagcaccacacctccgctctatcctgcagtggaaaggggctcgagtgaggaggaa
gctgcatgcaccagcagtcaagaatggaccctgaaccaaactgtccaagagcttcacctg
gtaattttgggaggtctgtgtagtgggaagtccgctctggtccacagacacttgacagga
agttaccttcagctggagaatgctgaggggcgccaatacattaaggacgtcctagttgat
ggacagagccacctgttgataatcagagaggagacagaactccagggtgctcaagtggct
tgcaactggttggatgcagttatcttggtcttcagtttggaaaatgaggccagcttccag
aagnntttacagaatctaccacagctggccacccaccggcccgtttctgagatacctttc
atagtagttggtactcaggataagattagcagcaccaaccccagagtaatagatgatacc
agggccagacagctctgctcagatgtgcggcgctgcacctattatgaaacctgtgcaacg
tacggcctcaatgtgaaccgagtcttcactgacgctgctcagaagatcatggcagccaag
aagcaagctgctctctcggcttcctgtaaatctctcccaaactctcccagtcactctgga
ggttccaccccagtgtcggccagtaacggtggtcagagcagtgattactcttcatccctt
ccctcaactcctgtgatcagtcctaaagaaatcggcaaaacagtgagaggggaaaagcac
gacagtgccacgcctgggtctgtccgcagtgccacccggagacgcacctccagatttgtg
ggtcggagaggcagtgactctaacagaaggagtgcagactgtaagggagatctgggaagt
ggacgctccattcccatcaaacagggcatcttgctaaagcgcagtgggaactcgctcaac
aaagagtggaagaagaaatatgtcacactgtccaacgatggcatactgtcctatcactcc
agtgtcaatgactacatgctgaatgcacctggcaaggagatggacttgctgcgagtggcg
gtgaaggtaccaggaaagcgaccacctcgtgctgtacctgcctgcggccttccagtcggg
ctcaacgggcgtgttaaagacacgccgggacctgagggtgtcgccagcagcctcctgcaa
gtggaggaaatggaagggctgggtggggcactgtttctgaggggcaacagaggcgtgcag
cgatgtccttctacactctccaaccacgctcaaagtgttgactctgcagttgaaggtgtg
tccagctcatcctccactaaagacgtaggttcctcatccccgttgacggacaggaagaag
catcgcagaaagaagagcatgaaccagaaaggagatgcaaacattggacaagcagatgcc
aagcgcaaaatgtggaaacttaaaagctttggtagcttaagaaacgtaagcaagacagat
gaagataactttgacttcctcatcgtgtcgagcaccggccagacgtggcactttgaagcc
cagagtgtggaggagagggacgcctgggtccaagccattgagagccagatcctggccagc
ctgcagctgtgtgagagcagcaaaaataaggcccgcaagaacagccagagcgaagcagtg
gttctgcaggcgatccgcaacgcaaagggcaacaacttttgtgttgactgtgatgcttca
aatccaacctgggccagtctgaacctgggcgctctcatatgcattgagtgttcagggatc
cataggaacttggggacccacctgtcgcgtgttcgctcgctagacctcgatgatctgcca
cgagagctcacgctggttctcagtgccatcggcaactacatggtcaacagcatatgggag
gctcgcacgctgggcagccgtaaaccggcacccgatgctacacgtgaggaacgggagtcg
tggataagagccaaatatgagcagaaactgtttgtggcgccgttgccgcctcccactcct
cgcgagggcccagacgtcacactatctggccgtcttcttctggcagtgatggagcacaac
cttcccaagctgctgctccttttggcccactgcactaaggaggacattaatgcccctctc
agcctggcgctctcctgcaggtcactcttagcgttgcgactgcccggctctcccctgcac
gctgcctgtcaacaggctgatgtggtgatgacgcagcttcttgtttggtatggctgtgat
gttcggctccgggatnttcaggggcacacagctctggttctggctcgcagtgctggctgc
caggagtgtgtcgatnatctactccagtacggatgcccaaatgaaccggcctctccttct
ccgtcgccacgacaatctcgcacaagaagcggcggcgccagcttgagttacagcacctct
agaagagcagtgtcataa
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