Cyclopterus lumpus (lumpfish): 117730582
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Entry
117730582 CDS
T09199
Name
(RefSeq) interferon-induced GTP-binding protein Mx-like
KO
K14754
interferon-induced GTP-binding protein Mx
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117730582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_21
AAA_29
ABC_tran
AAA_16
AAA_15
Motif
Other DBs
NCBI-GeneID:
117730582
NCBI-ProteinID:
XP_034388263
Ensembl:
ENSCLMG00005003609
LinkDB
All DBs
Position
5:complement(5461008..5466022)
Genome browser
AA seq
663 aa
AA seq
DB search
MNTLNQQYEEKVRPCIDLIDSLRSLGVEKDLALPAIAVIGDQSSGKSSVLEALSGVALPR
GSGIVTRCPLELKMKRRREGEKWYGKISYQDHEEEIEDPADVDRMIREAQNKMAGVGEGI
SNDLISLEIASPNVPDLTLIDLPGITRVAVKGQPENIGEQIKALIQEIITKQETISLVVV
PSNVDIATTEALKMAQEVDPDGDRTLGVLTKPDLVDKGTEESVVEIVRNLVIHLKKGYMI
VRCRGQKEITERVSLTEATRREKAFFNDHVHFKILYKENHATVPKLAEKLTLELVLHIKR
SLPRLEDQIEKKLRETQAKLDSCGSGPPADAGERLGFLIDTVAAFTKDAIGLTTGEEIKF
GDRLNIFAILREQFAAWKNIIEHFGIVFNQNIEREVTQYERRYRGRELPGFINYKTFEDM
VKEQIKQLEGPAVLKLKEVADIVTKELFKLAQSSLVGFPNLIKTAQIKIEAIRKEKEIAA
ESMLRTQFKMELLVYTQDSTYSKKLGKRKREDEQFLASHPLKTVTWSNDSGATLREMIKH
LKSYYKIAGQRLADQVPLVIRYQVLQESVIQLQREMLQMFQDKKITEYLLQEDPAIKPER
IHHQNRLKRLSMARNLLTEFSMNTYNFNQVHRLDPNIGKDTAAHSLPPPHSPVCKTAKNK
RAV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctgaaccaacagtacgaggagaaggtgcgtccctgcatcgacctcattgac
tctcttcgctctctgggggtagagaaggacttggcgctgcctgctatcgccgtgatagga
gaccaaagctcggggaagagctccgtgttggaggcgctgtcaggcgtggctctgccaaga
ggcagtggcattgtgacaagatgtcctctcgaactgaagatgaagagaaggagagaagga
gagaagtggtacgggaagataagctaccaggaccatgaagaagagatagaagaccctgcc
gatgtggataggatgattagagaagctcagaataaaatggccggggtcggggaggggatc
agtaatgacctcatcagtctagagatcgcctctcctaatgttccagacctgacgctcatt
gacctgcccggcatcaccagggtggctgtaaagggacaaccggagaacattggagagcag
attaaggcactgatccaggagattatcacaaaacaagagaccatcagcttggtggttgtt
ccatccaacgtggacatagcaaccacagaggctctgaagatggcgcaggaggtggatcct
gatggagaccggactttgggcgtcttgaccaagcctgacctggtggacaaaggcacggaa
gagtcggtggttgaaattgtccgtaatttggtcatccacctgaagaagggctacatgatc
gtcaggtgcaggggtcagaaggagatcacagagagggtgtctcttacggaagcaacaaga
agagaaaaagccttcttcaacgatcatgtgcatttcaagattctctacaaggaaaaccat
gctactgttcctaaactggcggaaaaactcacccttgagttggtgcttcatatcaagagg
tctctgcctcgactggaagaccagatagagaagaaactaagagagactcaggcaaagctg
gacagctgtggcagtggaccgccagctgatgcaggggagagactgggtttcctcattgat
acagtggcagcctttacaaaggatgctatcggcctcaccacaggggaagaaatcaaattt
ggagacaggctcaatatctttgccatactaagagaacagtttgcggcttggaaaaatatc
atagagcactttggaatagtattcaaccagaatattgagagagaggtgactcagtatgaa
cgaaggtaccgtggaagagaactgccggggttcataaactacaagacctttgaggacatg
gtcaaggagcagatcaaacagctggaagggcctgctgtcctgaaactcaaggaagtggca
gacattgtgacaaaagagctgtttaagttggctcagagcagccttgttggatttcccaac
ctcatcaaaacagctcagatcaagattgaagccatcagaaaggagaaggagattgcagca
gagtccatgctgaggactcagtttaagatggaattgcttgtttacactcaggacagcaca
tacagcaagaagttagggaagcggaagagggaagacgagcagtttttggcttctcatcca
ttaaagacagtcacttggagcaatgacagtggggccaccctgagagagatgattaaacac
ctgaagtcctattacaaaattgctggccagcgtctggctgaccaggtcccgctggtaatc
cgctaccaggtgcttcaggagtctgtcatccagctgcagagggagatgctgcagatgttt
caagacaagaagataacagagtatctccttcaagaggaccctgccataaaacctgagaga
atccaccatcagaatcgcctcaagaggttgtcaatggcacgcaatctgttgactgagttc
agtatgaacacatacaacttcaaccaagtccataggttagatcccaacattggaaaggac
acagcagcccactccctaccccccccacacagtcctgtgtgtaaaactgcaaaaaacaag
agggctgtttaa
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