Cyclopterus lumpus (lumpfish): 117730529
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Entry
117730529 CDS
T09199
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
clum03029
]
117730529 (trub2)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117730529 (trub2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
TruB_C_2
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
117730529
NCBI-ProteinID:
XP_034388166
Ensembl:
ENSCLMG00005014524
UniProt:
A0A8C2ZNG3
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Position
5:15464983..15468593
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AA seq
319 aa
AA seq
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MATPAIRMFRRLEGLFCVYKPSGVHWKLVRDSIEINLLKGLNATPLQPLPQGVRFLAHRG
SETEAPKGLTLSAASVPVLSKHPLVTGPEFQNIRVGVGHRLDAFSSGVLVLAVGNGNKAL
NDLYRTRVTREYTLEGEFGTATDDFSHKGRVIERSTYGHITQDKLDRVLAMLEGVNQKAL
LMYSNVDMRSQEAYEMAVHGLLGPDGKSQPILTGLRCVHFQPPNFTLEVQCLNETQKYLR
KFVHEIGLELRSTAACKGVRRTRDGPFTLQNALIHHQWTASDVVQAIGQYHSKKKDPHTQ
IKNPAFQPTEGSTTTTKQQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccagctattcggatgtttcggaggttagagggtcttttttgtgtgtacaag
ccctctggtgtccactggaaactcgttcgggatagcattgagataaatcttcttaaaggt
ttaaatgctacaccgctccagccacttcctcagggggtgcgcttcttggcgcacagaggc
agtgagactgaagcacccaagggactcacactgtctgcagcctctgtgccagtactgtcc
aagcatcctctggtgactggacctgaattccagaatattcgagttggagtaggacatcgc
ctggatgcattctcttctggtgttctggttcttgctgtcgggaatggaaacaaggctctg
aatgatctctacagaacacgagtcacaagggaatacactttggagggtgaatttgggact
gcaacagatgatttctctcacaaaggcagagttattgaaagatccacttatggtcacatc
acacaggataagctggacagagtgttagcgatgctggagggagtcaatcaaaaggccttg
ttaatgtattccaatgtcgacatgcgctcacaggaagcctatgagatggctgtgcacggt
ttactgggtccagacgggaaatcacagcctattctgacaggcttgcgttgcgttcacttc
cagccccccaacttcactttagaggtgcagtgtttaaatgaaactcagaaatatttgcgc
aaatttgtgcatgagataggactcgaactgcgcagcacagcagcgtgtaaaggagttaga
cggacccgagacggacccttcaccctgcagaatgctctgatccatcaccagtggactgct
tctgatgttgtacaggccatcggacaataccactctaaaaaaaaagatcctcacacacag
atcaagaacccagcttttcaaccaacagaaggcagtacgacgaccacaaagcagcagtag
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