Cyclopterus lumpus (lumpfish): 117730638
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Entry
117730638 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117730638
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
117730638
NCBI-ProteinID:
XP_034388370
Ensembl:
ENSCLMG00005007870
LinkDB
All DBs
Position
5:complement(5694772..5802405)
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AA seq
1298 aa
AA seq
DB search
MSNPALKKNHWTSRVSECSVSKDARGDVNVPLRGGAENGEFAYIGQVGEGVALHIGNINE
GELLLEVENLSISGLPLYDVQTVIKNCKGPVKLKTVRQGSKLNKDLKHYLSQRFQKSSPD
HELQQTIRDNLYRHAVPCTTRTPRDGEVPGVDYNFLSVEDFLELEKSGTLLEIGTYDGNY
YGTPKPPVQPPSGKVINSSGSGGDAPLPDGLSGSLPGSQHSTPRRRKFYNDMHNAGIGPG
EQQEDDEDLPDMNSSFTGDSSEVDDIPHSVHPFAPPTRKSDPPYVGRTPSPSATTESTEQ
SHSYLSHPPPEDPLGTLPDNWEMAYTENGEVYFIDHNTKTTSWIDPRCLEKPQKPLEECE
DDEGVHTEELDNDLELPPGWEKIDDPVYGVYYVDHINRKTQYENPMLEAKRRRQLEQQPQ
QPQPQSQQPPEEWIEDSALAGAPLASYAANHQETYRDPQKGPPMPNAMGQKRGKPFFTRN
RSELNGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSV
NDTCVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSMVTSVAIIDNKDPI
IVNGQVASNSYNSPSSHGGHNVGSTNGGAPLNGLPRSYSPSAEMASDTSSQHGYHNDVVN
LASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLKEGDIIVEVN
KRNVQSMSHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLDDYERAPPYRDYTRRQLS
RKDSQNSSQHSVSSHRSTHTDSPLHPTLAPPLSESIAPPPPSQPLPGLPPQDSPADGTIQ
RKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKFG
AADEDGRLRSGDELISVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKANYAVKAEGD
VPPSPASSHHSSNQAPSLTEEMGKRTPQGSQNSLNTVSSGSGSTSXIGSGGGGGGAGGSG
NAVVASAVRPYDVEIRRGESEGFXFVIVSSVSRPEAGTLFPGNACVAMPHKXGRIIEGSP
ADRCGKLKVGDRILAVNGVSITNKSHSDIVNLIKEAGNTVTLRIIPETSSNASLLTNAEK
IATITTTHTSQQLAAPEARNNTKPKQESFEFKAPPGPPPQPPTQVSTQDSEFYSVDLDRD
NKGFGFSLRGGREYNMDLYVLRLAEEGAAVRNGKMRVGDEILEITARGTKGMKHARAIEL
IKSGGRRVHLVLKRGDGSVPEYGGSIYENIPFSPIFTP
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccccgcgctgaagaagaaccactggacctccagagtgagcgagtgctccgtc
tccaaagatgcccgcggcgacgtgaacgtgccgctgcgcggcggagcggagaacggggag
ttcgcctacatcgggcaagttggcgagggggtcgcgcttcacattgggaacataaacgaa
ggagaactactgctggaggtggagaatctttcgatttcgggattacccttgtacgacgta
cagaccgtgataaaaaactgcaaaggtcccgtcaagttgaaaactgtcaggcaaggaagc
aagctgaacaaggacctgaagcattatctgagccagcgcttccagaagtcctcgccggac
cacgaactgcagcagaccatccgagacaacctgtaccgccacgccgtgccttgtacaacc
cgcacccctcgtgacggagaagttcctggcgtggactacaacttcctctcagtggaggac
ttcctggagttggagaagagtgggaccctgttggagatcggaacgtatgacggaaactat
tatgggacgcccaagccaccggtgcagccccccagtgggaaagtaattaacagtagcggt
agcggcggtgatgccccactgcccgacgggctcagcggtagcctgccgggctcgcagcac
tccactccccgacgccgcaagttctacaatgacatgcacaatgctggaatagggcctgga
gagcagcaggaggacgacgaggacctcccggacatgaacagtagctttacaggagattct
agtgaagtagacgacattcctcactcggtgcaccccttcgccccccctacgcgcaagagt
gacccgccctacgttgggaggaccccctcgccatcggccaccacggagagcactgagcag
tcacactcttacctgagccatcctcccccggaggatcctctgggaactctgcccgacaac
tgggagatggcctacaccgagaacggagaggtctacttcatcgaccacaacacaaagacc
acctcctggatagaccctcggtgcctggaaaagcctcagaaacccctggaggaatgtgaa
gatgatgaaggggtacacacggaggagctggacaatgacctagaacttccaccaggatgg
gagaaaatagacgatccggtgtacggggtctactacgttgatcatatcaacaggaagacc
cagtatgagaatccaatgttggaggctaagaggcgcaggcagctggagcagcagcctcag
cagcctcagccccaaagccagcagccacccgaagaatggatcgaggattcggcgttggcg
ggggccccactggccagctatgctgccaaccaccaggagacctacagggaccctcagaaa
ggacctccgatgcccaacgccatggggcagaaacgagggaagcctttctttacccggaac
cgatccgagctgaacgggactttcatcaacaccaagctgaaaaagagtcgtcgggggttc
ggcttcactgttgtgggaggcgacgagccagacgagttcctgcagatcaagagcctggtc
ctggatggaccggctgccctcgatggcaaaatggagacaggtgacgtgatcgtgagcgtc
aacgacacgtgtgtgctgggctacacccatgcccaagttgtgaagatcttccagtccatc
ccaatcggctccatggtcaacttggagctgtgccgcggctacccgctgccctttgacccc
gatgaccccaacactagcatggttacctcggtggccattatcgacaacaaagacccgatc
atcgtcaacggccaggtggcctccaacagctacaactcgccgtccagccacggcggtcac
aacgtcggctcgaccaacggcggggcacccctcaacggcctcccccgttcctacagcccc
tcggcggagatggcctccgatacctcctcccagcacggctaccacaacgatgtggtcaac
ctggcctcgtccatcgcgacgcaaccagagctcatcactgtgcacatggagaaaggagac
aagggcttcggcttcaccatcgccgacagtcccgggggcggagggcagagagtgaagcag
atcgtggactacccgcgctgccgtggcctcaaggagggcgacatcatcgtggaggtgaac
aagagaaatgtgcagagcatgtcgcacaaccaggtggtcgacctgctcagcaaatgtccc
aaaggcagcgaggtcaccatgctggtgcagagaggggtggcacctgcaaagaagagccca
aaactggatgattatgagcgggctccaccgtacagagattacactaggaggcaattgtcg
agaaaggacagtcagaacagctcccagcacagcgtttccagccaccggagcacccacaca
gactcgcccttgcaccctaccctggcgccgccgctcagcgagagcatcgctcccccgcca
ccctctcagcccctgccaggcctgcctccccaggactccccagcagacggcaccatccaa
agaaaaccggacccctttaagatctgggcccagtccaggagcatgtatgaaagtaggctt
ccagacttccaagagcaggacatcttcctgtggaggaaggacacggggttcggcttcagg
atcctcggagggaatgagcccggagagccgatctacatcggccacatcgtgaagttcggc
gccgcagacgaggacgggcgtctgcgctccggcgacgagctgatcagcgtggacggcacg
gcggtggtgggcaagtcgcaccaactggtggtgcagctgatgcagcaggccgccaagcag
ggccacgtcaacctcactgtgcgccgcaaagccaactacgccgttaaagcagagggagat
gtgcctccatcgccggcgtcctcccaccacagcagcaaccaggcgcccagcctgacggag
gagatggggaagcgcaccccacagggcagccagaactccctcaataccgtgagctccggc
agcggctccacctccngcatcggcagcgggggagggggcggaggggcgggcggcagcggc
aacgccgtggtggcctcagcggtccgcccctacgacgtagagatccgccgcggcgagagc
gagggattcngtttcgtcatcgtctcgtcggtgtcgcggcccgaggctggcactcttttc
cctggcaatgcatgtgtggccatgccccacaaantagggcgcatcattgagggcagccca
gcggaccgctgcgggaagctgaaggtcggtgaccgcatcctggctgtgaacggggtctcc
atcaccaacaagtcgcactctgacatcgtcaacctcatcaaggaggccgggaacaccgtc
acactacgcatcattcctgagacgtcatcaaatgcgtctttgttgaccaatgcggagaag
atcgccacaataacgaccactcacacatctcagcagctggctgcacccgaggccaggaac
aacaccaaaccaaaacaggaatcgtttgaattcaaagcaccgccagggcctcctcctcaa
cccccgacacaagtctccactcaggattctgagttttactccgtagacctggaccgagac
aacaaaggctttggcttcagcctgcgggggggcagagaatacaacatggacctgtacgtg
ctgcggctagctgaggaaggagcagctgtccgcaacgggaagatgagggtcggcgacgaa
atcttggagatcacggcgagaggcaccaagggcatgaagcacgcgcgagccatcgagctc
atcaagagtggaggccggcgcgtccatctggtgctcaagaggggtgatggctctgtgccg
gaatatggtgggtcaatctacgaaaacattcccttctcccccatcttcacgccctga
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