Cyclopterus lumpus (lumpfish): 117730481
Help
Entry
117730481 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04218
Cellular senescence
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
clum04270
Vascular smooth muscle contraction
clum04530
Tight junction
clum04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117730481
04020 Calcium signaling pathway
117730481
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117730481
09144 Cellular community - eukaryotes
04530 Tight junction
117730481
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117730481
09153 Circulatory system
04260 Cardiac muscle contraction
117730481
04261 Adrenergic signaling in cardiomyocytes
117730481
04270 Vascular smooth muscle contraction
117730481
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117730481
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117730481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117730481
NCBI-ProteinID:
XP_034388100
Ensembl:
ENSCLMG00005012746
LinkDB
All DBs
Position
5:complement(14851379..14902695)
Genome browser
AA seq
2123 aa
AA seq
DB search
MSANGPAPDPAPVAPEAPPASTPAPAPAPAPAPAAAPAPVAPPAPPAPPAPVSSTIPVGA
LAQKKRQQYAKSKKQGSNANSRPPRALFCLNLNNPIRRACISLVEWKPFDIFILIAIFAN
CMALAVYVPFPADDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNM
LDFVIVVIGLFSVVLELLTKEEKPEAEGDINHPSMHGHGGSKPGGGFDVKALRAFRVLRP
LRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGSD
MIAEEEPAPCAISGHGRQCPINGSECREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWT
DVLYWVNDAIGWETPWIYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLRE
KQQLEEDLKGYLDWITQAEDIDPDNEDEAEEETKRNRVTLADLTEKKKGRFGWFSQSSDT
HASVPASETESVNTENQNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRNCRLAVKS
VPFYWLVIILVFLNTLTISSEHYNQPMWLTQVQDVANKVLLAMFTCEMLVKMYSLGLQAY
FVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVAS
LLNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQIL
TGEDWNAVMYDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLN
TDDGDKKGGKKEEVKDDKEDEEENDPAAEEEDPEVPSGPRPVISDLVKKEKITPIPEGSA
FFIFSRTNPFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYA
FTAIFTVEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRV
LRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCT
DEAKSSSEECKGTYILYKDGDVNQPTIHRRMWHNSEFNFDNVLMAMMALFTVSTFEGWPS
LLYKAIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKN
CELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQ
HYGQSALFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIA
ITEVNPTETPQVDEQGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQA
LPYVALLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQ
EIMLACISGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDY
LTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACK
RLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLL
DQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPMQNNTAIALQAGLRTLH
DIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQR
PLQVQPPPHYAHMEQPVGRLSRANAMSHPNHHHHHHHHHHRHHNSYGKSPKSTNINLNNA
NVSSLPNGGHHRYYEHAPPNGYPGLRNAYYDYDKPRTPQGQRRRYYETYVRSHGVDGHHP
TIRREEEFDEDRLSGEYYSGEEFYEDDSMLSGDRYQNSDTEYETPKGYHHPDSNYDDDEQ
PLYRDSRRSPKRRMLPATPQGHRRPSFNFECLRRQSSQDELPHQRTALPLHLMQHQVMAV
AGLDSSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDHPHRDSAASSQVSVRKS
SWYTDDQEFSQRMYSPVNLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVA
ATKHEIADACEMTIDEMESAASHLLNGGIAPSANGVNVFPLLTPRDYELQDTAASYSDEE
PETEPRAPYEEDLADEMICITTL
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggcccgccccagacccagcccccgtggccccagaggcccctcctgct
tcaacccctgcccctgcccctgcccctgcccctgcccctgctgcggccccagcccctgtg
gcaccaccggcacctcctgccccgcctgccccagtgtccagcaccatcccggtcggtgcg
ttggcacagaagaagcggcagcagtatgccaaaagcaagaaacagggcagtaacgccaac
agcaggccaccaagagctctgttctgcctcaacctcaacaaccccatacgcagggcctgc
atcagcctggtggagtggaagccatttgatatatttatattaattgctatttttgccaac
tgtatggccttagctgtctatgtccccttccctgcagatgactccaactccacaaaccat
gacctggaaacggttgagtatgccttcctcatcattttcacaattgagacctttctgaag
attatcgcttatggtttggtgatgcaccagaatgcgtatgtgagaaacggttggaacatg
ctggatttcgtcattgtcgtcataggactcttcagtgttgtgctggagcttttgaccaaa
gaagagaagccagaagctgaaggagatatcaaccatccgtcaatgcacggacacggaggt
agtaaaccaggtggtggattcgatgttaaagcccttcgagccttccgtgtgctgcgaccc
ctgcggctggtctcaggagtacccagtttacaggtggtgttgaactccatcattaaagcc
atggtacctctccttcacattgccctcctggtcttgtttgtcatcatcatctatgctatt
atcggcctggagcttttcatcggtaaaatgcacgcaacctgctttattcctggctcagat
atgatagcagaagaggaaccagctccatgtgcgatctcagggcacgggcgccaatgcccc
atcaacggcagcgagtgtagggaaggctggcatggtcccaatggtggcatcaccaatttt
gacaacttcctgtttgccatgctgacagtgtttcagtgtatcaccatggagggctggacg
gatgtgctgtactgggtcaatgacgccatcggatgggaaacaccgtggatttattttgtt
agcctgatcatactgggatcctttttcgtgttaaaccttgtgttaggtgtgctaagtgga
gagttctccaaggagagagagaaagccaaagctcgaggagacttccagaagctgcgtgag
aagcagcagctggaggaggatctgaaaggttacttggactggataactcaggctgaagac
atcgaccccgacaacgaggacgaggccgaagaggagaccaagcgcaaccgggtgactctg
gctgaccttactgagaagaagaaaggaaggtttgggtggttcagccagtcgtccgacact
catgcgagcgttccagccagtgaaacagaatccgtgaacaccgagaatcaaaatggggag
gatgaaaagacaccatgctgtggacctctgtgtcaaaaaatttcaaagtcaaagttcagt
cggcgctggcgccgctggaacaggttctgccgcaggaattgccggttggctgtcaaatcg
gtgcctttctattggctggtcatcatcctggtgttcctcaacacactcaccatatcatca
gagcattacaaccaacctatgtggctgacacaagtgcaggacgtggccaacaaggtcctg
ctcgccatgttcacatgtgagatgttggtgaagatgtacagtctcgggctacaggcctac
tttgtgtcactgttcaaccgctttgactgctttgtggtttgtggaggaatcacggaaacc
attctggtcgagctggaaatcatgtctcctctcggcatctctgtgttccgctgcgtccgc
ctgctgaggatctttaaggtcacacgtcactggcagtctctaagcaacctggtggcgtct
ctgctcaactccatgaagtccatcgcttctctgctgctgctgctcttcctcttcatcatt
atcttctccctgctgggcatgcaggtgtttggtggaaagttcaactttgatgagacccag
accaaaaggagcaccttcgacaactttccccaggcccttctcactgtgtttcagatcctg
accggagaagattggaacgccgttatgtacgatggcatcatggcgtatggagggccttcc
tcttctgggatgattgtgtgcttttacttcatcatcctcttcatctgtggaaactatatc
ctcctgaatgtcttcttggctatcgctgtggacaacttggcagatgcagagtctctcaac
acagacgatggagacaagaaaggggggaaaaaggaggaggtaaaagatgacaaggaggac
gaagaggagaatgaccctgcggcggaggaagaggatccagaagtcccatcggggcctcgg
ccggtcatctctgacctagtgaagaaggagaagatcacccctatcccagaaggaagcgcc
ttcttcatcttcagccgcacaaacccgtttcgtgtgttttgccacaaactcatcaaccac
cacatattcaccaacctcatcctggtgttcatcatgctcagctccgtctcacttgccgcc
gaggatccgatccgtaacttctcagctcgcaatattatacttggttactttgactatgct
ttcacggctatctttactgttgagatcgtattgaagatgacaacatatggagcctttctc
cataaaggggcattctgtaggaattacttcaacctcctggacctgttggtggtgggagtt
tcccttgtttcctttggcattcagtcctcggccatctctgtggtgaagattcttagggtc
cttcgtgttcttcgacccctgagggccatcaaccgggccaaaggcctgaagcatgtggtg
cagtgtgtgtttgtggccatcagaactatcggtaacatcatgatcgtcaccactctgctc
cagttcatgttcgcctgcataggggtgcagctgtttaagggaaagttctatcgctgcaca
gatgaagccaagtccagttcagaagagtgcaagggcacttacatcctgtataaggatgga
gatgtgaaccagccaaccatccacaggcgaatgtggcacaacagtgaattcaactttgac
aatgtcctcatggctatgatggctctgttcaccgtgtccacttttgaaggctggccttct
ttgctgtacaaggcaatcgactcaaacagggagaacctgggccccatttacaactaccgc
gtggagatttccatcttcttcatcatctacatcatcatcatcgctttcttcatgatgaac
atctttgtaggttttgtgatcgtcacatttcaggaacaaggagagaaagagtacaaaaac
tgtgaactcgacaagaaccagcgtcagtgtgtggagtacgctctgaaggcgcgtccactg
aggaggtacatccctaaaaacccgtaccagtacaagttctggtatgtggtgaactccact
gggtttgagtacatcatgtttgtgctcattatgctcaacacgctctgcctggctgtgcag
cactacggacagtcagcgctctttaactacgtcatggacattctcaatatggtcttcacg
gctgtcttcactgtggaaatggttctcaaactcatcgctttcaaacccaggcactatttc
gctgatgcttggaacacatttgatgccttaattgttgtcggtagcgtcgtcgatattgct
atcactgaagttaatccaacggagacgcctcaggtggatgagcaggggaacacggaggac
agtgctcgcatctccatcaccttctttcgtctgtttcgagtcatgcggctggtcaagctc
ctcagcagaggggagggcattcgcaccctgctttggactttcatcaaatcatttcaggct
ctgccatatgttgctcttctgatagccatgctgttcttcatctatgccgtcattggcatg
caggtgttcggaaaggttgccatggtggatggcacacacatcaacagaaacaacaacttc
cagaccttccctcaggctgtgctccttctcttcaggtgtgccactggagaggcctggcag
gagattatgttggcctgtatatcagggaaactgtgtgacccagagtctgactacaacccc
ggggaggagatgacgtgtggcagtggatttgcaataatttacttcattaccttctacatg
ctctgcgccttcttgattatcaatttgtttgtggcagtcatcatggacaactttgattat
ttaacacgtgattggtccattcttggtccacaccaccttgatgaattcaagagaatttgg
tcagaatacgacccagaggctaagggcagaattaaacatctggatgttgttacacttctt
cgtcgtatccagcctcctctcggcttcggcaaactgtgccctcacagagtggcttgcaag
aggttggtagccatgaacatgcccctgaacagtgacggcactgtcatgtttaacgccact
ttgtttgcactggtgcgcactgccctgaagatcaaaacagaaggtaatctagagcaggcc
aacgaagagctgcgagctgtcatcaagaaaatctggaagagaaccagcatgaagctgctg
gaccaagtggtgccccctgctggtgatgatgaggtaaccgtggggaagttctatgccacc
ttcctgatacaggactactttaggaaattcaagaaacgtaaagaggaaggcctggtgggt
gctcacccgatgcagaacaacacagctatcgctttacaggctggccttcgcacgctgcat
gatattgggcccgaaattcgccgagcgatatcatgtgatctgcaagatgacgagctagta
gactttattccagaggaagacgaggaaatttataggcgtaatggtgggctctttggtaac
catctcatgaacggtggtcatcggcgatccaacggccaccagacaaacgcaacacagcga
cctctgcaggtgcagcctccacctcactacgcccacatggagcagccggtgggacgcctg
tctcgagctaacgcaatgtctcaccccaaccaccatcaccaccatcaccatcatcaccac
cgccaccacaactcctacggaaagtctcccaaatccaccaacatcaacctcaacaacgcc
aacgtgtccagtctgcccaacggagggcaccatcgttactatgaacatgcacctcccaat
ggatacccaggtcttcgcaatgcctactacgactatgacaagccacggacaccccagggc
caaagaaggcgctactatgagacctatgttaggtctcacggagtagatggacaccacccc
accatccgcagggaggaggagtttgatgaagaccgcctttctggggagtattacagcggg
gaggagttctatgaagacgacagtatgctgtcaggagacaggtatcagaacagtgacacg
gagtacgagactcccaaaggttaccatcaccctgacagtaactatgacgatgacgagcag
cctctctaccgcgactcacggcggtcaccaaagagacgaatgcttcctgccacgcctcaa
ggtcacagaaggccatccttcaactttgagtgtctgcgcagacaaagtagccaggacgag
cttccacatcagcgtactgctctaccactgcaccttatgcagcaccaggttatggctgta
gcaggcctggactccagcagagcccaccgcctctccccaacccgctccacccgctcctgg
gccactcctcctgccacaccggccagtaaagaccagtcaccgtattacacccctctcatc
cgtgtggaccacccacacagagacagtgctgctagcagccaagtatctgtgcgcaagagc
tcctggtacacagatgaccaagagttctcccagaggatgtactcacctgtcaacctgcag
gtgccacctgaataccacaaccagtaccaccagaagagaggcagcgccaccagccttgtg
gaagcggttttgatatcagaagggcttgggagatatgccaaggatcccaagtttgtcgct
gccacaaagcacgagatagcagatgcatgtgagatgacaatagatgagatggagagtgcc
gccagccacctgctgaacggagggatcgccccgagcgccaatggggtcaacgtgttcccc
ctgctgactccaagggactatgaactgcaggacactgcagccagctacagcgacgaggag
ccagagacagaaccgagagctccttatgaggaggacctggcagacgagatgatctgcatc
acgactttatag
DBGET
integrated database retrieval system
