Cyclopterus lumpus (lumpfish): 117731006
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Entry
117731006 CDS
T09199
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117731006
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117731006
04261 Adrenergic signaling in cardiomyocytes
117731006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117731006
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117731006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
VWA_CoxE
WAK_assoc
Motif
Other DBs
NCBI-GeneID:
117731006
NCBI-ProteinID:
XP_034389009
Ensembl:
ENSCLMG00005012713
LinkDB
All DBs
Position
5:complement(14808812..14840773)
Genome browser
AA seq
1161 aa
AA seq
DB search
MFGNWRILLSRTCNTSSFLLLWILVGLNVVEVAWSQQGIPLSVVKLWASAFGGEIKSITA
KYSGSQLLQKELWAITAPRPGTNSSSVGSASAKGSSRINPKNAACLAWEESGGTRGSPRK
YGESFQTAYRKRLLGSPPCSEKYKELEKSVRVEEIDGVKLVKNLALKMEEVFRKKADATR
RLVEAAEEAHHQHEDNPDLQYEYFNAVLINEVDEEGNNVELGGEFLLEPNDHFNNLSVNL
SLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQYPGV
KWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLG
DDDFFNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGDALAEAFT
ILSDFNQTGHGSLCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAFADNL
KWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQAHKL
KDKAGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYSFAI
TNNGYILTHPDLRPLYQDGQKRRRPNYSSVDLSEVEWEDKDDILRNAMVNRRTGTFSMEV
KRTVDRGRRVLKMHNDYFYTDIKGTPFSVGVALSRGHGKYFFRGNVSVEAGLRDLEQPDV
ALADEWTYCNTEEQHEHRHLTQIQAIKLFMTGRRPHLKCDRELIQEVLFDAVVTAPLEAY
WTGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNQDFLTAEDKEGVFNADHFP
LWYKRAAEQVPGTFLYSVPFGTALDNRSVVLASTAIQLLDDRKSPIVAAVGIQMKLEFFQ
RKFWTACRQCTALDGKCSISCDNADINCYLIDNNAFILVTEEQSQTGLFFGEVEGAVMNK
LLQMGSFKRIPLYDYQALCRDYARSSDSARTLSDPFTVVKWLLAELVMFLLEFNLYSWWN
VDLSVKAQRSRGKNTMVPCDTEYPAFVSERTIKETTGNIDCEGCIRSFVIQQIPSSNLFM
VVVDNKCDCSSSPPVTMDPNEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMECGSA
TRLSSPLTAALLPLIAATISR
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaactggagaatcctgttgtcgcgcacgtgcaacaccagcagcttccttttg
ctttggatcctcgtcggcttgaacgtggtggaggtggcgtggtcccagcaagggatccct
ctgtcagtcgtaaagttatgggcttcagcatttggtggagaaattaaatccatcactgca
aaatattctggatcccaactactgcaaaaggagctgtgggccatcacagcgccgcggccg
gggaccaactccagttctgtgggcagtgcctcggccaagggcagtagcaggattaatcct
aaaaacgctgcatgtcttgcgtgggaggaaagcggaggaaccagaggaagtccacgcaaa
tatggggagagctttcaaactgcatatagaaagcggctcctgggttcacctccttgctct
gagaaatataaagaacttgaaaagtcagtcagagtggaagaaattgatggtgtgaaactg
gtcaaaaacctggctttgaagatggaggaagtgttccggaaaaaagcagatgccaccagg
cggctggtggaggcagcagaagaagcgcaccatcagcacgaggataatccggacctgcag
tacgagtactttaacgccgtactgatcaatgaagtggacgaggagggcaataacgtagag
ctcggaggagagtttcttctagagcccaacgaccatttcaataacctgtcagtcaacctg
agcctcagtgtggtgcaggtgcccaccaacatgtacaacaaagatcctgacatagtgaat
ggagtttactggtccgaggctctgaataaagtatttgtagataattttgagagagaccca
acactaatctggcagtactttgggagcgctaaaggtttcttcaggcagtaccctggagta
aagtggcatccagatgaacatggcgtcattggctttgactgtagaaacaggaagtggtac
atccaggcagcaacgtctccaaaggatgttgttatcttagtcgatgttagtggaagcatg
aaaggactgaggctgaccatcgccaggcagactgtctcctccatattagacacacttgga
gatgacgacttcttcaacatcattgcatacaatcaggagattcactacgtggagccttgt
ttgaatggcacactggtccgagccgacagaaccaataaagatcatttccgtgaacatctg
gacaagctgtttgccaaagggatcgggctgttgggcgacgctctggccgaagcattcacg
atcctgagtgattttaatcaaactggacatggcagtttgtgcagccaggccataatgctt
gtgactgacggggcgactgaaatgtatgacgatgtttttgagaagtacaattggccagaa
agaaaggtgcgaattttcccatacctgattggacgagagtctgcatttgctgataacctc
aaatggatggcgtgtgccaacaaaggttatttcagtcagatctccaccttagcagatgtt
caggagaacgtgatgaggtatcttcacgtcatgagccgcccaaaggttattgaccacgag
cacgacacagtgtggactgaagcttacgtggacagcgctctttcccaggctcataagttg
aaggacaaagcgggccccagtctgatgactacagttgccatgcctgtcttcagcacaaag
aatgaaacgaagaaccagggaattctgttgggggtcgtaggaacagacatccctctgcag
gagctgatgaagctcatccctaaacatatgttaggaatccatgggtactcatttgcgatc
acaaacaatggctacattctgactcatccggacctcaggcctttgtatcaggatggtcag
aagaggagaaggccaaactacagcagtgtggatctctctgaggtggaatgggaagacaaa
gatgatattctacgcaacgccatggtgaacaggagaacagggacgttctccatggaggtg
aagaggacggtggatagagggaggcgtgtcctgaagatgcacaatgactatttctacacg
gacataaaaggaacaccattcagtgtcggagtggctctctccagaggtcatggaaagtac
ttcttcagaggaaatgtatcagttgaagcagggctccgtgatctggaacagccagatgtc
gccctggcagacgaatggacttactgcaacacagaggagcagcatgagcaccgtcatctg
acccagattcaagccatcaagctctttatgacgggccgcagaccccatctcaaatgtgac
agagagctcatccaggaggtgttatttgatgctgtggtcactgctccactggaggcctac
tggaccggactggccctcaacaagtcagagaactcagacaaaggagtggagatcgccttc
ctgggtacacgcaccggcctgtcgaggactaacctgtttgttcccgccgatcagctctcc
aatcaagatttcctgacagcggaggacaaggagggtgtgtttaatgctgatcacttccct
ctgtggtacaagcgagctgcagagcaggtccccggcacatttctttactccgtccccttc
ggcacagctttagataataggagtgtggttttggccagcacagcaattcagctcctcgac
gacagaaagtctccaatcgttgcagctgtaggtatccagatgaagcttgagttctttcag
aggaagttctggacggcctgcagacagtgcacagctctggatggaaaatgtagcattagc
tgcgataatgcggacattaactgttatcttattgacaacaatgccttcattcttgtcaca
gaggagcaatctcagacagggctcttctttggagaggtggagggtgctgttatgaacaaa
cttctccaaatggggtccttcaaaagaatcccactgtatgattatcaggccctctgcaga
gactacgctcggagcagcgacagtgcacgcactctatcagatccttttactgttgttaag
tggctcctggctgaacttgtcatgtttctgctagaatttaacctgtacagctggtggaac
gtggatctttcagttaaagctcagcgatcccggggtaaaaacacgatggtgccgtgtgat
acggaataccctgcctttgtctctgaacgcaccatcaaagaaacaaccggcaacattgac
tgtgagggctgtatcaggtcttttgtcatacagcagattcccagcagcaacctcttcatg
gttgttgtggacaataagtgtgactgcagcagttctcctccagtaaccatggatcccaac
gagatcatgtacaacgagtcactaaaatgtgaccgactgaagtttcagaaggacagaaag
aagcctgaatcgtgtcatcctttccaccctgaggaaaatgccatggagtgtggttcggca
acacgactctccagtcctctaacagcagctctgctccctctgatagcagcgaccatcagc
aggtga
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integrated database retrieval system
