Cyclopterus lumpus (lumpfish): 117730752
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Entry
117730752 CDS
T09199
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04540
Gap junction
clum04814
Motor proteins
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117730752 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
117730752 (tubb1)
09142 Cell motility
04814 Motor proteins
117730752 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117730752 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117730752 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117730752 (tubb1)
04147 Exosome [BR:
clum04147
]
117730752 (tubb1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117730752 (tubb1)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117730752 (tubb1)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117730752 (tubb1)
Exosomal proteins of colorectal cancer cells
117730752 (tubb1)
Exosomal proteins of bladder cancer cells
117730752 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
117730752
NCBI-ProteinID:
XP_034388603
Ensembl:
ENSCLMG00005013212
UniProt:
A0A8C2ZGP3
LinkDB
All DBs
Position
5:complement(19228026..19231407)
Genome browser
AA seq
473 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINATGIYVGDSDLQLERANVYFNEAQGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVIDRV
RHESESCDCLQGFQLVHSLGGGTGSGMGTLIINKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVCMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMSGFAPLTARGSQQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIHQKNSHYFVDWIPHNFKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFSLMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATTDRDSEAEDEEEEGPSSAATTNVQSRVEVKLETVTETNKETVVE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtacatttgcaaattggacaatgtggcaaccagatcggctcaaagttt
tgggaagtgattagtgaagaacatgggatcaatgcaacaggcatctacgtgggagacagc
gacctccaactggagagggccaacgtctacttcaatgaggcacaaggtggtaaatatgtc
cccagggccctgctggttgacctggagcccggtacgatggacagtgtgagaggaagccgc
atcggagccctttttaggccagacaacttcatccatgggaactcaggagctggaaataac
tgggcgaagggccactacacggagggagcggagctggtggagcaggtgattgacagagtg
aggcacgagagtgaaagctgtgattgcctgcagggctttcagctggttcactcactggga
ggtggcaccggctctggcatgggaaccctcatcatcaacaagatccgagaggagtaccct
gaccgcatcatgaacaccttcagcatcatgccctcccctaaagtctccgacacggtggtg
gagccctacaacgccacactgtcagtccaccagctcctggagaacacagacgagaccttc
tgcatcgacaacgaggccctctacgacatctgcttccgcacgctgaaactgaccacgccg
acatacggggacctcaaccacttggtctgcatgaccatgagcggggtcacgacctctctg
agattccctggacagctcaacgcggacctgaggaagctggctgtcaacatggtgcctttc
cctcgtctccatttcttcatgtcaggctttgcccccctgacggcccgcggcagccagcag
tatagagccctcacggtgcctgagctcacccagcagatgttcgatgcccgaaacatgatg
acagcgtgcgacccgaggaggggccgctacctcaccgtggctggcatcttccgtggacgg
atgtccaccaaagaggtggatgagcagatgcttgcaatccatcagaaaaacagccactac
ttcgtagactggatcccccataacttcaaggtcgctgtgtgtgacatcccacctcgaggc
ctcaaaatggcctccaccttcatcggcaacaacacggcaattcaggagatattccgccgt
gtgggcgagcagttctccctgatgttcagacggaaggcttttctccactggtatacagga
gaaggtatggatgaaatggagttcactgaggcagagagcaacctcaacgacctggtgtcg
gagtaccagcagtaccaggacgccaccactgatcgcgattcggaagcagaggatgaagaa
gaggagggtccctcatcagcagcgacaacaaatgttcagtctcgagttgaagttaaactg
gaaacagttactgaaacgaacaaagagactgtggttgagtag
DBGET
integrated database retrieval system