KEGG   Cyclopterus lumpus (lumpfish): 117730949
Entry
117730949         CDS       T09199                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117730949 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clum03036]
    117730949 (kdm5ba)
Enzymes [BR:clum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117730949 (kdm5ba)
Protein phosphatases and associated proteins [BR:clum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117730949 (kdm5ba)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117730949 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN
Other DBs
NCBI-GeneID: 117730949
NCBI-ProteinID: XP_034388918
Ensembl: ENSCLMG00005016153
UniProt: A0A8C3A1G0
LinkDB
Position
5:complement(11997972..12018020)
AA seq 1486 aa
MTQPQLNEFIPPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPEWQPPFACD
VDRLKFTPRIQRLNELEAQTRVKLNFLDQIAKFWEFQGCTLKIPHVERKILDLYQLNKLV
NEEGGFDAVCRERRWTKISVKMGFAPGKAIGSHLRAHYERILYPYNLFQNGGNQPRATLT
NDTKDKEYTPHDLPQRQSVQPQETCSIARRAKRMRSERGSFKTEPGEVCENRPNLRRRMG
TYVVKQEPVRPVVTEVKREPIKHENPVDYEEETVLDKRRPSSKIDQYMCLVCGNGTAEDR
LLLCDGCDDSYHIFCLMPPLHDVPKGDWRCPKCLAQECGKPPVAFGFEQAGRSYTLQAFG
DMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPLSNS
HFEVTPEDEHYLSSGWNLNNMPVLESSVLNHITADICGMKLPWLYVGMCFSSFCWHIEDH
WSYSINYLHWGEPKTWYGAPGYAAEHLESVMKNLAPELFESQQDLLHQLVTIMNPNTLMN
NGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPIGRKCVAHYRQLSR
YCVFSHDEMVCNMAYKADAMDVNLASKVQKEMTVMVHEEEQLREKINKLGVVQSRQVDYE
VLPDEERQCSKCRTTCYLSGITCACSPGKMVCLYHTRDLCSCPPSNLTLHYKFTLEELYP
MMESVKLRAESYKEWLSSVQDILENKGNKKRGLEELHSLVEQAETKAFPQISLLDQLRTV
ASEADKVAVMAQQLLNGKRQTRYRSGGGKSQNQNELTVEELRSFVRQFDNLPCNIRQAPL
LKDLLTRVDDFQQRSEHLLSDESPSPLELQDLLDESLGLDVELPQLPLLRERLEQARWLE
AVQQASSRPESLCLDTMRRLIDQGVGLAPHSSVERAMARLQELLTVSEQWEERALSHMEA
RPHRNMETLDAALQEVENIPAYLPNCLQLKDVVTKAKKWLHEAEALQLGGRIPVLDSLSE
LLLRAEGIPVMLEPLSRIEVLVSDVQTWKESAAKTFLLKNSPFSLLEVLCPRCDVGTGHQ
KSRSKKAKEATQISKKSPTKLESLSDVERALSESKDSASAMATLAEVRQREMDILLALRA
SNESKLVPAEHCCALGVCVCQKAPSGAMMQCELCREVFHCGCVTTPVNLEYGQAWLCPLC
QWSRKPPLDKVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRVQQACTEGVLKKVSKM
GRVGPGMSSHLTQEINGSFFHTEHQSVPLQGLGHELEELMVEGFLLQVTLPETEQLYKYL
LYKLVPLLSHGAPCGNNTEQDQQSQRGSPHHNKNGVSGLKKEALNSPSKRTKRRKESFDS
QQSEKAKKIRKNKFKKSKEKCEDTTWACSPTHPVSDPTASDSEEDYSLCAAPWCREPEGD
EVNWVQCDGSCNQWFHQVCVGLSAERAEKDDYICISCTQPDYDRGE
NT seq 4461 nt   +upstreamnt  +downstreamnt
atgactcaaccacagctgaatgagttcattcctcctccggagtgccctgtttttgagccc
agctgggaggaatttgccgatccttttgcgtacatcaacaaaatacgacccattgcagag
aaaactggcatctgcaaggtccgaccaccgccggaatggcagccaccatttgcctgtgat
gttgacagactgaaattcacaccaaggatacaaagacttaatgagttagaggctcagacc
agagtcaagttgaacttcctggatcaaatagcaaaattctgggagtttcaaggatgcact
ctgaaaatccctcacgtggaaagaaagattttggatctttaccagctgaataaacttgtg
aatgaagaaggaggctttgatgccgtctgtcgagagcggcgctggactaagatatctgtc
aagatgggctttgctccaggcaaggctattggctctcatctgcgggcacactatgagaga
atcctctacccatacaacctgttccagaatggaggcaatcagcctagagccaccttgacc
aatgacactaaagataaagagtacaccccacacgacctgccgcagcggcagtctgtccag
cctcaggagacctgcagcattgctcgccgtgcgaaacgcatgagatctgaaagaggcagt
tttaaaaccgaaccaggggaagtttgtgagaatcgtcccaatctcaggaggaggatggga
acgtatgttgtcaaacaagaacctgtgagaccggtggttactgaggtgaaacgggagccc
attaaacatgagaatccagtagattatgaagaagaaactgtactagataagagacgtccc
tcgagtaaaatagaccagtacatgtgccttgtttgtggcaacgggactgctgaggaccgc
ctgctgttgtgtgatggctgtgatgacagctatcacatcttttgtctgatgcctcccctc
cacgatgttcccaaaggcgactggaggtgtcccaagtgcctggctcaggaatgtggcaaa
cctcctgttgcatttggctttgagcaggccggcaggagctacaccctccaggcttttggt
gacatggccgattccttcaaatcagattatttcaacatgccagtccatatggttcccact
gagctagtggagaaggagttctggcgtctagtcagcaccattgaggaggacgtcactgtg
gagtacggagcagacatcgcctccaaggagtttgggagtggtttccctttgagtaacagc
cattttgaagtcactcctgaggatgagcattacctgagcagcggctggaacctgaacaac
atgccggtgctggaatcctctgtgctgaatcacattacagccgacatctgcgggatgaag
ttaccctggctttatgtggggatgtgcttctcctccttctgctggcatattgaggaccac
tggagctactccataaactatcttcactggggggagccaaagacgtggtatggggctcct
ggttatgccgcagagcacctcgagtcggtcatgaagaacctggcacctgagctgtttgag
tcccagcaagacctccttcaccagctggtcaccatcatgaatcccaacacgctgatgaac
aacggcgtcccgatctatcgcaccaaccaatgtgcaggggagtttgtcatcactttcccc
agagcctaccacagtgggttcaaccagggcttcaactttgctgaagctgtcaacttttgc
accatggactggatgcccatcggccgtaaatgtgtggcacactatcgccagctgagcagg
tactgtgtcttctcacacgacgagatggtttgtaacatggcctacaaagcagacgcgatg
gatgtcaatctggcatccaaagtgcagaaggagatgaccgtcatggtccatgaagaagaa
caactgagagagaagattaataaattgggtgtggtgcaatctcgacaagttgattatgaa
gttctccctgatgaggagaggcagtgcagcaagtgtcgaaccacctgctacctgtctggc
atcacctgtgcctgcagtcctggcaagatggtgtgtctgtaccacacccgggacctctgc
tcctgtcctcctagcaaccttacactccattacaagtttacactggaggagttgtatccg
atgatggaatcagtgaagctgcgtgccgagtcctataaggaatggctctctagtgtgcag
gacatcctggagaacaaaggaaacaagaaaagaggtttggaagagcttcacagcctggtg
gagcaggcagaaacaaaggcgttcccacaaatcagcctcctggatcagctacgcacagtc
gcatcagaagctgataaagttgctgtcatggcccaacagcttcttaatggaaagaggcag
acgaggtatcgttcgggaggaggaaagtctcaaaaccagaacgagctaactgttgaagag
ctgaggtcttttgtccgacagtttgataacctgccgtgcaacatccgacaagctccttta
ctaaaggacctgttgacccgggtggatgacttccagcagcgcagtgagcatctcctctct
gatgagtcacccagcccgctggagctgcaggacctgctggacgagagcctgggcctggac
gtggagctgccccagctgcccctgctgcgggagagactggagcaggcccgctggctggag
gctgtgcagcaagccagcagccggccagaaagcctctgcctggacaccatgagaaggttg
atagaccagggtgtgggtttggcccctcacagctctgtggaaagagccatggctcgtctg
caggagctgctgactgtgtcggagcagtgggaggagcgggccctcagccatatggaagcc
aggccgcatcgcaacatggaaacactcgatgccgctctacaagaagtagaaaacatccct
gcttatctgcccaattgtctgcagctgaaggacgtcgtcaccaaggccaagaaatggctc
catgaagccgaagcacttcagctcggtggacgtattcctgtgctggacagcctctctgag
ctgctcctcagagcagagggcatcccggtgatgctcgaaccgctgagtcggatagaggtc
ctcgtcagtgacgtgcagacctggaaggagagcgcggcaaagacattcctactgaaaaac
tcgcctttctctctccttgaggtgctttgtccaagatgtgatgtaggcactgggcatcaa
aagtcgagatctaaaaaggcaaaagaagctacacagatcagtaaaaaatctccaacaaaa
ctggagtctttgagtgacgtggagagagctctctctgagagcaaggactctgcctctgcc
atggcaactctcgcagaggtccgccagagggagatggatatcttgttggctctgcgtgct
tcaaacgagtccaagcttgttccggctgaacactgttgtgcacttggtgtttgcgtttgc
caaaaggccccttcaggtgccatgatgcagtgtgaactctgccgagaagttttccactgc
ggttgcgttacaacaccggtaaacctcgagtacggccaagcctggctctgcccactttgc
caatggtcgaggaaaccccctctggacaaggtcctgcctttgttggcttcactgcagagg
attcgtgtacggctgccagaaggggacgccctgcgcttcctcatcgaaaggacggtgcgc
tggcagcacagagttcagcaggcatgcacagagggggtgctgaagaaagtgtcaaagatg
gggagagttggacctggaatgtcttcacatctgactcaggaaataaacggttcatttttc
catacagagcaccagtctgttccactccagggactcggccatgagctggaggagctgatg
gtggagggattcctactgcaggtcactctgcctgaaactgagcagctgtacaaatacctg
ttgtacaaactggtcccactgctctcacatggcgccccttgtgggaacaacacagaacag
gaccaacagtcacagagagggagcccccaccacaacaagaatggcgtttccggtctcaaa
aaggaggcgctgaacagtccgagcaaaaggaccaagcggcgtaaggaaagcttcgactcg
cagcaaagcgagaaggccaagaagatccgcaaaaataagtttaagaagagcaaagagaag
tgcgaagacaccacatgggcgtgttctccgacacacccagtgtccgaccccactgcttca
gattcagaggaagactactcgctgtgtgctgcaccatggtgcagagagccagagggcgac
gaggtaaactgggtccaatgtgacggcagctgcaatcagtggttccaccaggtctgtgta
ggactttctgctgagcgagcagagaaggatgactatatttgcataagctgcacacagcca
gactatgaccgaggagaatga

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