KEGG   Cyclopterus lumpus (lumpfish): 117730752
Entry
117730752         CDS       T09199                                 
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04145  Phagosome
clum04540  Gap junction
clum04814  Motor proteins
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117730752 (tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    117730752 (tubb1)
  09142 Cell motility
   04814 Motor proteins
    117730752 (tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117730752 (tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clum03036]
    117730752 (tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117730752 (tubb1)
   04147 Exosome [BR:clum04147]
    117730752 (tubb1)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117730752 (tubb1)
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117730752 (tubb1)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117730752 (tubb1)
  Exosomal proteins of colorectal cancer cells
   117730752 (tubb1)
  Exosomal proteins of bladder cancer cells
   117730752 (tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 117730752
NCBI-ProteinID: XP_034388603
Ensembl: ENSCLMG00005013212
UniProt: A0A8C2ZGP3
LinkDB
Position
5:complement(19228026..19231407)
AA seq 473 aa
MREIVHLQIGQCGNQIGSKFWEVISEEHGINATGIYVGDSDLQLERANVYFNEAQGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVIDRV
RHESESCDCLQGFQLVHSLGGGTGSGMGTLIINKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVCMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMSGFAPLTARGSQQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIHQKNSHYFVDWIPHNFKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFSLMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATTDRDSEAEDEEEEGPSSAATTNVQSRVEVKLETVTETNKETVVE
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtacatttgcaaattggacaatgtggcaaccagatcggctcaaagttt
tgggaagtgattagtgaagaacatgggatcaatgcaacaggcatctacgtgggagacagc
gacctccaactggagagggccaacgtctacttcaatgaggcacaaggtggtaaatatgtc
cccagggccctgctggttgacctggagcccggtacgatggacagtgtgagaggaagccgc
atcggagccctttttaggccagacaacttcatccatgggaactcaggagctggaaataac
tgggcgaagggccactacacggagggagcggagctggtggagcaggtgattgacagagtg
aggcacgagagtgaaagctgtgattgcctgcagggctttcagctggttcactcactggga
ggtggcaccggctctggcatgggaaccctcatcatcaacaagatccgagaggagtaccct
gaccgcatcatgaacaccttcagcatcatgccctcccctaaagtctccgacacggtggtg
gagccctacaacgccacactgtcagtccaccagctcctggagaacacagacgagaccttc
tgcatcgacaacgaggccctctacgacatctgcttccgcacgctgaaactgaccacgccg
acatacggggacctcaaccacttggtctgcatgaccatgagcggggtcacgacctctctg
agattccctggacagctcaacgcggacctgaggaagctggctgtcaacatggtgcctttc
cctcgtctccatttcttcatgtcaggctttgcccccctgacggcccgcggcagccagcag
tatagagccctcacggtgcctgagctcacccagcagatgttcgatgcccgaaacatgatg
acagcgtgcgacccgaggaggggccgctacctcaccgtggctggcatcttccgtggacgg
atgtccaccaaagaggtggatgagcagatgcttgcaatccatcagaaaaacagccactac
ttcgtagactggatcccccataacttcaaggtcgctgtgtgtgacatcccacctcgaggc
ctcaaaatggcctccaccttcatcggcaacaacacggcaattcaggagatattccgccgt
gtgggcgagcagttctccctgatgttcagacggaaggcttttctccactggtatacagga
gaaggtatggatgaaatggagttcactgaggcagagagcaacctcaacgacctggtgtcg
gagtaccagcagtaccaggacgccaccactgatcgcgattcggaagcagaggatgaagaa
gaggagggtccctcatcagcagcgacaacaaatgttcagtctcgagttgaagttaaactg
gaaacagttactgaaacgaacaaagagactgtggttgagtag

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