Cyclopterus lumpus (lumpfish): 117731065
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Entry
117731065 CDS
T09199
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117731065 (ap5b1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117731065 (ap5b1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_N
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
117731065
NCBI-ProteinID:
XP_034389099
Ensembl:
ENSCLMG00005019028
UniProt:
A0A8C3AFL0
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All DBs
Position
5:complement(7730543..7734513)
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AA seq
955 aa
AA seq
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MAANWAERISAFSRSPSVFLSRTTAEAFLAELLRELRDDRASYSVKVLLLSPLCEHPTLL
CPSDSVGEETALELMSVLDQCPPKSVQFRCHLLLALTTVLVCTACMSVRSCVSQDFLDLL
LQMAQDTGDLHGDGALRSLRATACDCLRELEACSPGLLSQRLELLGGLRQRETSRLHQAY
AGLHTLVLRNAVYRLTQDTGAGAEHLKALLEGNTSVAWEAELDSGPMSDKDPSAILSSLI
LGPMGTVPTLQTGPDCKELRSVLSSLLEESYLLTPLCQAALLHRLTEVVAMVPGVPPAVF
RAQLLRLLGTSEVCLLHATLLLKCAFTDSLFSAEDEAFILQRLVVLSQHPLLGTPEKLFY
MDCLLHFPENRPIGCGGDGDETLPVLLTPRLASALAPTVFNDGATALARLNLLSLVYLEE
AEEGEGEESRGLAYLYEHLTSLLRVVANGGSREIVVTFFRAAFLFLFSFCHVESYCRSLT
EELCKLYLRHTHLAPHIVNLADRAQDKLAESDWAVGFLRALQGVIADAPPARLTPRELSW
HLKTLARVAEEGEIHQHSTVSFLSSVIAPSPSSLCTSGDWRLGNGLLGVCRRLLVHPSLD
SLLLPLADILLHLTCHYGDTDIQDHARLYYTLLTTLSQEKLAGVLAQGSAEGGRQVTKRS
LSCIMAESEGLASALTIHQTEKSIFGLIEARSEPPQGETQTEEVSDPHQNDTLPTEANAA
LEEYRAQFLVPGFASEITLNYRLTRIDSDSHFDQLFSIRLHFGLTDDHYEELGDISVPSL
VRGRPPPEVRLRLKPRRPYPTTLHASAIFTTEDGLSWLTVLPHIHVAFRQVFAPLPAPPA
WGNSSRRCLFEGLWDEMGAESGEDPADCVTSLFCCRLKEGALTDLVEKHFLPYLISDLSE
EEEVKVLFFLPPRSHVLLKIKPGDPVHFNVAVDNWQLLRHLNSYLLTITSSQEDT
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaactgggccgagaggatctccgctttctcccggagtccgtctgtcttcctc
tccaggacaacagctgaggctttcctcgcagagctgctccgtgagctccgagatgacaga
gccagttacagtgttaaggtcctcctgttgtccccgctatgcgagcatccgaccctgctg
tgtccctccgactctgtgggcgaggagacggccctggagctcatgtcggtgttggaccag
tgtcctcccaagtccgtccagttccgctgccacctcctcctggccctcaccaccgtgctc
gtctgcaccgcctgcatgagcgtccgctcctgtgtgtcccaggacttcctggacctgctc
cttcagatggcccaggacaccggggacctgcacggggatggcgctctgcgctccctccgg
gccacggcctgcgactgcctgcgggagctggaggcctgctccccgggcctcctctcgcag
cgcctcgagctcctgggcgggctcaggcagcgggaaacctcccggctccaccaggcctac
gcgggactccacactctggtgttgagaaacgctgtgtatcggctcacccaggacactgga
gctggcgctgagcacctcaaggcgcttctggaaggaaatacatctgtggcgtgggaggcc
gagctggactcgggcccgatgagtgacaaagacccctcggccatactatcgtcccttatc
ctgggacccatgggtactgtgccgaccctccagactgggcccgactgtaaggagctgcgt
tcggtcctttcctcccttctggaggagtcctacctcctcactcctctgtgccaggctgca
ctgctacacagactgacagaggtagttgccatggtgcctggtgtccctccggccgtattc
agagctcagctgctgcgactgctgggcacgagcgaggtttgcctcctccacgccacgctg
ctgttgaagtgtgcgttcaccgacagcctgttcagcgccgaggacgaagctttcatcctc
cagcggctggtcgtgctctcccagcacccgctgctgggtacgcccgagaagcttttctac
atggactgcctcctgcacttccccgagaaccggccaatcggctgcggcggcgacggcgac
gagaccctccccgtgctgctaaccccgcggctggcctcggccctggcgcccaccgtgttc
aacgacggcgccacagcgctggcccgcctcaacctgctgtccctggtctacctggaggaa
gcagaggaaggggagggggaggaaagcaggggcctggcctacctctatgagcacctcacc
tcgctgctgcgcgtcgtggcaaacgggggcagccgggagatcgttgtcaccttcttcagg
gccgccttcctcttcctcttctccttctgccacgtggagagttactgtcgcagcctgaca
gaggagctgtgcaagctctacctccgccacacccacctagcaccgcacatcgtcaacctg
gccgaccgggcccaggacaagctcgctgagtctgactgggcggtggggttcctgagggcc
ctccagggagtcatcgccgatgccccgcctgctcggctcaccccgcgagaactgagctgg
cacctaaagacactggcccgtgtggcggaggagggagagattcaccagcacagcaccgtc
agcttcctatccagcgtcatcgctccgtctccctcctctctgtgcacctccggcgactgg
cgcctgggcaacggcctgctgggggtttgccgccgcctcctcgtccaccctagcctggac
tcgctgctcttgcctctggccgacatcctgctgcatctcacttgccactacggtgacacg
gacatccaggaccatgcccggctctactacaccctcctgaccacgctgtcccaggagaag
ctggccggggttctggcgcagggttctgcagagggagggcggcaggtcacgaagcgatcg
ctgtcctgcatcatggctgagagcgagggcttggcgagcgcgctgaccattcaccagacg
gagaagtcgatattcgggctaatcgaggcccgttctgagccgcctcaaggggaaacacaa
accgaggaagtaagcgacccccaccagaatgatactttgccaacagaggccaacgcagct
ctggaagaatacagagctcagttcctcgtccccggattcgcctcagaaatcaccttaaac
taccggcttactcgcatcgacagcgactcccacttcgatcagctcttcagcatccgcctc
cacttcggcctcacagacgaccactacgaagagctgggcgacatcagcgtcccgagtctg
gtccgggggaggccgccgcctgaagtcaggctgagactgaagcccaggcgtccctacccc
accacgctccacgccagcgccatcttcaccactgaggacggcctctcctggctcaccgtc
ctgccgcacatccacgtggccttccggcaggtcttcgcgccgctgcccgcccccccggcc
tgggggaacagcagcagacggtgcttgttcgagggcttgtgggatgaaatgggtgcagaa
agtggagaggacccggcagactgtgttaccagcctgttctgctgccggctgaaggagggg
gctctcactgacctggtggagaaacacttcctcccctacctcatatcggatctgtccgag
gaagaagaggtcaaagtgctcttcttcctcccaccgcggtctcacgtgctgctgaagata
aaaccgggggaccctgtgcacttcaatgtcgccgtggataactggcagcttctgcgtcac
ctaaattcttatcttctgacaatcacgtcctcacaggaagacacttga
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