KEGG   Cyclopterus lumpus (lumpfish): 117730548
Entry
117730548         CDS       T09199                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2 isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117730548 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117730548 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117730548 (ell2)
Protein phosphatases and associated proteins [BR:clum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117730548 (ell2)
Transcription machinery [BR:clum03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117730548 (ell2)
    Little elongation complex (LEC)
     117730548 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 117730548
NCBI-ProteinID: XP_034388195
Ensembl: ENSCLMG00005016419
LinkDB
Position
5:1719286..1731670
AA seq 695 aa
MLQPQRDDGGGLVKMAALSEDGRYGLNCGRQSTDRVTVLHVKLTETALRAIDSHQNCMNV
PPLQPTIQFKGLQGRIKIPKTDSSSDTFHNFDFYLSNVGKDNPQGSFDCIQQYVSSSGAS
HLALLGTVQDKVTVCATNDSYQVTRERMTQAAEDTRERGTKVIKPGGQYRGKQVHIRKPA
LSGQDVVPERKRSTPINPANTIRKCLSNNPVSQRPFRDRLIHLLALRPYKKLEVLARLQR
DGINQKDRISMGTTLQQVANLNPKDNTYSLKDFIYRDIQRDWPGYSDDEKTQVDRILARK
LGLPIETLPSSSSPKDGVPTSPQKRQADFDFIDPLAPKKARISHLSNRGPATSSSSERRE
EEGSPSSKRSSLPANVTSGPPPHLPIPSHPPAPSHQQPSPASNSNSPSTPEGCGTQDLPI
DQSSSCRDPSPIPFSSDRTLQDHYRHPVPVPTPTTSPSPPPPLPPPPPPLIIPPPRTSLT
VTSTVITSPPLSSSTSKKFKKKSKKHKDKDREREKGKRTEKSSRSPPVVAEQAEDTRRAK
KKRSAEEETREVINKNPQKDPGPSDKEKPVQATEFSPTIEMPDYVVKYMPMVSVDQRQSY
KDDFNAEYDEYRQLHARVENITRRFTELDAKCRKLPPGTKEYQKVQEEVVKEYKKMKQHS
PNYHEEKQRCEYLHNKLAHIKRLIADFDQRRVPWC
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgctccagcctcaaagggacgatggtggagggctggtaaagatggcggcgctctccgag
gatgggaggtatggattaaattgtggccgacagagcacagatagagtcaccgtattacac
gtcaaattgaccgagacggcgctgagagccatagacagccaccaaaattgtatgaatgta
ccacctttgcagccaacaatacaattcaagggactccaagggcgcattaaaattcccaaa
acagattcctcctcggacaccttccacaatttcgatttttacctgtctaatgtgggcaag
gacaaccctcagggaagctttgactgcatccagcagtatgtgtccagctcaggggcctca
cacctggcattgttggggacagtacaggacaaggtcacagtgtgcgccacgaatgactcc
taccaggtgacccgggaacgcatgacccaggctgcagaggacacgcgtgaacgtgggacc
aaagtcatcaagcccggcggccagtacagaggaaagcaagtccatatccgtaagccggcg
ctgtcgggccaagacgtggtgccggagcgcaagcgctccacccccatcaacccagccaac
actattcgcaagtgcctttccaataaccccgtgtcccagcggcccttcagggaccgcctc
atccacctgctggcgctcaggccctacaagaagctggaggtgctggcccgtctgcagcgg
gacggcatcaaccagaaggaccggatctcaatggggaccaccctgcaacaggtggcgaac
cttaaccccaaagacaacacgtactcattgaaggactttatttatcgtgacatccagcgg
gactggcccggctactctgacgatgagaagacgcaggtggaccggatcctggctcgtaaa
ttaggtcttcctattgagaccctcccatcaagcagttctcccaaagacggtgtccccaca
tcgccccagaagcgccaggcagactttgactttattgatcctctggctcccaagaaagcc
cgcatctcccacctcagcaatcgggggccggccacatcttcatcctccgagcgccgcgag
gaagagggcagccccagctctaaacgctcgtccctaccggccaacgtcacctcgggccct
cctccccatctcccgatcccgtcccaccctcccgcgccctctcaccagcagcccagcccg
gcctccaactccaactcacccagcaccccggagggctgtggcacccaggacctgcctata
gaccagagctcctcctgcagagacccttcacccatcccgttctcctctgataggaccctg
caggaccactatcggcaccctgtccccgtccccacaccaaccacctcccctagcccccct
cctcctcttcctcctcctcctcctcctcttattattccccctcctcgcacctcgctcaca
gtgacctccactgtcatcaccagccctcccttgtccagcagtaccagcaagaagttcaaa
aagaaatccaagaagcacaaagataaggaccgcgagagggagaaagggaaacggaccgag
aagagtagcagaagtcctcccgtcgtagccgagcaggccgaagacacccggagagccaaa
aagaagcgcagcgcagaagaagagacccgagaagttatcaacaagaaccctcaaaaggat
ccaggcccttcagataaagagaaaccagtccaagccactgagttctcccccacaatcgag
atgcccgactacgtcgtgaagtacatgcccatggtgtccgtggaccagaggcagagctac
aaggacgacttcaacgcggagtacgatgagtaccgccagctacacgcccgggtggagaac
atcacccgccgcttcaccgagctggacgccaagtgccggaagctgccacccggcaccaaa
gaataccagaaggtgcaagaagaagtcgtgaaagagtacaagaagatgaaacaacacagc
cccaactaccacgaggagaagcagcgctgcgagtacctgcacaacaagctggcccacatc
aagcggctgatagccgactttgaccagcgcagggtgccgtggtgctga

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