Cyclopterus lumpus (lumpfish): 117731064
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Entry
117731064 CDS
T09199
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117731064 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117731064 (lrrn1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
Ig_2
LRR_EndoS
V-set
ig
fn3
LRR_Zer-1
Pur_ac_phosph_N
Peptidase_M73
LSR
Sp38
Fn3_ELFN
LRRNT
Motif
Other DBs
NCBI-GeneID:
117731064
NCBI-ProteinID:
XP_034389098
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All DBs
Position
5:5338216..5350391
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AA seq
717 aa
AA seq
DB search
MARRRLDCLLLGQVFASLMLVSIGLSYVQSNDCPQLCVCEIRPWFTPQSTYREAITVDCN
DLRLTRIPGNLSSDTQVLLLQSNYIARTNDELEQLFNLTELDLSQNNFSIIRDVGLFNMS
QLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINTISANAFFGLHNLLRLHLNSNKI
KTISSQWFESTPNLEILMIGENPVVGIMDFNFKPLGNLRSLVLAGMDLTDVPGNAFVGLD
NLESLSFYDNKLVRIPQRALQKLPNLKFLDLNKNPVHKIQEGDFKNMVRLKELGINNMGE
LVSVDRYALDNLPELTKLEATNNPKFSYINRQAFRDVPALESLMLNNNALNALYESTVDS
LPNLREISIHSNPLRCDCVIQWMSSNKTTVRFMEPLSMFCAMPTEVRGLHVREVLQNNLA
NQCLPLISHDTFPSHLNLDIGMTLDLDCRAMSQPEPEIYWVTPMGNKVMMDTLSDKYSLS
NEGTLRISHIQVEDSGRYTCVAQNSEGADTRVTAIRVNGTLLDSTQLIKIYVKQTQSHSI
LVSWKINSNVMTSNLKWSSAIMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVS
NIHQQTQKSCVNVTTKQATFAVEISDQGTNTALAAVMGTMFAIISLASLGVYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWEADSEKEKEGSAETKASQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctagacggaggttagactgcttgcttctgggccaggtgtttgctagcctgatgctg
gtatcgataggactatcctacgtccagagcaatgattgtccccagctatgtgtatgtgag
atccggccctggtttaccccccagtccacctacagagaggccatcactgtggactgcaat
gaccttcgcttaacacgtatcccgggaaacctctccagtgacactcaggttctcctccta
caaagcaactacattgccaggaccaatgatgagcttgaacagctcttcaacctgactgag
ctggacttgtcccagaacaatttcagtattattcgagatgttggccttttcaatatgtcc
cagctcaccacgcttcatctggaggagaaccagatcacggaaatgccagattactgtttg
caggacctcagtaacctgcaggagctctacatcaatcacaatcagatcaacacaatctct
gccaatgccttctttgggctccacaacctactcaggcttcacctcaactccaacaaaatt
aagaccatcagcagccagtggtttgaatccacacccaacctggaaatcctcatgattggg
gagaatcctgttgttggaataatggactttaactttaagccactgggcaatcttagaagt
ctggttttggctgggatggatttgacagacgtccctggaaatgcctttgtgggacttgac
aatcttgaaagcctctctttctatgacaataagctggtccgaattccccagagagccctc
cagaaactaccgaacctcaagttcttggatttgaacaaaaacccagtgcacaagattcag
gaaggagatttcaagaacatggtgagactgaaggagttgggtataaacaacatgggagag
ctggtttctgtcgaccggtacgcgctggacaatcttcctgagctcacaaagctggaggca
acaaacaatcccaagttctcttacatcaaccgtcaggcttttcgggatgtcccggccttg
gagagtctaatgctgaacaacaacgccctgaatgccctctatgagtccacggtggactct
ctccccaacttgcgtgagatcagtatccacagcaatcctctgcgctgtgactgcgtcatt
cagtggatgagctccaacaaaaccactgtccgtttcatggagcctctgtccatgttttgt
gccatgccaacagaagtaaggggtttgcatgtgcgggaggtgctgcagaataatttagca
aaccagtgcctgcccctgatttcccatgatacatttcctagccacctcaaccttgacatc
ggcatgaccttggacttggactgcagagccatgtctcagcctgaacctgaaatctactgg
gtgacaccaatggggaacaaggtaatgatggacaccctatctgacaagtatagcctcagc
aatgaagggacattgagaatttctcatattcaagttgaagactctggcagatacacctgt
gtggctcaaaactcagagggagctgacacaagagtgacagctatacgggtgaacggcact
ctgttagacagcactcagctaataaagatctacgtcaaacaaacacaatctcactctatc
cttgtctcctggaaaataaattccaatgtgatgacctctaacctcaagtggtcctctgcc
atcatgaaaatagacaacccacatattacttacactgccagggtacccgttgatgtccat
gagtacaaccttacacatttacaaccagcaactgagtacgaggtgtgcctcaccgtctcc
aacatccaccaacaaacacagaagtcgtgcgtgaatgtgacgacgaagcaggcaaccttc
gctgtggaaatatccgaccaggggaccaacactgctctggcagcagtcatgggaacgatg
tttgccatcatcagtctggcctctctgggagtgtacattgccaaaaggtggaagaggaaa
aactatcaccattccctgaaaaaatacatgcagaaaacctcgtcaataccgctaaacgag
ttgtaccctcctcttatcaacttgtgggaggccgacagtgagaaggagaaagagggctca
gccgagaccaaagccagtcaggtggacaccacacgcagctattacatgtggtga
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