Cyclopterus lumpus (lumpfish): 117730510
Help
Entry
117730510 CDS
T09199
Symbol
ca16b
Name
(RefSeq) receptor-type tyrosine-protein phosphatase gamma
KO
K16667
receptor-type tyrosine-protein phosphatase gamma [EC:
3.1.3.48
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117730510 (ca16b)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117730510 (ca16b)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117730510 (ca16b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
Pur_ac_phosph_N
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
117730510
NCBI-ProteinID:
XP_034388138
Ensembl:
ENSCLMG00005017865
LinkDB
All DBs
Position
5:complement(15672509..15764310)
Genome browser
AA seq
1407 aa
AA seq
DB search
MRRIREPSYWWILSLMFLTLPKHKDCHPVASGGQPHHPEDRHHGTSGVMRERRAAGDPYW
SYSGSHGPQSWPASYPECAARNQSPVDIAEERASVSEEYQELVLDKFNAETSNQTTMKNT
GKTVAVLLKDDYFVRGAGLPGRFKAEKMEFHWGHSNGSAGSEHSINGRRFPVEMQIYLYN
SDDFDSLSAAIKERRIIAAMVVFFELGQKDNPAVEPIIQGLKGVVHHEKETNLRSFILRD
LLPSSLDSYYRYTGSLTTPPCIKVVEWIIFSRPVYLSHSQLEAFYSIFTTEQQDHVKSVE
YLRNNFRPLQDLDNRKVFKSAVKDAWQKDLTEVLGGPHSTEASRVCSSAPVSMKIKPLNQ
TALMVSWERPKAVYHPPITSYMVSYSWVKRDVADEKTFTKTGDQSMKAVITNVSPDLLYL
FRVQAVCPHDLRSDFSQTLLFRANTTRIFEGSRIVKTGMPTISPASSADMAPISSGSSTW
TSSGIHFSIVSMATGMGPSSSGSQATVASVVTSTLLAGLGVGGGVISSLPSSVWPTKAPQ
ATQNPTRPSIPPAKSSTEQAASQGSETDSPSEEKQAAHEDEEEEKEGEREGEQEEGEDEK
KRKNKTAPDNEEKQANSTVVKEPLIPTPASTAKEKGEGKPTVEGTTVPTSTGDDQLLNAE
RNSTDVNAFSTAEPRNATAEMQIPQSSTLSPKISNDGKSSWPFFVHTDSTILSNTTRTPH
PGIGRMVWIVPLVVVSALTLLCLIMLLTVMVYWRRFFQTAHFYVEESSSPRVVANENIPI
IPIPDDMDAIPVKQFIKHIMELYKNNLQGFSEDFEEVQRSIADLKITAEHSNHPDNKHKN
RYINIVAYDHSRVKLRALAGKDAKHSDYINANYVDGYNRPRAYIAAQGPLKSTFEDFWRM
VWEQNTGIIVMITNLVEKGRRKCDQYWPTENTEQYGNIVVTPKCTKVHACYTLRRFLIRN
TKVKKGQKGNPKGKLNERIVVQYHYTQWPDMGVPEYTLPVLTFINRSSAARAADMGPVLV
HCSAGVGRTGTYIVIDSMLQQIKDKSTVSVLDFLKHIRTQRNYLVQTEEQYVFIHDALME
AIMSRETEVPAWQLHSYVNSILTPNSTGRTLLEKQFRLLTQCNARFVECFSAHKDCNKEK
NRNSSVVPSERARVGLTTLPGMKGTDYINASYVMGYFRSNEFIVTQHPLPHTTTDFWRMI
WDHNAQIIVMLADNQGLAEDEFVYWPSREEAMNCIAFTVTLISKDRLCLSNEEQIIIHDF
ILEATQDDYVLEVRHFQCPKWPNPDAPLSSTFELISVIKEEAMTRDGPTIVHDEYGAVSA
GMLCALTTLSQQLENEGVVDIYQVAKMINLMRPGVFTDIEQYQYLYKAMLSLVSNREFCL
SPMHMDTNGVVVVADESDPAESMESLV
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaatacgggaaccgagttactggtggattttatccttaatgtttttaaccttg
cccaaacacaaagactgtcatcctgttgcatcaggtggccaacctcaccaccccgaagac
aggcaccatgggacttcaggcgtaatgagggagaggagggcagctggtgacccctattgg
tcctattcaggaagccatggacctcaaagctggcctgcctcatacccagaatgtgctgcg
aggaaccaatcacctgtggacattgcagaggaacgagcttcggtttcggaggagtaccag
gagctggtgcttgacaagttcaacgctgagacctccaaccagaccaccatgaaaaacacg
ggaaagacagttgctgttctcctgaaggatgactactttgtaagaggtgctggacttcca
gggcgttttaaggctgagaagatggagtttcactggggccatagcaatggatcagcaggc
tcagaacacagcataaatggcagaaggtttcctgtcgagatgcagatctacctttacaat
tcagatgactttgacagcctcagtgctgccatcaaggaaagacgcatcattgctgccatg
gtcgtcttctttgagcttgggcaaaaagacaatccagctgtagagcccatcatccaggga
ttgaaaggagtagtgcatcatgaaaaagagaccaacctcaggtcgttcatcctgagggat
ctgctgccatcgtcactagacagttattaccgatacactggctctctgaccacaccgccc
tgcatcaaggtagtggagtggatcatcttctccaggcctgtgtatctgtcccactcacag
ctggaggctttttactccatctttacaacagagcaacaggaccacgtcaagtctgtcgag
tacctcaggaacaacttccggcccctgcaggacttggacaataggaaagtctttaagtcg
gctgtaaaagatgcatggcagaaagatttaactgaagtcctgggaggccctcacagcact
gaagcttcaagagtgtgcagcagtgccccagtgagcatgaagatcaagccgctgaaccag
acagcattgatggtgagctgggagcgccctaaggctgtttaccacccgcccatcaccagc
tacatggtctcctacagctgggtgaaacgtgatgttgctgacgaaaagaccttcaccaag
actggggaccagagcatgaaagccgtcattacgaatgtgtcccctgatctcctgtacctg
ttcagagtgcaggcagtgtgtccgcatgacctgcgcagtgacttcagtcaaactctgctc
ttcagagctaatacaacaagaatatttgaagggtctcgtattgtgaagactgggatgcct
acaatttctccagcgtcctcagcagacatggctcccatcagctctggttcctctacttgg
acatcctctggcatccacttctctattgtctctatggcaacgggaatgggcccctcctct
agtggcagccaggccacagtggcatcagtggtgacgagcaccttgctggcaggcttgggc
gtgggcggaggagtcatctcttctttgcccagctctgtttggcccacaaaagctccccaa
gccacgcagaatcccacccgtccatccatcccgcctgcaaagtccagcaccgagcaggca
gcgtcccagggctctgagacagatagtccgtctgaggagaagcaggctgcacatgaggat
gaggaggaggagaaggagggggagcgagaaggagagcaggaggagggagaggatgagaag
aagagaaagaacaagactgcacctgataatgaggaaaagcaagccaacagcactgtggtc
aaagagcctttaatccccacccccgcgtccacagccaaagagaaaggagaagggaagcct
acagtcgaaggcaccacggtacccacaagcactggtgatgatcagttgctcaacgcagag
aggaattccacagatgtaaatgcgttctccactgcggagcctcgtaatgccacggccgag
atgcagattccccagagctccacactgtctccaaagatcagtaatgatggcaagagttcc
tggcctttctttgtccacactgacagcaccattttgtccaacacgacccgaacccctcac
ccggggataggcaggatggtgtggatcgtccccttggttgtggtgtctgctctcactctg
ctctgcctcataatgctgctgactgtgatggtctactggaggaggtttttccagacagct
cacttctatgtggaggaaagcagctctccacgggtggtggccaatgagaatatacccatc
atccctataccagacgacatggacgccatccccgttaagcagtttattaaacacatcatg
gagctctacaagaacaacctgcaagggttttctgaggatttcgaggaggtccaacgctcc
atagcagacctgaaaatcactgcagaacactcgaatcatcccgacaacaagcacaaaaac
cgatacatcaacattgtggcctatgaccacagcagggtgaaattacgagctctggcgggg
aaagatgccaaacattcggattatatcaatgccaactacgtcgatggctacaaccggccc
agagcttatatagctgctcagggacctctcaagtctacatttgaggacttttggaggatg
gtgtgggagcagaacacaggaatcatcgtcatgatcacaaacctggtggagaaagggaga
aggaaatgtgaccagtattggccaacagagaacaccgagcagtatggaaacattgtggtg
acgccgaaatgcaccaaagtacacgcctgctacacactgcggcgtttccttataaggaac
actaaagttaaaaagggtcagaaggggaacccaaaagggaagctaaatgagcgcatcgtt
gtccagtaccactacacgcagtggcctgacatgggagtaccagagtacaccctccccgtc
ctcacctttatcaaccgctcatcagcggctcgcgctgcagacatgggccctgtcctggtg
cactgcagtgcaggggttgggcgcacaggaacatacattgtcattgacagcatgctacaa
cagatcaaggacaaaagcacagtcagcgtcctggattttctcaaacatatccgcacacaa
cgcaactacctagttcagactgaggaacagtatgtgttcatccacgatgctctgatggag
gccatcatgagtagagagacagaggtgcccgcttggcagctgcatagttatgtcaacagc
atcctcacgcccaactcgacaggccgcacactgctggagaagcagttcaggctgttgact
cagtgcaacgcacgctttgtggagtgctttagtgcccacaaagactgcaacaaggagaag
aaccgcaattcctcagtggttccctcggagcgagcaagggtcggactcaccactctgcct
ggaatgaaaggaacagattacattaatgcgtcctacgtaatgggttacttcaggagtaat
gagttcatcgttacccagcatcctttgccccacaccaccacagacttctggaggatgatt
tgggaccataacgctcaaataattgtcatgttggctgacaaccagggcctggctgaggat
gaatttgtctattggccgagtcgggaggaggccatgaactgcatcgcctttactgtcaca
cttatcagtaaggacagactgtgcctctccaacgaggagcagatcatcatccacgacttt
atcctagaggccacacaggacgactacgttttggaggtgagacattttcagtgccctaaa
tggcccaaccctgatgctcctctaagcagcacctttgagctcatcagtgtcatcaaggag
gaggccatgactcgagatggccccaccattgtgcatgatgagtatggagccgtgtcagca
ggcatgctctgtgccctcaccacgctgtcccagcagctggagaacgaaggcgttgtcgac
atctatcaggtggctaagatgatcaatctcatgaggccgggagtcttcactgatattgaa
cagtaccagtacctttacaaagccatgctcagcctggtcagtaacagagagttttgcctg
agccccatgcacatggacactaacggggtcgtggtggttgcagacgagtcggaccccgct
gagagcatggagtcgctcgtctga
DBGET
integrated database retrieval system
