Cyclopterus lumpus (lumpfish): 117730757
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Entry
117730757 CDS
T09199
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117730757 (traip)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117730757 (traip)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117730757 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
HIP1_clath_bdg
zf-C3HC4_4
Lzipper-MIP1
ATG16
zf-RING_Vps41
Zn_ribbon_8
RING_XB3-XBAT31
Gp58
CENP-F_leu_zip
zf-RING-like
zf-RING_16
Aminoglyc_resit
KxDL
zf_RING_Vps8
Fez1
WEMBL
RINGv
Nuf2_DHR10-like
GAS
zf-Nse
DUF6776
DUF1664
Motif
Other DBs
NCBI-GeneID:
117730757
NCBI-ProteinID:
XP_034388611
Ensembl:
ENSCLMG00005012422
LinkDB
All DBs
Position
5:3049975..3054362
Genome browser
AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFHTAPTKTCPQCRKQVSTRHIIN
KLYFDIGGEEEGSTKDPEILQNDLDRMKALLSSKERDWRDKQKTMDSLKDIVDKQKRDLD
GVRKDIMEKEMLCSTLRKQMTYLETQKNETQAAKEEARRLRTRMKTFESLDVLLQGQRAE
VESMITDMGVSQAAVEQLSIYCISLKKEYDNLKGSLKSTNDLCEKLKREVLTSNNKLHKS
TVEVNRTREDMTSLQNDLASADKEISSLKKKVEFLQRTLSTPTRANEALSRLVFESPAPM
ELKQPRLHQPADSQGIDLNMTYDVTTPDVAKRPKQCQSKKMRLDPLALPVSKHCEKSSSL
SKAREEDGSLDPFLRNSLLFRKKTFGSMLDPQRKLGVVKTGYDGLGGRTKFIQPSPLSEI
RPLMKAKRKNVSRPQPKIATCLTMDSFLQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcatattgcaccatttgctccgatttcttcgatcactccagagatgtc
gctgccatccactgcggacacacgttccactatgaatgtctcctccagtggttccatacg
gctccgacaaaaacctgtccacaatgtagaaaacaggtcagcaccagacacatcatcaac
aagctgtactttgacattggtggagaggaggaggggagcaccaaggaccctgaaatattg
cagaacgaccttgaccgaatgaaggcgctcttaagctccaaagagcgagactggcgggac
aagcagaagacgatggacagtttgaaagacattgtggacaagcagaagagagacctggac
ggcgtgcggaaggacatcatggaaaaggagatgctctgttctaccctcagaaaacagatg
acataccttgagacgcaaaagaatgagacccaggcggccaaggaggaagcccggagactg
aggaccagaatgaaaacctttgagagcctggatgtgttgttgcagggccagagagcagag
gtggagtccatgatcacagatatgggcgtcagccaggcggcagtggagcagctctccatc
tactgcatctcgctcaaaaaagagtacgataatctaaaaggaagcctgaagtctacgaat
gacctgtgtgagaagctgaagagagaagtgctcacctcaaacaacaagttgcacaaatcc
acagtggaggtgaatcggaccagagaggacatgacgtctctgcagaacgatttggccagc
gccgacaaggagatctccagtctcaagaagaaagtggagtttcttcagaggactctgagc
accccgacgcgggccaacgaagccctcagtcggctcgtctttgaaagcccggccccgatg
gagctgaagcagcctcgcctccaccagcccgcagacagccagggcatcgacctcaacatg
acctacgacgtcaccacgccagacgtggccaagaggccgaagcagtgccaatccaagaag
atgcgtcttgatcctctggcgttgcctgtgtccaaacactgcgagaaaagttcctcttta
agcaaggctcgagaagaggacggatccctggatccttttctgaggaactccctcctcttc
agaaagaagactttcggcagcatgttggaccctcagaggaagcttggagttgtgaaaact
ggttatgatggtttaggaggacgaactaaattcatccaaccttctccgttatcagagatt
cgcccgctgatgaaagccaaaaggaaaaatgtgagcaggccccaacccaagattgcaacc
tgcctgacgatggacagcttcctgcaataa
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