Cyclopterus lumpus (lumpfish): 117730559
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Entry
117730559 CDS
T09199
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04110
Cell cycle
clum04218
Cellular senescence
clum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117730559 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117730559 (rbl1)
04218 Cellular senescence
117730559 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117730559 (rbl1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117730559 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
117730559
NCBI-ProteinID:
XP_034388223
Ensembl:
ENSCLMG00005018994
UniProt:
A0A8C3AE58
LinkDB
All DBs
Position
5:26137213..26158287
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AA seq
1061 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRSSLDALCQELNMDAHTAAETMDSFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRTAKLSLIQFFSKMRKWADMSNLPQDF
RLRMERLERNFEVSTVIFRKFEPIFMDMFQNPQGGGRPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCNNRKDLINPTFKGLPALYRAD
GLVSSDEPPPCVLERLCELHDGLVVEAKGIKQHYFRPYIQKLFHRQILKGNEDHLTELLD
PQSFIDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKIVQEPSANQMTAQSQL
QQHVEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVAGLRTAPSEQLVQV
FRSCSRNPSESILGRVKTLGQTFKEHYTNDSEDMPGSHIDFAENRLKLAEILYYKILENV
LVQENKRLHGKDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLTPFYFFK
VIEVFIRSEEGLSRDMVKHLNLIEEQVLESRAWSADSALWSALQAAGSKVPTVEEVNFPS
SLDTGSGFSGGVQSHLPLVSLSPIIHPRIREFRSGLGSARKDVPPSPLSLHDRYSSPAAG
SAKRRLFGDDPPARISGVIPGSPMTSPAKRLMFGSGSTLRIGAPGGQTTVLSIPLQGANN
DRTITLIPVQPCDSSGTITAQFLLTTSPSRAAAPATSDPQAGSARPRRTGSLALFFRKVY
HLASVRLRDLCVKMDVPSELRGKIWTCFEHSLVHSTGLMRDRHLDQLLLCSVYIISKITK
ETHSFHDIMKCYRSQPQASSHVYRSVLLRHREQVTDENMEVDPVSGGESAEKTNQVPGRA
DCDQSGEEERGDLIQFYNSVFVLKMKSFALRYATQDQLADAPPLSPFPAVRAQPLSPRRV
SQRHSLYVSPHKNSAGGLTPTPFTYRINSSPSKELSDINRMIRQGSASRKRAFTMEGDVM
MSSACDSPSKRACPESGGGGGSSADVLLKRLQDVVSERQSH
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaggagtcgtccgattccgagtccggcaggatggaggagagctcggtccgc
agcagcctggacgcgctgtgtcaggagctcaacatggacgcgcacacggccgcggagacc
atggactccttcacggccatctggaacacctacaccctcgagggagaggtggtccactgg
ttggcctgttccctgtatgcagcctgcaggaagggctccacccccacggtggggaaaggc
ctgatggaggggaactgtgtctcgctcaccaggatccttcggacggccaaactcagtctg
atccagttcttctccaagatgaggaagtgggccgacatgtcgaacctccctcaggacttc
cggctccgcatggagcggctggagcgcaactttgaggtttccacggtgatcttcaggaag
tttgagcccatctttatggacatgttccagaacccccaggggggggggaggccccggcag
ccacgcagcaggaagcacaggcgtctgccgtgtcacatcagcgatgtgttcaagttctgc
tggactctgttcgtctacaccaaaggtaacttccggatgatcggtgacgacctggtgaac
tcgtaccacctgctgctctgctgtctggacctggtgttcggcaacgcgttgctctgcaac
aacaggaaggacctcatcaaccccaccttcaaaggtctgccggctctgtaccgcgctgac
ggcctcgtgtcctcagacgaacctcctccgtgtgtgttggagcgtctgtgtgagctgcac
gacggcctggtggtcgaggccaaaggcatcaagcagcactacttcagaccgtacatccag
aagctgttccacagacagatcctgaaaggcaacgaggatcatctgactgaactgttggat
cctcagagcttcattgataacaacaaagccataaacagggagtacgaggagtacgtgttg
acggtcggagacttcgatgagcgagtgtttctgggagccgacgcagacgaggaaatcggg
actccgaggaaaatcgttcaggagccgtcggccaatcagatgacggctcagagccagctg
caacaacacgtagagaagtcgggctcgctcgccccctccacccctctgacggggcgggtc
tacctgaaggagaaggacctgctcgtcactcccgtctcctcggcgacgcagagcgtcagc
cggctgcagagcatggtggccgggctgaggacggcgcccagcgagcagctggtgcaggtc
ttcaggtcgtgctccagaaacccctcagagtccattctgggccgagtgaagaccctggga
cagaccttcaaagagcactacaccaacgactcagaggacatgcccggctcccatatcgac
tttgcagagaaccgcctgaagctggctgagatcctctactacaagatcctggagaacgtc
ctggtccaggagaacaagcggctgcacggcaaagacatgagcgtgttgttggagcaggac
atcttccactgttccctgatggcgtgttgtctggaggtggtgttgttctcctacagctcc
cagagaaccttcccctggatcatcaacatcttcaagctgaccccattctacttcttcaag
gtgatcgaggtgttcatccgctccgaggagggcctgtccagagacatggtgaagcacctg
aacctgatcgaggagcaggtcctggagagcagagcctggagcgccgactctgccctgtgg
agcgccttgcaggctgccggcagcaaggtgcccactgttgaggaggtgaacttcccctcc
agtctggacacgggttctggttttagcggcggggttcagtctcacctgccgctggtctcc
ctctcccccatcatccacccccgcatccgggagttcagatctggactgggcagcgctcgc
aaagacgttcctccgtctccgttgtcgctccacgaccgctacagctcgccggcagccggc
agcgccaaacgccgtttgttcggcgacgatccgccggcccgaatctcgggcgtgatcccc
ggcagcccgatgacgtcgccggccaaaaggttgatgttcggctccggcagcaccctgagg
atcggagctccgggaggccagaccaccgtcctcagcatcccgctgcaaggtgcaaataac
gaccgcaccatcacgctgatcccagttcagccgtgcgactcctccggtacgatcaccgct
cagttcctgctcactacctccccgagccgcgccgccgcccccgcgacctctgacccccag
gcaggaagcgcccggccgcgacgcaccggatccctcgctctgttcttcaggaaggtgtac
cacctggccagcgtgcgtctcagggatctgtgcgtgaagatggacgtcccgtcggagctc
cgagggaaaatctggacgtgtttcgagcactcgctggtccacagtaccggtctgatgagg
gaccggcacctggaccagctgctgctgtgcagcgtgtacatcatatccaaaatcacaaaa
gagactcacagcttccatgacatcatgaagtgttaccgcagccaaccacaggccagcagt
catgtgtaccgcagtgtgttgctgcgtcacagggagcaggtgacggatgagaacatggag
gtggatccggtgtcaggtggagaatctgcagagaaaaccaatcaggtcccgggacgagcc
gactgcgaccaatcgggcgaggaggagcgcggcgacctcatccagttctacaacagcgtc
ttcgtcctgaagatgaagagcttcgcgctgcgttacgcaacccaggaccagctggcggac
gccccccccctctctccgttcccggcggtccgggctcagcccctgtcgccccgtcgggtc
tctcagagacactcgctgtacgtctcccctcacaagaactcagccggcggcctcacgccg
acccccttcacctacaggatcaacagcagcccctctaaggagttgtccgacatcaaccgg
atgatccgacagggcagcgcgagcaggaagcgagccttcaccatggagggcgacgtgatg
atgtcatcagcctgcgactcccccagcaagagggcgtgtccagagagcggcggcggcggc
ggcagcagcgccgacgtgctgctgaagcggctgcaggacgtcgtgtcggagcggcagagt
cactga
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