Cyclopterus lumpus (lumpfish): 117730807
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Entry
117730807 CDS
T09199
Symbol
toporsa
Name
(RefSeq) LOW QUALITY PROTEIN: topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117730807 (toporsa)
03036 Chromosome and associated proteins [BR:
clum03036
]
117730807 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117730807 (toporsa)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117730807 (toporsa)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117730807 (toporsa)
UBL E3 ligases
117730807 (toporsa)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117730807 (toporsa)
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117730807 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
PWI_Topors
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
Baculo_IE-1
RING_XB3-XBAT31
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117730807
NCBI-ProteinID:
XP_034388729
LinkDB
All DBs
Position
1:16838382..16842370
Genome browser
AA seq
834 aa
AA seq
DB search
MLTLENQVRYFVRRSLKRRPVVPNIVALLCQAIKIALQQSQKKSRRKTSEAMFADVSPDS
KCPICLDTFHNISYLDVCLHKFCFRCIHEWSKNKAECPLCKQSFNSIYHTIKSEQDFKKY
DLQPVDNASFGTFGGVRFRYRTTLTGVHRQMRGRTSPPLDNGVMFEASANAPQQSQDRYI
RRMMMRLAARRRAASEGRAVNSLREQEMVNFRRELYRQGVKIRSVRDGGRSRETSAEFFR
RNPACLHRLIPWLKRELIVLYGAHGSLVNIVQHIIMSRITRYDMEDGAIQEELRPFLQGR
TEHFLHEFISFAKSPFNMEAYDQHAAYDCPPTFLNEDSSSSSSVIAISEDEEHSVDLNPP
GDSTSSLSHSMWDDETPGPSYSTTAEQGRAECLSVXDSDSDSSLEEETXFGVWASPQQMS
PHNQTDETQAEVNNEECLSYDSDDCVIIHFFKPTLERTPELVQLSSDSDEYASEDIKAVV
PLLPQHIRFSSLSPMASQSSDPSGAGQSENVETDHYHQLESKERCSSSTSSRHKTSSKLD
KKDRSRERHLSKDRDHRRKRRSRSAELRQSSRSPEISHISVGTLSREGGYSYSSGRDYSK
CDGNYRRRGHDHSYQSYRHYSQERNDSGMHYTERRSYYYSGRKYPDRHSSSRSRKQGQAX
TXDRHSRSRTYSSSRSPSMKKRSHNNKPGGKRKYKTRHLEETSKNPLSNSNAEGDAPILS
TKTQEKEQREASXKSKDRSRKTSRSLSVELVNEENSHERSKRHHKKKKKHKKKSKXHKSN
EHTGKHSPTVITIDSDSDSFASDTVNQASSINKDHPINSTTDGPLDTAPLDSLE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccttagagaaccaagtccgctacttcgtgcgccggagtttgaagcgtcggcca
gtggtgccgaacattgtagctttattatgtcaagcaatcaagattgccctgcagcagagc
cagaagaagagcagaaggaaaacctctgaagcaatgtttgcagatgtgtcgccggactcc
aaatgtcccatctgtttggacacatttcacaacatttcttacctggacgtctgcctgcac
aagttctgtttccgctgtattcacgagtggtccaagaacaaagccgagtgccctttatgc
aaacagtcttttaattcaatctatcacactataaaatcagagcaagactttaagaagtat
gacctgcagccggtggataatgcctcttttgggacgtttggtggagtgcggtttagatac
cgcacaactcttaccggagtccatcgacagatgcggggaaggacctctccacctctagac
aatggagtaatgtttgaggcctcagcaaacgctccccaacaatcacaggaccgctacatc
agacggatgatgatgaggctggccgctaggagaagagctgcgagtgaaggcagggcagtg
aacagtctcagagagcaggaaatggtgaatttcaggagggaactgtatcgacagggggtg
aagattcggagtgtccgtgatggtggccgctccagagaaacctcggcagagttcttccga
agaaatcctgcctgcctgcatagactgatcccctggctaaaaagagaactgattgtgctt
tacggagcccacggctctttggtcaacatagttcaacacatcatcatgtcgcgcattaca
cgttatgatatggaggatggagctattcaagaagagcttaggccgttcctccaggggcgc
acagagcactttctgcatgagttcatcagctttgcaaagtctcccttcaatatggaagcc
tatgaccagcatgctgcctatgactgcccacccacttttttaaatgaagacagcagctcc
agttcctctgtaatagctatctcagaggacgaggaacactcagtggatttgaacccccca
ggagactccacgtcttcgctaagccactctatgtgggacgatgagacgcctgggccatcg
tattctacaacggcagagcagggcagggcagagtgtctgtcggtcnccgactcagactca
gacagcagtttagaggaggagacantgtttggggtctgggcctctccacagcaaatgagt
cctcataaccaaacagacgagactcaggctgaagttaacaatgaagagtgtctgtcctat
gacagcgatgactgtgtcattatacattttttcaagccaacattagagaggactccggag
ctggttcagctgtcctctgactctgacgagtatgccagtgaagatattaaagcagtagtg
cctcttctacctcaacacatccgcttctctagcctcagtcctatggcttcacagagtagt
gatccaagtggtgctggacagtcagaaaatgtagaaactgaccactatcatcagttggag
tcaaaagaaagatgtagctcttcaacatctagcagacacaagacatccagtaagttggac
aaaaaagacagatcaagggagaggcacttgtcaaaggacagggaccatcggcgaaagagg
aggtcaagaagtgcagagctcaggcaatccagcaggagcccggagatttcccacatcagt
gtcggcactctatccagagaaggaggttattcatactcaagtggaagagactactcaaaa
tgtgacggcaattacaggaggaggggccatgatcacagctatcagtcatatcggcattac
agccaagagagaaatgatagtgggatgcattatacagagaggcggtcctactattacagc
ggccgcaagtacccagatcgtcactctagctccaggagccgcaagcagggacaggcgtag
actngggacaggcattctcgttctaggacttattccagcagtcgctccccttcgatgaaa
aagagatctcacaacaacaagcctggtggaaagaggaagtacaaaaccagacatttggag
gaaacctccaaaaacccactttcaaactcaaacgctgaaggtgacgcccccattttatca
acaaaaacacaagaaaaagagcaaagagaagcatcgtaaaaatccaaagacaggtcgagg
aagacgagcaggagccttagtgtggagctcgtcaatgaggaaaactctcacgagcgaagc
aagcgtcaccataagaagaagaagaaacacaagaagaaaagcaaancgcacaagagtaac
gaacacacggggaagcactcgcccactgtcattaccattgacagtgacagcgattctttt
gcaagcgacacagtgaaccaggccagcagcattaacaaggaccaccccatcaacagtacc
acagatggcccacttgacaccgccccgctggactctctggagtag
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integrated database retrieval system
