Cyclopterus lumpus (lumpfish): 117730876
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Entry
117730876 CDS
T09199
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117730876 (ift52)
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
117730876 (ift52)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF2194
Motif
Other DBs
NCBI-GeneID:
117730876
NCBI-ProteinID:
XP_034388816
Ensembl:
ENSCLMG00005019114
UniProt:
A0A8C3G7V2
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All DBs
Position
5:3980822..3985765
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AA seq
432 aa
AA seq
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MEKEALNAVVFNVSKRELFTTNNGYKSVQKRLRAQWKIQSMKEELSLEKLKGVKLWITAG
PREKFTASELEVLKLYLDGGGNVLVMLGEGGEMKYNTNINFLLEEFGVMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEEENVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFHQGKEGGKLVVLGSCHMFSDQYIDKEENSKILDVVLQWLM
ADNIQLNQIDAEDPEITDYTMLPDLGCLAEQLRVCLQVGDENPRDFTSLFDMSLFNLSTD
ALPQVISAYKQLNVKDEPLQLIAPHFETPLPQLQPAVFPPALSELPPPMLDLFDLDEAFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEQRDAKHILEHIFFQVVEFKKLN
QEPDTEAPFTPL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaagcgctgaacgcggtcgtcttcaacgtgtcgaagagagagctgttcacg
acgaacaatggctacaaatccgtccagaaaagactgagagctcaatggaaaatccaaagt
atgaaggaagagctgtctctggagaagctgaagggtgtcaagttgtggataaccgctgga
ccaagggagaagttcacagcttcagagctggaggtgctgaagctgtacctggacggggga
ggaaacgtcctggtcatgctcggtgaagggggagaaatgaagtacaacaccaacatcaac
tttctcctggaggagtttggcgtgatggtcaacaatgatgctgttgtgagaaatgtgtat
tacaaatacttccatccgaaagaggcgctggtgtccaacggtgtgttgaacagagagatt
agtcgggctgctggcaaagtggtcacgggcatcatcgaagaggaaaatgttggaaacaat
gcacaggctctcacgtttgtgtacccgtacggagccacactgagcgtgatgaagccggct
gtggccgttctttcaactggctccgtctgcttccccctcaacaggccggtcctggcattt
caccaaggaaaggagggtggcaaactggtagtgttgggttcctgccacatgttcagtgac
caatacatagacaaagaggagaacagtaaaatcctggatgttgtgctgcagtggctcatg
gctgataatatccagctgaatcagattgacgcagaagacccagagatcacagattacacc
atgctgccagacttagggtgcttggcggaacagctcagagtgtgcttacaagtgggtgac
gaaaaccccagggacttcacctcgctgtttgacatgtccttgttcaatttgtcaaccgac
gccttaccccaagtcatcagtgcctacaagcagcttaatgtcaaagacgagccacttcag
ctgatagcgccacattttgagacgccgctgcctcagctccaacccgctgtctttccacct
gccttaagcgagttgcctcctcctatgctggacctgttcgaccttgatgaagctttctcc
tcggagaaagtgcgcctggcacagctcaccaataaatgtacggacgatgatcttgaattc
tacgtgcggaaatgtggcgagatcctgggggtgactccaaagttggacaaagagcagagg
gatgccaagcacatcttggaacacattttcttccaggttgtggagttcaagaaactcaat
caggagcccgacaccgaggcaccattcacaccgttgtga
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