Cyclopterus lumpus (lumpfish): 117731036
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Entry
117731036 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 5-like
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117731036
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
117731036
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_9
PH_11
FYVE_2
PH_20
Motif
Other DBs
NCBI-GeneID:
117731036
NCBI-ProteinID:
XP_034389049
LinkDB
All DBs
Position
5:13309625..13326165
Genome browser
AA seq
1457 aa
AA seq
DB search
MNTDCTKPSVAPKPRCVCHTSLKLPSPLMSAARGPKPFIAPKPKVTPELNGNQGGCFNGG
LLNSDGEVDDEHETANSLNKVVADGLPAEKQFNVYILKPPQHNVHGSEDGEATEEEKEEE
DITHKVDEDWKLTDSALSEEVDSLETLWVSDAGLTAESEDAVEMVDTDVTEDIEAEGCDA
GEALADTDGLSVGDISVNSIDEEACYSAENGDMRERQENLQINEDETGDCTADDLTESLT
DEPYLISNGNMKDTDTQDGEEKEEEPSPGSGITCNILTFQCGHKVKEKGENQQNVSFYDF
KHEDQRHAAVEDGPPHEPYYISSQDIINREMISRNNKTHGLPQSPLSSVNNSGVSAGKYQ
KTAENGQTECVSSEDYVEVGNPLEYSSYNRDENKARAYLKITEELKAQTAEALFDHVDCQ
PRFRLVSISVPTDTDTSLTSSLSESQLLSPSDSDVFEEDLEGHIVPFLERTTDTEPDISD
EHVYEEPGHSLEGEKVFPSHKRTAEMLSCSLSHRINNHVAELGVQFVQRPYMSGIGQPAL
SSSPMISSTRHKRYSKPQYLSLYPRSISMEGQDMPLGVYYREGSPRQGGAICSSGSFSRC
SPLSSSGLSTPTSVVDIPPPFELAYITKRPITKSSPSLFIEGDSSEKNRKKKSSIKRFLM
LKFRRKTDSKPVDANPSLFKSSTESYHHTPSRLLDLERRSFSSSPQLISRSASKPHVSSE
PASTFLLYKERKGNSVAFLNRSVVRVESFEERSCVPFTPLPLTKPRSISFPNADTSDYEN
VPAISSDYENLQVPQRRPVCQAPFTGFFDRTSRVMSSANDTDGYVDMSSLPGFKNTTQSP
EQETESAYTEAYNVCSVAVSVDDVRGETAGEEDQGRTSEEEEGGLDSIYDRQPDGRSRAF
YIAKELVDTERLHVKALKLLQEDFREAVGAAVGDEGDPVLDEERLREILNELPDVYTLHR
RILSELENRIRHWEESQRIADIYLSRKAEFLVFTTYIGHYDRSMSLLEDSCRASPAFAAI
VHQFEQQSPAGVKVSLKHQLLQVIVRVAQYRMLLTDYLNNLSPDSKEYKDTQAALAVVSD
IADQANDSLKHGENLLRLVNIEYSVRGLQDLLQPGRVFVKEGTLMKVSRKSRQPRHLFLM
NDVLLYTYPQQDGKYRLKNTLLLTGLKVSKPFVENVQNALRIEGMDISITLSARGGSFIE
REDWFYTLSRTVTEHTRGSSINSCSGEARDHLRLTLGEKAPTLVPVSEVMMCMNCTSDFS
LTLRRHHCHGCGRIVCWSCSRNRYXMKYMKDRMXKVCDHCYNELKKRGGDVSALSGKSSP
RPNRSSRPLSAVFQNIHPPNIWRHRKGTASFTQVTVSEEGSISGTLQRSKTSKRNWKRLW
FLLRDKVLYTYRAQEEKVASESLPLLGFTVKLPDKREEEEANVFQLYHKNTLYYSFRAED
NYTAQRWVNAMEEATVL
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagactgcaccaagccttctgttgctccaaagccaagatgtgtttgtcacacc
agcttaaagctgccatcccctctcatgtccgcagccaggggtcccaaaccttttatagcc
ccaaaacctaaagtcacaccagagcttaatggtaaccaaggaggatgcttcaatggcggc
ttactaaattcagacggcgaggttgatgatgagcacgagacagcgaacagtctcaacaaa
gttgttgcagacgggttaccagcagagaaacaatttaacgtctacatcctcaaaccacca
caacataatgttcatgggtcggaggacggagaggcgacagaggaggaaaaggaagaggaa
gacattacacataaggtggacgaggactggaagttaactgatagtgctttatcagaggag
gtggactccctggaaacactttgggtcagtgatgctgggctcacagctgagtctgaggac
gcagtggagatggttgacacagacgtgacggaggacatagaagccgaaggttgtgacgca
ggcgaggcgctggccgacacagatggcctctcagtgggagacatctctgttaatagcatt
gatgaggaggcatgctattctgctgaaaatggagacatgagggagaggcaggagaatctc
cagatcaatgaggatgaaacaggtgactgtacagcagatgatttaactgagtccctcaca
gatgaaccttatctcatcagcaatggaaacatgaaggacactgatacacaagatggagag
gagaaagaagaagaaccttctcctggtagtggtatcacttgtaacatcctaacatttcaa
tgtggccataaagtgaaggaaaagggcgaaaaccaacagaatgttagtttttatgacttt
aaacacgaagaccagagacatgccgctgtagaggacggtcctcctcatgagccttactac
atctcatcacaggacattattaacagagagatgatatcaaggaataacaaaactcatgga
ctaccacagagtccactttcatctgtaaacaacagtggagtatcagctgggaaatatcag
aaaacagcagagaatggacaaacagagtgtgtgtcctctgaggattacgtggaggttggt
aaccctcttgagtacagcagctacaacagggatgaaaataaggcgagagcttatctgaaa
ataactgaagaactcaaagctcagacagcggaggccttatttgatcatgtggactgccag
ccgaggttcaggcttgtatccatctcagtgccgaccgacacggatacctcgctgacatct
tctctctcggaaagccagctgctttctccaagtgactcagatgtctttgaggaagaccta
gagggtcacatagtgcctttcctggagcgcaccactgatacagaaccggacatcagtgat
gagcatgtctatgaggaaccagggcacagtttagagggggaaaaggtttttccttctcat
aagaggacagcagagatgctctcctgctcactgtcacatcgcattaataatcatgtggct
gagttaggagtgcagtttgttcagaggccctacatgagtggaattggacaacctgcactg
agcagcagcccaatgatcagctcaacgcggcacaagcgctacagcaaacctcaatatttg
tccctgtacccacgctccatctctatggagggacaggacatgcctctaggtgtctactac
agggaaggatccccaagacaaggaggtgccatttgttcatcaggaagcttctcacggtgc
tcaccgctatcatccagtggcctgtccactccgacatctgtcgtggatattcctcctccg
tttgagctggcctacatcaccaagaggcccatcacaaagagttccccttcacttttcatc
gaaggagactcgtcggagaaaaacaggaaaaagaaatcctccattaagcgtttcctgatg
cttaaatttaggcggaaaacagatagcaagccggtggatgcaaacccgtccttgtttaag
tcctcaacagaatcctaccaccacacgcccagcagactgctggatctagagagacgcagc
ttcagtagctctccacagctcatatcacgctctgctagtaaacctcatgtttcttcagag
ccggcctccaccttcttgctctacaaggaaagaaaagggaactctgtggcctttctcaat
cgcagtgttgtccgggtcgagtcctttgaagaacggtcctgtgtgcctttcacacctctt
cccctgaccaagcctcgctccatctccttccccaacgcagatacctcagactatgagaat
gttcccgccatcagctcggactacgagaaccttcaggtcccacagcggaggcccgtctgc
caggcgccgttcacaggcttctttgaccgtaccagtcgggtgatgtcctctgccaatgac
actgacggttatgtggacatgagcagcctccctggtttcaagaatacaacgcaatcacct
gaacaggaaacggaaagtgcctatacagaagcctacaatgtgtgctcggtggctgtctca
gtggatgacgtcaggggagagacagcgggtgaagaagaccaaggacgcacctctgaggag
gaagagggaggtttagacagcatttatgatagacagcctgacggacgatccagagccttt
tacatcgcgaaggagctagtggatacagagagattacacgtgaaagccctcaagctcctc
caggaagactttcgggaagcagtgggggcagcggtcggcgacgagggggatcctgtgttg
gatgaagagaggcttcgagagattctcaacgagctgcctgatgtttacaccctacaccgc
cgaatcctcagcgagctggagaaccggatccgacactgggaggaaagccagaggatcgca
gacatctacctgtccagaaaagcagagttcttggttttcaccacttatatcggccactac
gatcgcagtatgagcctgctggaggacagctgccgagcctcccctgcctttgcagccatt
gttcaccagtttgagcagcagagtccagctggggtaaaggtgtctctgaaacatcagctg
ttgcaggtcattgtgcgtgtggctcagtaccgcatgctcctcactgattacctgaacaac
ctctcccctgattccaaggagtataaagacacccaagctgctttagctgtcgtttctgac
attgcagatcaagcaaatgacagcttgaaacatggggagaacttattgcgcctggtcaac
atagagtacagtgttcgtggcctgcaggatctgctgcagccgggcagggtctttgtgaag
gagggcaccctgatgaaggtcagcaggaagagtcgacagccccgccatctgtttttgatg
aatgatgtgttgctgtacacctaccctcagcaggacgggaaatacagactgaagaatact
ctgctactcactggtttgaaggtcagtaaacccttcgtggaaaatgtccaaaatgcactg
aggattgaaggaatggacatctccatcactttgtctgccaggggtggttcctttattgaa
agagaggactggttttatactctgagtcgcactgtgactgaacataccaggggatctagc
atcaacagctgctcaggagaggccagagatcatctgcggctgactctcggagagaaagcc
cccacgcttgttccagtctcagaagtgatgatgtgcatgaactgcacctcagatttcagc
ctcactctccgtagacaccattgccacggctgcggaagaattgtttgttggagctgctca
aggaaccgatatncaatgaaatacatgaaagatcgcatgngcaaagtgtgtgatcattgt
tacaatgagctaaagaagagagggggagacgtgtctgctttgtcaggtaagagtagccct
cgtccaaaccgctccagtcgtcctctttctgccgtgttccaaaacattcatcctccaaac
atctggagacatcggaaaggcactgcttccttcacccaggtgacagtgtcagaggaaggc
tccattagtggcactctacagcgcagcaagacgagcaagaggaactggaagaggctgtgg
ttcctccttagagacaaggtgctttacacctaccgagcccaagaggagaaagtagcatct
gagagtttacctctgctgggtttcacagtgaagctacctgacaagcgagaggaggaggag
gccaacgtcttccagctttaccacaaaaacactttgtattactccttcagagctgaggac
aactacacagcccagaggtgggtaaatgccatggaggaagccaccgttttatag
DBGET
integrated database retrieval system
