Cyclopterus lumpus (lumpfish): 117730882
Help
Entry
117730882 CDS
T09199
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117730882
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117730882
04261 Adrenergic signaling in cardiomyocytes
117730882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117730882
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117730882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
dCache_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
117730882
NCBI-ProteinID:
XP_034388826
Ensembl:
ENSCLMG00005006151
LinkDB
All DBs
Position
5:15171536..15200585
Genome browser
AA seq
1096 aa
AA seq
DB search
MAIGKRSCSIVCLVSIQIILIFSASWPGAAGLTFPQQYTIMHWARRIEQEIDRVFQHITG
AQQLKGIYNEERRRFSLVKNQPRKIVEKVASDIEKLLAKKRKALDRLASEAERLQREHLW
QDGIKELDMAYYDSKAELDYYSMDGEGEVENPSHIKLEFVYDPNFKNNVNYSYTAVQIPT
DIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWKAPDKID
LYDVRRRPWYIQGASSPKDMIILVDVSGSVSGLTLKLIKASVIEMLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKDEVQQMQAKGTTDYKSGFHFAFNQLLNKTNIPRA
NCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSDAKQVQWTNVYQDALGLGMVVTGTMPVFNLTM
DGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLQPKPVNLP
EPVTLDFLDAEVEDSNKEEIRRQMIDGRPGEMQVKTLVKSIEEKYIDDVYRSYTWTPING
TDYSLGLVLPPYNEYFIQADLSDVMLQLQYMQSLLPSSFESSGHVFLAPREYCKRLHLSD
NNTQFLQNFLSLMLDISPESDECDQGLIHNLILDSRIIGQLASRVWKNKDLNSYGFLAVF
ASTDGGITRVFPNLAAESWDEDPEPFNSNYYRRSLDNKGYMFRAPSRSSLDDPVGAENGT
VGILVSSAVEVNLGGKLLKPSVVGVKLDLEAWVDKFKILASNVSDSRQGSHKCGPSRSCE
MDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKIGLFFGDVDPYLMHALYNNSIFNRRQSF
HYQSACEPISSSHTGAAPRGIFVPSIADILSLAWWTSTVAWSVTQQLLYGLAYNSWLYQD
DLLVEGFETRESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAET
LPCSSCEIERLTQIKTEFQEENPCEVLSNARYRKGPTSCFDYSALENTSECGRGCALQSS
IGVLLFIQLTLPLFHL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaaaggtcttgcagcatcgtctgcttggtatctatccagattatcttg
atcttcagcgcatcgtggcctggagcggcgggtctcacgttcccacagcaatacacgata
atgcactgggccagacgtatcgaacaggagattgacagagtctttcagcacatcactggc
gctcagcagttgaaagggatatacaatgaagaaagacgacgatttagtctcgtgaagaat
cagccccggaagattgtggagaaagtggcctcagatatagagaaactcctggctaagaag
cgcaaagcgctcgataggttagccagtgaagcagagcggctccagcgagagcatctatgg
caggatggaatcaaggagctggacatggcttattatgactccaaggcagagctggactat
tactccatggatggagaaggagaggtggaaaatccttcacacatcaagctggagtttgtc
tatgatccaaacttcaaaaataatgtcaactattcctacacagctgttcagattcccacg
gatatttataaaggagctccagttattctgaatgagttgaactggacgcaggcgctggag
aaagtcttcatggagaacagtcaggaggatccatcactgctgtggcaagcgttcgggagt
gctactggtgtcactcgctactacccagctacaccttggaaagctcccgataaaatcgat
ttgtatgacgtcaggaggagaccctggtacatccagggagcctcatccccaaaagatatg
atcattcttgttgatgtgagcggcagtgtcagtggactcaccctgaagctcatcaaagcg
tcggtgatagaaatgctggacactttgtctgatgatgactatgtcaatgtggccaggttc
aacgagaaggccgaggctgtggttccctgcttcaaacatctcgtccaggctaacgtgcgc
aacaaaaagatcttcaaggatgaagtgcagcagatgcaggctaaaggcaccactgactac
aagtctggttttcattttgccttcaaccagctgttaaataagacaaatattcctcgggcc
aactgcaataaaataatcatgctgtttactgatggaggagaggacagagctcaggatgtc
ttcatgcaatacaactggcccaacaaaacggttcgagttttcaccttttctgtgggtcaa
cacaactatgatgttacacctttacagtggatcgcatgcaccaataaaggttactatttt
gagatccggtccatctgtgctataaggattaacacccaggagtacctcgacgtgctgggg
cgtcccatggtgctggcaggcagtgatgccaagcaggttcagtggacgaatgtgtaccag
gatgctttgggtcttggaatggtagtaactgggactatgcccgtatttaatctcaccatg
gatggaaactcacagaatcagctgatattaggtgtcatgggggtggacgtgcatctagat
gagataaagcgcctaacaccacggtacaatcttggagccaatggatacatatttgccatt
gatccaaatggatatcttctccttcaccctaaccttcagccaaagccggtgaacctccct
gagcctgtgacgctggacttcctggatgcagaggtggaggacagcaataaagaggagatc
cggcgacaaatgattgatggaagaccaggtgaaatgcaggtcaaaactctagtcaagtca
atcgaagagaagtacattgacgatgtatacaggagttacacctggactcctatcaacggc
acagattacagtcttggtctggtattacccccctacaatgaatacttcatccaggcagac
ctgagtgatgtgatgctgcagctccagtatatgcagtcactcctgcccagctcctttgaa
tcctcaggacacgtgtttctggctcccagggaatattgcaaacgtctgcatctttctgac
aacaacacccagtttttgcagaacttcctctcgctcatgctggacatttctccagaatct
gatgagtgtgatcaaggcctcatccacaacctgattttggattctaggattatcgggcag
ctggcctctcgtgtttggaagaacaaggacctgaattcgtacggcttcctggctgtattt
gcgtccactgatggaggaataacacgtgttttccccaacttagctgctgagtcatgggat
gaggatcccgaacccttcaattcaaattattatagacggagcctcgacaacaaaggctac
atgttcagagctccatccagatcctcgttagacgaccctgtaggtgcagaaaatggcacc
gttggaattctggttagttcggccgtggaggttaatttaggaggcaaactgctcaaacct
tcagtggtcggagtgaagctggacttggaggcgtgggtggacaagtttaagatcctggcc
agcaatgtgtcagacagtcgacagggctcacacaagtgtggaccatccagaagctgtgag
atggactgtgaagtgaacactgacgacctcctctgttatctcattgatgatggtggattc
ctggttatgtcaaatcaaagagatcattggaaaaagattggtcttttctttggtgatgtt
gacccttacctgatgcatgcactctacaacaactccatcttcaatcgccgtcagtctttc
cactaccagtctgcatgtgaaccaatcagcagcagccatactggtgcagcaccaaggggc
atctttgtgccctccattgctgatatcctcagcttggcctggtggacttccacggtggca
tggtctgtgacccagcagctgctatatggactcgcctacaacagctggctctaccaagat
gatctcctggttgaaggttttgaaacaagggaaagcagctgtgtgaccatccaaagccag
ttctactttacaaacaccaccaactcctacaatgtgctgcaggactgtggaaactgctca
cggctttttcacgctaaacggatagaaaatactaacctcctctttgtggtcgctgagacg
ctcccctgcagctcatgtgagatagagagattgacgcagatcaagacagagtttcaggag
gagaatccatgcgaagtactgagcaacgcacgatatcgtaaaggcccgacatcctgcttt
gactacagtgccttagaaaacacgtctgagtgtgggcgaggttgtgcactacaatcctct
attggagtccttctctttattcagcttactctgcctctttttcatctctga
DBGET
integrated database retrieval system
