Cyclopterus lumpus (lumpfish): 117730784
Help
Entry
117730784 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 9-like
KO
K08624
a disintegrin and metalloproteinase with thrombospondin motifs 9 [EC:3.4.24.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117730784
Peptidases and inhibitors [BR:
clum01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117730784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
TSP1_spondin
Pep_M12B_propep
Reprolysin_5
TSP1_CCN
Reprolysin_3
Reprolysin_2
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117730784
NCBI-ProteinID:
XP_034388661
Ensembl:
ENSCLMG00005007866
LinkDB
All DBs
Position
5:complement(5612212..5650755)
Genome browser
AA seq
1943 aa
AA seq
DB search
MHVLFWGLGFLLFPDFLSVVASTGKLLLNSSTVKQEIGAYEIVNTGASEXSRDKFPTSVH
FKRKRRSLDESTGNTTDNWASPNTHYRISAFGQHYHLNLTLDSGFIAPLYTVTVLGVPRG
DNGTEFATDGEEEEEEEEDTELRHCFYKGLVNAQAEHAAVISLCSGLLGTFRSPEGEYFV
EPLHSYQGEHYEEEHTKPHIVYRKRASKKQTSEENSACDTSGHKHRYKRHKLKKRPVAEL
TTVSNAAPVVTAGIFNDLESLSAGVAGDTLLRSESGSAGARPSNDSSGDSGPHRRSKRFL
SYPRFVEVMLVADSKMVEHHGGNLQHYILTLMSIVSSIYKDPSIGNLINIVIVKLVIINN
ELDGPVISFNAQTTLKNFCIWQQSQNLLDDSHHSHHDTAILITRQDICRARDKCDTLGLA
ELGTVCDPYRSCSISEDNGLSTAFTIAHELGHVFNMPHDDSNKCKEDGVKIQQHVMAPTL
NYNTNPWMWSKCSRKYITEFLDTGYGECLLDEPVSRPYGLSQQLPGRIYTVNKQCELIFG
QGTQVCPYMTQCRRLWCTSPEGAQRGCRTQHMPWADGTDCSPGKHCKHGLCIAKEPEATP
MDGAWGVWSPFGTCSRTCGGGIKIAARECNRPMPRNGGMYCVGRRMKFRSCNSEPCSKQK
KDFREEQCAAFDGRHFNINGLPPNVRWVPKYSGILMKDRCKLFCRVAGSTAYYQLRDRVI
DGTPCGPDTNDICVQGLCRQAGCDHVLNSKARRDKCGVCGGDNSSCKTVAGTFNIVHYGY
NEVVRIPSGATNIDVRQHSYSGKPEDDNYLATSNSRGEFLLNGEFVVSMFKREIKVGNIV
IEYSGSDHVIERINCTDRIEEEIIVQVLSVGNLYNPDVRYSFNIPIEDKPQQFFWDAYGP
WQECSRLCQGERKRKILCSRESDRVVVSDQRCHGTARPAVITEPCNTECELRWHVARTSE
CTARCGLGYRTLDIYCAKISREDGKTQKVDDRYCSGQRKPDDKEGCHGDCNPGGWEYSPW
SECSKSCGGGTRRRGAVCRKAAEAGGDDSKCSQRDKMTVQPCNDFLCPQWKTGDWSECLV
TCGKGYKHRQTWCHFGEDRLDDRFCGSSKPESVQMCQQQECASWQVGPWGQCTTSCGPGY
QMRAVKCVVGSYGAVMDDTECNAATRPTDTQDCELAQCPSSHPVPPGTKVPSHQGHKTQW
RFGSWTQCSASCGKGTRMRYVSCRENQGGVAEESACAHLPKPPAREVCSVVFCGQWKVLE
WTACSVSCGQGKTTRQVLCVNFSDQEVNTSECDPDDRPSTEQACAMSQCPSRSSESRPFP
SSPNGSARNNLPRSQSHQWRTGPWGACSSTCAGGFQRRVVVCQDENGYPANSCEDRSRPN
EQRSCESGPCPQWIYGDWGECTKPCGGGIKTRLVVCQRPNGERFNDLSCEIHDKPPDREQ
CNTQPCPSSPNWSTDPWSSCSASCGRGFKSRKVGCATGSGRLVPDENCQHLSPKPSKQRS
CRGGRCPKWKTGNWGECSASCGDGIQQREVLCPLGDLRSPQETGCSRRSRPVSSQSCRVA
DCPSRYRWREGDWKTCSESCGAGQQRRALQCVDHNQQEVHEMYCVNQIRPPDVESCNIQA
CELIWITGEWTECSASCGLGYRRRLISCSEVHVENDNYEYGHQSLSNCPGTPPESYTPCN
LDPCPPPQEWRIGIWGPCSASCGDGVMERTVQCVSADGRQSNGCSRGFMPEAREVCRTPS
CRLPSSCHDVQSMNGPLPDSEHLVDIQGKALKVYCAGMQTETPQEYITLTTGEGENFSEI
FGFRLNDPTQCPANDSRREDCDCRRDYNAAGITAFSKVRLDLSKMDIITTDWRFAVTLEG
NSVPFATAGDCYSAARCPQGRFRVNLSGTGFKVAEDSSWISQGNYAEADVRKSQDGSRVS
GMCGGYCGKCTPSSGSSLPVTAE
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgctcttctggggcttggggttcctactattccctgatttcttgagcgtagtc
gcatctacggggaaattgcttttgaattcaagcacagtaaaacaggagatcggcgcttat
gagattgtaaacaccggtgcgagtgagtgaagccgggacaagtttccaaccagtgtgcac
tttaagaggaagagacgaagtttggacgagagcaccgggaatacgacggataactgggcc
tcgccgaatacccactacaggatatctgctttcggacagcattatcacctcaacctcacg
ctggattcgggatttatcgcacctctctacactgtgacagtactcggagtgccccgagga
gacaacgggacggagtttgcaacagatggggaggaggaggaggaggaggaggaggacacg
gagttaaggcactgcttctataaaggactcgtaaatgcacaagcagaacacgccgcggtc
atcagtttgtgctccggactgcttggcactttcaggtctccagaaggggagtattttgtg
gagccccttcacagctatcaaggagaacactatgaagaggaacacacaaaacctcatatt
gtatacaggaagcgtgcatccaagaaacagacatctgaggagaactctgcttgtgacacg
tcaggacacaaacacagatataagagacacaagcttaagaaaaggccggtggctgagctg
accaccgtctccaatgcagcccctgtggtcaccgctggcatattcaatgacttggagtca
ctgagtgccggcgtggccggcgacactttgctcagatcggagagcggcagtgccggcgcc
agaccgtcaaacgatagcagcggtgactcgggacctcacaggagatcaaagcgcttcctc
tcctacccgcgcttcgttgaagtcatgctggtggccgacagcaagatggtggagcatcac
ggcggcaacctgcagcactacatactcacattaatgtccatagtatcttccatctacaag
gaccccagcattggcaatctgattaacattgtgattgtaaagttagtcataataaacaat
gagctggatggtccggtcatttcattcaatgcacagaccactttaaagaacttctgcatt
tggcagcagagccagaaccttctggatgacagccaccattcccatcacgacactgccatc
ctgatcaccaggcaggacatatgcagagcaagggacaagtgtgacaccttaggacttgcg
gagttgggcacggtgtgtgatccgtacaggagctgcagtatcagcgaggacaacgggctc
agcactgcgttcaccatcgcccatgaacttggccatgtgttcaacatgcctcacgacgac
agtaacaagtgtaaggaagatggcgttaagattcagcagcatgtgatggctcccacactt
aactacaacacaaacccttggatgtggtccaagtgtagcaggaagtacatcacagagttc
cttgacacaggatatggtgagtgcttactcgacgagcccgtgtctcggccgtacggtctc
tcgcagcagctgcccggacggatatacactgtcaacaaacagtgcgaattgatatttggg
cagggaacgcaggtgtgcccttatatgacccagtgtcggaggttgtggtgcaccagtcca
gagggcgcccagcggggctgcaggacacagcacatgccgtgggcagacggcactgactgc
tctcctggaaagcactgcaaacacggcctgtgtatcgcgaaagagcccgaagccacgccc
atggatggggcgtggggagtctggagcccttttggtacctgttcgcggacatgtggcggg
ggcatcaagatcgccgcgcgcgaatgcaaccgacccatgcccaggaatggaggaatgtat
tgcgtgggtcgccgaatgaagtttcgttcctgtaactctgagccctgctccaagcagaag
aaggacttcagggaggagcaatgtgctgctttcgacggcaggcacttcaacatcaacggt
ctacctcccaatgtccgctgggtgcccaagtacagcggaattctgatgaaggacaggtgt
aagttgttctgcagggtggcaggcagcacagcctactatcagctcagggaccgggtcatt
gatggcacaccgtgcggacccgataccaatgacatctgtgtccagggcctgtgcaggcaa
gcgggctgtgaccatgtgttgaactctaaagccaggagggacaagtgtggcgtgtgcggc
ggtgacaactcttcctgcaaaactgtggcaggcaccttcaacatcgtccactatggctat
aatgaagtggtgcgaatacccagcggtgctacaaatatagatgtgcgtcagcacagttac
tcagggaaaccagaggatgacaactacctcgccacttcaaacagccggggagagttcctg
cttaacggagagtttgtggtcagcatgttcaaaagggaaatcaaagtaggaaatatcgtc
attgagtacagtggctctgaccatgtcattgagaggatcaactgcactgaccgcatcgag
gaggagatcattgtccaggtgctgtctgtgggaaacctttacaacccagatgtcaggtac
tcctttaacatccccatagaagacaaacctcagcagttcttctgggatgcctatggtccc
tggcaggaatgcagccgcctttgccaaggagagcgcaaacgtaagattctctgcagcaga
gagtcagacagggtggtggtgtcggaccagaggtgtcacggtacagccagacctgctgtc
atcactgagccctgtaacactgaatgtgaactcaggtggcatgtggctcgaacgagtgag
tgcacggctcggtgcggcctgggatatcgtaccctggacatatactgtgccaaaatcagc
cgcgaggacggtaaaacccagaaggttgacgaccgctactgtagcggtcagcgcaaacct
gatgacaaagaaggttgccacggagactgtaaccccggtggctgggagtactctccttgg
tcagagtgctccaagagctgtggggggggcacccgccgtcgaggggcagtgtgtcgaaag
gcagccgaggccggcggcgacgacagcaaatgcagtcagagggacaagatgaccgtccaa
ccctgcaatgatttcctctgtccacaatggaagactggcgactggtctgagtgccttgtg
acatgcgggaaaggctacaagcaccgtcagacgtggtgccattttggtgaggaccgctta
gacgaccgcttctgtggctcgtctaagcccgagtcggtccagatgtgccagcagcaggag
tgtgcctcctggcaggtcggcccttggggacagtgcactacctcgtgtgggccaggctac
cagatgcgagcggtgaagtgtgtagttggctcttatggcgctgtcatggatgacactgaa
tgtaacgctgccacccggcccactgacacccaggactgtgaactggcccagtgtcccagc
agccaccctgttcctccagggactaaagtcccttcccaccagggccacaaaacccagtgg
aggtttggttcttggacccagtgtagcgccagctgtggcaaagggacgcgcatgcgctac
gtgagttgtcgtgaaaaccagggtggcgtggcggaggagtcggcgtgcgcccacctacca
aaaccccctgccagagaagtgtgctcagtagtgttctgtggacagtggaaagtgctggaa
tggacagcgtgctcagtttcctgcggccagggaaagacgacacggcaggtactgtgcgtc
aacttcagtgaccaagaagtgaatacgagtgagtgtgacccagacgatcgtccttccaca
gagcaggcctgtgctatgtctcaatgcccgtcccgctccagcgaatcccgacctttcccg
tcctcgccgaatggcagcgccaggaacaacctgccccgcagccaatcccaccaatggcgg
actggaccctggggcgcgtgctccagcacatgtgcaggaggtttccagcggcgtgtggta
gtgtgccaggatgagaacggctaccctgccaacagctgtgaggatcgcagccggcccaat
gagcaacggtcctgtgagtcggggccgtgcccacaatggatctatggcgactggggagag
tgcaccaagccatgcggcggcgggataaagacgagactggtggtgtgtcagcgtccaaac
ggcgagcgcttcaacgatttgagctgcgagatccacgacaagccaccagatcgcgagcag
tgcaatactcagccgtgcccgtctagccccaactggagcacggacccatggagctcgtgc
tccgcctcctgtggaagagggttcaagtcgcgtaaggtgggctgtgcgaccgggtcaggc
cgccttgtcccagatgaaaactgccaacatctgtcccccaaacccagcaagcagaggagc
tgcagaggtggccgatgtcccaagtggaagaccggcaactggggagagtgttcagcatcg
tgtggcgacggcatccagcaacgggaggtgctctgcccgctcggagacctccggagcccg
caggagaccggctgctcccggcgctctcgaccggtgtccagccagagctgtcgggtcgcc
gactgcccctcccggtaccggtggagagaaggggactggaagacgtgcagtgagtcgtgt
ggagcgggccaacaacgacgggccttgcagtgcgtggaccacaaccagcaggaggtccat
gagatgtactgtgtgaaccagatcagacctccagacgtggagagctgtaacatccaggcc
tgtgaattgatctggatcaccggggaatggactgagtgctcagccagctgtggactgggc
taccgccggcgtctgatctcctgcagcgaggtgcatgtggagaatgacaactatgagtat
ggccatcagtctttgtcaaactgccccgggacccctcctgagagctacacgccttgtaat
ttggacccgtgcccgccgccgcaggagtggaggattggaatctggggaccgtgttcagcg
agctgtggtgacggcgtgatggagaggacggtgcagtgtgtgtctgcagatggtcgccaa
agcaacgggtgctctcgaggcttcatgcccgaggccagagaggtctgcaggaccccgagc
tgccgtttgccttcgagctgtcacgacgtccagagcatgaacggcccgctcccagacagc
gaacacttagtcgatattcaagggaaggcactcaaggtctactgtgcaggaatgcagaca
gagactccacaggagtacatcaccttgacgacgggagaaggggagaatttttctgagatc
tttggcttcagactcaatgaccccacccagtgtccagccaacgactccaggagagaggac
tgtgactgtcggagagactacaacgccgccggcatcaccgccttctccaaagtccgcctg
gacctcagtaagatggacatcatcactacagattggaggtttgccgtcacccttgagggc
aacagtgttccattcgctacagccggagactgctacagcgccgcacgctgtccacagggg
cggttcagggtcaacctctcaggaacaggttttaaggtggctgaggactcctcgtggatc
tcccagggcaactatgcagaggctgatgtacgaaagtcacaggatggcagcagagtgtca
ggaatgtgcggcggctactgcggtaaatgcacaccgtcctctggctccagtctgcctgtc
acagcggagtag
DBGET
integrated database retrieval system
