Cyclopterus lumpus (lumpfish): 117730960
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Entry
117730960 CDS
T09199
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117730960 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117730960 (nelfcd)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
117730960 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
117730960
NCBI-ProteinID:
XP_034388935
Ensembl:
ENSCLMG00005016069
LinkDB
All DBs
Position
5:complement(11990453..11996462)
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AA seq
586 aa
AA seq
DB search
MDEEYYSGGGGGGGGGGGDWEGTGEGPMDYVEGKNDGKIQEDCLQKFSSKDYIMEPAIFN
TLKTYFQSGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLI
KHFDPQKADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGY
QGEITSVSTACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAM
MSILSQEEQGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGA
LNPADITVLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAA
SVVETWKKNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVA
MGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQL
DVMEQLELKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPP
YTSDFVQLFLPILENDSIAGTIRTEGDHDPVAEFIAHCKSNFIMIN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattacagcggcggcggcggtggcggtggcggtggcggcggcgactgg
gaaggcacgggggaaggtcccatggattatgtggaagggaaaaatgatgggaaaatccag
gaagattgccttcagaaattttccagcaaggattacatcatggagcctgccatcttcaac
actcttaaaacgtatttccaatcgggtggctctccagaacacgtcatccagcttctctct
gaaaactactctgcggtggctcagactgttaatctgctggcagagtggctcatccagatg
ggtgtagagcctgctcaggtccaagagcgagtagaaaatcaccttaaaagtctcctgata
aaacactttgacccccaaaaagctgattctattttcactgttgagggagagactcctgct
tggctcgagcagatgatagcacacactacgtggagagatctcttctataagctggcagaa
gctcatccagactgcctgatgctcaacttcactgtaaagctcatttcagatgcaggatat
cagggtgagatcaccagtgtgtccacagcgtgtcagcagctggaggttttctcccgagta
ttgaggacatctttggccacgctgttggatggaggagaagaaaacctggagaagaaccta
ccagaatttgctaagatggtatgtcacggagagcacacctacctctttgcccaggcgatg
atgtccatcctctctcaggaggaacaaggcggttcagctgttcgaagaatcggccaggag
gtgcagaagtcagcgcatgagagaggtcacgatgccagtcagataaccctcgcgcttggc
acagcagcagcctaccctcgagcctgccaggcgctgggtgccatgttgtctaaaggagct
ctgaatcctgcagatatcacagtcctgttcaagatgttcagcagcatggacccgcctcct
gtggagctgatcagagtgcctgcctttctggacttgttcatgcagtcactgtttaagccg
ggatcaaagataaaccaggaccataaacacaaatacattcacatcttggcctacgctgcc
agtgtggttgaaacgtggaaaaagaacaagcgagtcaacattaataaagatgagctgaag
tcgacgtccaaggccatagagactgtgcacaacctgtgctgcaatgagaacaaaggagcc
acagagctcgtggctgaactcggcactttgtaccaatgcatccggtttccagtagttgct
atgggggttttgaaatgggtggattggacagtgtctgagccgcggtacttccagctgcag
acagaccacactccagtacatttagctttgctggacgagatctgtacatgtcaccagctg
ctgcacccgcaggtcctccaactgctcatcaagctttttgagactgagcactctcagctg
gacgtcatggagcagctggagttgaagaagactctgctagatcgaatggttcatctgctg
agtcgtggctacgtcctgcctgtcgttggttacattcgcaagtgtctggagaaactcaac
acagacatctctctcattagatattttgtcactgaggtgctggatgtgatcgcacctccc
tacacatctgactttgttcaactcttcttgcccatcctggagaacgacagcatcgcaggg
acaatccgcacagagggagatcatgaccctgtagcagagttcattgctcattgcaagtca
aacttcatcatgataaactga
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integrated database retrieval system