Cyclopterus lumpus (lumpfish): 117730557
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Entry
117730557 CDS
T09199
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_5
Motif
Other DBs
NCBI-GeneID:
117730557
NCBI-ProteinID:
XP_034388219
Ensembl:
ENSCLMG00005000523
UniProt:
A0A8C2W8K1
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Position
1:complement(9139321..9152830)
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKESRALAGLVKDGGKETKTKGKDPKEGKKDTSSS
TPGVAFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITAVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKELQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPTQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaggagtccagggctctagccggcttagtcaaggatggtggc
aaagaaacaaagaccaaagggaaagatcccaaagaaggaaagaaggacaccagcagctca
acgccgggtgtggctttctctgttgacaacacgataaagcggccaaacccggcagcaggt
acacgtaagaagtccagcaatgccgaggtgatcaaagagctcaacaagtgtcgggaggag
aactcaatgagactggacctatctaaacggtccattcacatcttgcccacctccattaag
gagttgacacagctggctgaactctacttatacagcaacaagctgcagagcctgccagct
gaggtgggttgcctatcaggcctggtcactttggccctaagcgagaactccctgaccagt
ttgcctgactccctggactctcttaagaaacttcgaatgctcgaccttcggcacaacaag
ctgagagagataccagctgttgtctaccggctgacatctcttacaacgctgtacctgcgc
ttcaaccgcatcacagcagtggagaaggacatccgaaacctatccaagctcactatgctc
agcattcgtgagaacaagattaaacagctgcccgcggagataggggagctatgcaacctc
ataactctggatgttgcccataaccagttggaacacctaccgaaggagattgggaattgc
acacagataaccaacctcgacttgcagcacaatgagctcttggacctccccgagactata
ggcaacctggcaagcataaatcgcttaggtctgcgatacaatagattgtcagccatcccc
agatcattagccaaatgtcgagaactggaggagctaaaccttgaaaacaacaacatttcg
gttttgccagagggcctactgtcaagtttggtcaacctgactagtctaacactggcgagg
aactgctttcagtcgtaccctgtgggtggaccatcccagttctccaccatctattccctc
aacatggagcacaaccgcatcaacaagatcccctttggcatcttctccagggccaaagtc
ttaagcaagcttaacatgaaggacaaccaattaacatctctgccattggactttggcaca
tggactagcatggttgagcttaacctggcaaccaatcagctgacaaagatcccagaggac
gtctgtggcttagtttctctggaggtgttaatactgtccaataatcttctcaagaagtta
ccacatggtattggaaatttgagaaagctacgggagctcgacttggaggaaaacaaattg
gaatctctacctaatgaaattgcttatctgaaagagttacagaaattggtgttgacaaat
aatcagctgaccacgttacccagaggcatcggccacctcaccaacctgactcatcttggt
ttgggggagaacctgctgcaacacctcccagaggagattggtacactggagaacctggag
gaactgtacctcaacgacaatcccaacctgcacagcctaccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccaacccagatt
gtcgcgggaggcccctccttcatcatccaattcctcaagatgcaaggaccataccgtgcc
atggtctga
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